KEGG   Aureococcus anophagefferens: AURANDRAFT_72762
Entry
AURANDRAFT_72762  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03082  ATP-dependent chromatin remodeling
aaf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AURANDRAFT_72762
   03083 Polycomb repressive complex
    AURANDRAFT_72762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aaf03036]
    AURANDRAFT_72762
Chromosome and associated proteins [BR:aaf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     AURANDRAFT_72762
  Histone modification proteins
   HAT complexes
    HATB complex
     AURANDRAFT_72762
   HDAC complexes
    Sin3A-HDAC complex
     AURANDRAFT_72762
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     AURANDRAFT_72762
    PRC2.2
     AURANDRAFT_72762
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     AURANDRAFT_72762
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    AURANDRAFT_72762
  Chromatin remodeling factors
   NuRD complex
    AURANDRAFT_72762
   NuRF complex
    AURANDRAFT_72762
   NuRF complex (fruit fly)
    AURANDRAFT_72762
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz WD40 Beta-prop_EIPR1 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I WD40_RFWD3 Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C MIOS_WD40 TAF1C_beta-prop Beta-prop_DCAF4 UL41A WD_LRWD1 NBCH_WD40
Other DBs
NCBI-GeneID: 20228866
NCBI-ProteinID: XP_009041991
JGI: Auran1_72762
UniProt: F0YNK3
LinkDB
Position
Unknown
AA seq 297 aa
MIETADGSDMQMKVIHEEYKIWKKNAPFLYDLIMTHALEWPSLTIQQRSSENVAQKLVLG
THTSNGEQNYLMIASIKLPDLDMDMTKGEVNRCMPQNPFILATKSPSSEVHVFDVSKHPS
VPKDGSFRPEHQCTGHTKEGYGLSWNPHIAGQLLSGSDDGSICLWDINQACMKIAALSTW
QDHVDVVEDVSWHAHNPHVFGSVGDDRQLLLWDARNKQQDPFARVTAAHCADINAIAFNQ
HHEFLLATGSADETIKVWDIRNTSEAIHTLSGHTKEVFQLQWAPFSASILSSCGADR
NT seq 891 nt   +upstreamnt  +downstreamnt
atgattgaaacagccgatggtagtgatatgcaaatgaaggttatacacgaagaatataaa
atatggaaaaaaaatgcacctttcctctatgatctcattatgacacacgctcttgagtgg
ccgtctttgaccatacagcaacgcagttctgagaatgtggcgcagaaactcgtgcttggt
acacatacgtcgaatggtgaacagaactatctaatgatagcatctatcaaactacccgac
ttggacatggatatgaccaaaggtgaggtgaatcggtgcatgcctcagaatccttttatt
ctggccaccaagtcgccatcttccgaagttcatgtgtttgacgtatcaaaacacccatca
gtaccgaaagacgggagctttcgtcctgagcatcagtgcaccgggcacacgaaggaaggc
tatggtctctcttggaatccgcacatcgctggacagcttctgagtggttctgacgacggt
agtatatgcttatgggatatcaaccaagcctgcatgaagattgccgcattaagcacgtgg
caggaccacgttgatgttgtcgaagatgtatcatggcacgcgcataatcctcacgtcttt
ggatcagtcggtgatgataggcagctgctcttgtgggatgcacgaaataagcagcaagat
ccgtttgcacgggtcactgctgctcactgtgccgatataaatgcaatagcatttaaccaa
catcatgaatttttgttggctaccggctcggcagatgaaacgatcaaagtctgggacatt
cggaacacctccgaagccattcatacgctttcgggccacaccaaagaagtttttcagctg
caatgggcaccattcagcgcctcgatactatcctcatgtggagcggacagg

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