Aureococcus anophagefferens: AURANDRAFT_72554
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Entry
AURANDRAFT_72554 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03430
Mismatch repair
aaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURANDRAFT_72554
03460 Fanconi anemia pathway
AURANDRAFT_72554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_72554
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
AURANDRAFT_72554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
HATPase_c_2
Motif
Other DBs
NCBI-GeneID:
20228763
NCBI-ProteinID:
XP_009041044
JGI:
Auran1_72554
UniProt:
F0YKV0
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MLTNIAKIDTASARKLSSGQVVVDLAGAVKELLENALDAGATSIELRINDDGGGAEIECA
DNGHGIAHRVESISELRQRSQVKICIAPRDFALVAARSATSKLVNFEELRTVQSFGFRGE
ALASLRELAGEVLVVTRTSADAVGARLSFQRDGILKSSTPHARSVGTTVTVRGLFDCAPV
RRADLARRWKWHVSRALRTVQAHALVAVGCRLRLTLVSGGGATRRTAIAVQAPRSLRESA
SALFGHAFARSLEEVSFDLRGGEDCSLAVIGLMSRAGGFDAPGPRGGGGDRQFLFVNGRP
IDAPRVSRCIGDVWRSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGRGAV
PLPATSNLLVAALRIALHDLWEPSRGSFAGGRSLAPHVAPSTTPDTEAPCSLVLPIAVPS
CVTSTATATNAPAREAMLVVPPTLRPTQRNSDTIAVAQVIALSPWQAARAHIDWNCAVAP
ARLHASSVFGTLAVQSRCGHGHRTVQIDRRPGGNVPTAALAKADFSAMEALGQFNLGFLV
CRLGDHLFLVDQHAADEKFRYEALWRDTRVDTQPLLAPLSLDLGATEELALLERRCTVER
VGFRLAVNDLAPPGRRVAVISASALSVLFCGSVRLPSPNQITLVSGSGL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaacattgcgaagatagacaccgcatctgcgaggaaactgagctctgggcag
gttgtagtggatctcgctggcgcggtgaaggagctcctggaaaatgccctggatgccggt
gcgacgtcgatcgagttgcggatcaacgatgacggggggggcgcagagattgagtgcgcg
gataatgggcatggtatcgcgcaccgcgtggaatccatcagcgagctgcgccaacgcagc
caagtcaaaatctgtatagcgccgcgcgactttgctctcgtcgccgcgcggtcggcgacg
tcaaagttggttaactttgaggaattacggactgtgcagagttttggatttcgtggcgag
gcgctcgcttctctgcgcgagctcgcgggggaagtcctcgtcgtcacgcgaacgtctgcc
gacgccgtgggcgcgcgtctgagcttccagcgggacggtatccttaagagctcaactccg
cacgcacgaagtgtcggcacgactgtcacggtgcgcgggctcttcgattgtgctcctgtt
cgtcgcgctgatcttgcgcggcgctggaagtggcacgttagtcgcgcacttcgcacagtc
caagcgcacgcgctcgtcgccgttggttgccgcctgcgactcaccctcgtcagcggcggt
ggcgccacgcggcggacagcaatcgccgtgcaagcgccgaggtcgctgcgcgagagcgct
tcagcgctctttggacacgcgttcgcccgatcgctcgaggaggtcagcttcgatcttagg
ggaggtgaggactgctccttggctgtcattggcctcatgtcgcgtgctggtggcttcgat
gcgccagggccgagaggcggcgggggtgatcgccagttcctctttgtcaacggaaggccc
attgacgcacctcgcgtgtctcggtgcatcggcgatgtgtggcggagtgtcgagggcgat
cggcgcggtcgtccagccttcgtccttgacattcgcgtccctccaagcgccgtagacgtc
aacgtttccccagacaagcgtgatgtcgttctggacgacgaaactgggcgcggcgcggtg
cccttaccggctacttcaaatttgcttgttgccgcactgcgtatcgctctccatgacctc
tgggagccatcgcgcgggagctttgcaggtggcaggtccctcgcaccgcacgtcgcgccg
agtaccacgcccgatacggaagccccctgctccttggtgctccccattgcggtcccatca
tgtgttaccagcactgccactgccacaaatgctcctgcgagggaagcaatgctcgttgta
ccaccaacgctgcgcccgacgcaacgcaacagcgacacgatcgcggtcgcgcaagtcata
gcgctttccccatggcaggccgcaagagctcacattgattggaactgcgccgtggcacca
gcgcggctgcacgcttcttcggtattcggcaccctcgcggtgcagtcgcgctgtggccat
ggccaccggaccgtacagattgatcgacgtccgggcggcaacgtgccaaccgcagcgcta
gccaaggctgatttcagtgccatggaggcgctcggtcaatttaatcttggctttctcgtg
tgtcgcctcggcgatcacctgttcctcgtcgatcaacacgcagcggacgaaaaattccgc
tatgaggcgctctggcgcgacactcgcgttgacacacagccactcctggcacccctcagc
ctcgacctcggtgccacggaggagctagcgcttcttgagcgccgatgcaccgtggaacgc
gttggcttccgcctcgccgtcaatgacctcgcacccccgggacgacgcgtcgccgtcatc
tcggcttcggccctttcagtgcttttttgcggctccgttcgtctaccttcaccaaatcag
ataacacttgtttctggctcgggtctgtag
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