KEGG   Aureococcus anophagefferens: AURANDRAFT_72456
Entry
AURANDRAFT_72456  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K15181  negative elongation factor C/D
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AURANDRAFT_72456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaf03021]
    AURANDRAFT_72456
Transcription machinery [BR:aaf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     AURANDRAFT_72456
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 20228714
NCBI-ProteinID: XP_009040581
JGI: Auran1_72456
UniProt: F0YJJ8
LinkDB
Position
Unknown
AA seq 539 aa
MSDANGLPYNDDILPPHPFVPSCGNPPSPVSSSASLGADTGEATSLRNARQLLDAKDAIL
EPGLWATMTEFVRQGGDSGEVPLLLARGLIGYPQIARLLSSWLGIAGVSQAEVEAIAWDA
VKKEVRKRLDVRGLDDCTVRCRTSRPKFLDALLETRRGRRLVVDLYGFAARRSDYGRSDL
LSHCLREIAASGYIAELLEAATLDLCEDWYLFEVALVDAIVRAARPNDHRASSVERLVLD
VLRCCGSRLEAQCYANSVLETLDFAIGGKDNLLWRYVRQDKRLVTNPPLLRLMNIPRQIP
LAQVLRDSVLSLARHPTVTTLNVVRAAYHATPYVAFLRVPKVAAALFQLAFDPVLAIPNS
INGAADLIAAVATVPPKAGDNFGFTATDEDCISATYAATAACVSAAAHACLSEALSANGQ
QSTGELLLSATSGCAAARHGILVWIAKIVEDPTWMRTRPRSFASLTFGILRTAARSPRAR
RRIFNVYQRIVDAPSRMGVATHYHTGSQPSRLSEPYDSSDVSKAVVFGLVDLAADWSCV
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgtccgacgcaaatggcctgccatacaacgatgacatattgccaccgcacccgttcgtg
ccatcatgtggaaatcctccctcccctgtgtcttcatcagcttccctaggggcggacaca
ggggaggctacaagtctaagaaatgccaggcagctcttggacgcgaaggatgcaattctt
gagcctggactatgggcgacgatgacggagtttgtacgtcaggggggtgacagcggcgaa
gttccgcttctccttgcacgtggtctgataggatatccgcagatagctcgtttgcttagt
agctggcttgggattgcgggtgtttcccaggccgaagtcgaggccatcgcttgggatgca
gttaaaaaagaggttagaaagcgactcgacgttcgtggacttgatgattgcacagtgaga
tgccgtacctcgcgaccaaaattcctagacgcattgcttgaaacgcgacggggtcggcgc
ttggtcgtcgacctctatggctttgcggcgagacgaagcgattatggtcgaagcgatctg
ttatctcattgcctacgagaaattgctgcgagtggttatatcgctgaactccttgaggct
gcgaccctcgatttatgtgaggactggtacctttttgaggtggctctagttgacgccata
gtacgcgctgcaaggccaaatgaccatcgtgcctcatcagttgagcgtctcgtacttgat
gtactccggtgttgcgggtcgcgcttagaggcacagtgctatgcaaatagcgtcctcgag
actcttgacttcgcaattggcggcaaagacaatctcctttggcgctatgtgcgccaagac
aagcgcctcgtgaccaaccccccgctactccggctcatgaacattccacgccagattccc
cttgcacaagtgcttcgtgactcggtcctgagcctcgcacgccatccaacggtgactact
ctcaatgttgtacgcgctgcataccatgctacgccatatgtggcatttctgcgtgtaccg
aaggtggctgcagcccttttccagcttgcctttgatcctgtgttggctatacccaactcc
atcaatggtgcggcagatctcattgctgccgtggcgaccgtaccccccaaagctggtgac
aattttggcttcaccgccacagatgaggattgcataagtgccacgtatgctgcaaccgcc
gcgtgtgtttctgcagcggcacacgcatgcctcagcgaggccctttctgctaatggccaa
caatcgacaggagaactgcttctttccgctacctctggctgtgctgcggcacgtcacgga
atccttgtatggatcgccaaaattgttgaggacccaacctggatgcgcacgcgtcctcgc
tcattcgcatcgctgacttttgggattctacgcactgcagcgcgttcaccacgggcacgg
cgacgtatcttcaacgtgtaccaacgcatcgtagatgcgccgagccgcatgggcgttgct
actcactaccatacaggatctcagccctcgcgtttatcagagccatacgattctagcgat
gtcagcaaggctgtggttttcggtcttgttgatcttgcagcggactggagttgtgtctaa

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