Aedes aegypti (yellow fever mosquito): 110678066
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Entry
110678066 CDS
T01053
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110678066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aag00536
]
110678066
Glycosaminoglycan binding proteins [BR:
aag00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110678066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
DUF3439
Motif
Other DBs
NCBI-GeneID:
110678066
NCBI-ProteinID:
XP_021706293
LinkDB
All DBs
Position
3:complement(353273331..353288981)
Genome browser
AA seq
1564 aa
AA seq
DB search
MKFRIRHTALLPLLLIAVILIDQVRSEEDGTVQVVKKVKKKSKKVIKLKPKALAKKPRER
PQADAPPAYPEYDNYDSYDYGDGERDYDGENGNRGTESTFRQPDDEIPRGEVPSPHITVS
VSPLEPESIVQPFTCFYEGKWYREQDQFQSGYKGCATCQCRNSIVICDEADCPKIKADVN
VEIIPPSTTTTTTTTTTTTEIPEFDAAQIGNRAPLAPSGQPGVPGEAGLPGTPGTPGVPG
QPGPPGPPPDLTFYTQQLQESMAGSDKGPSPDNFQFMQAQVGPVGPRGPPGPSGVSGPQG
FQGMRGEPGEPGPQGISGPSGPRGLPGPPGKDGAPGDDGEQGPQGTVGAPGPRGLPGLPG
MPGIKGHQGLPGQDGPKGELGAPGEKGSVGTIGPIGAPGPIGPAGPRGERGREGPPGPAG
LRGIDGIAGPPGQPGPVGKSGPPGFPGTPGNKGDMGAQGPKGSQGPQGPRGESGRPGQPG
EPGLNGPPGKDGASGEKGSVGAPGMAGPPGFPGPRGAPGSNGSPGDPGIKGEPGLPGERG
YKGDAGIKGEDGMPGPRGVPGAVGPEGKRGKRGMKGPTGLTGPQGERGLPGVPGLPGPDG
AQGIKGQSGDRGAPGPQGNKGSTGDPGAPGQPGIQGLRGMTGKPGAQGKSGAPGERGPAG
ADGKTGEPGSQGLQGLPGPIGLPGDKGFPGEPGKDGDIGPPGAQGPRGDAGKDGPPGVSG
PPGPPGNDGDRGPPGPGGPRGFQGLPGTPGNPGAPGKDGQNGQPGPVGPAGQTGIRGERG
FPGERGPIGTPGTPGLRGEPGSQGNDGPPGSPGPVGMKGHQGAPGMIGMPGLRGLPGPAG
EKGERGSLGPIGPEGPAGRQGERGLQGPMGQTGPPGEPAEKGEPGTPGIPGEPGTPGAIG
ERGPVGPQGLQGFPGPQGTSGLPGPKGDRGSMGLKGEQGNSGNPGAPGEQGPQGLVGLTG
SKGARGEPGLRGEAGSMGPPGRPGDQGAAGQPGNPGPPGSAGIPGLKGNPGDTGRPGNPG
PAGMPGQPGTEGLKGAAGSDGPAGPPGNPGPQGPHGDRGLPGLPGPSGQPGARGLRGAAG
EPGQSGKPGNDGPPGPMGIAGPPGQQGPAGDPGIEGVPGKQGPPGIAGRTGDKGPVGTPG
SQGLPGAPGLPGPPGPQGLIGQTGERGLRGETGPQGIDGPTGPRGKPGPPGSEGSKGDAG
EPGAKGVKGHRGLIGLQGLPGPAGLPGDKGDTGAAGQPGKPGESGPRGPPGRDGSPGPQG
ILGIAGPRGSPGNDGKPGPVGPAGPPGPPGPPGDGIGYDAAALAALLGHGQVSNMKGPDP
NQGDEPMQFNKVFELTDEERRKLVETAYERLKTTFNTFKKPDGKQSSPAKTCRDLFAAYP
EYKSGHYWIDPNEGDVRDAILVYCDAEKRSSCILPQPLRTKELHYVGEEHEVWLGEMETG
MKITYKADSNQIGFLQLLSGSATQNVTYHCKNSIAFFNKEKNSYRQSLKLLAWNDAELTA
RGPQRLRYDAVLDECQHRSSTYAQTILSYKTEKPTRLPIIDIAVRDVGESNQQFWIEIGA
VCFQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgaatcaggcatacggctctgctgccgttgctgttgatagctgtgatactg
atcgatcaggttcgatcggaagaagatggaacggtacaggtggtgaagaaggtgaagaag
aagtcgaagaaagttatcaaattgaagccgaaagcgttggccaaaaaaccgcgggagaga
ccccaggcggatgctcctccggcgtatcccgagtacgacaattacgacagctacgattat
ggggatggcgagcgggactatgatggagagaatggcaatcgcggaacagagtcgacattc
cgccagcctgatgacgaaattccacgtggtgaagtaccatcgccccacatcactgtcagc
gtgagtccattggagcccgaatccatcgtgcagccgtttacttgtttttacgagggtaaa
tggtaccgggagcaagatcagttccagtcaggctacaaaggatgtgccacctgccagtgc
cgcaacagtattgtgatctgcgatgaagctgactgccctaagattaaagccgatgtaaac
gtggaaattattccaccgagcaccacaacaacgacaactacgaccacgactacgaccgaa
ataccggaattcgatgcagcacaaatcggaaaccgagcgccattggccccaagtggtcaa
cctggggtccctggagaagctggactaccgggtacacccggtacacctggagttcctgga
caaccaggtccacccggaccaccaccagatttaacgttttacacacagcagcttcaagag
tcaatggctggttcagacaaagggccttcaccagacaacttccaattcatgcaagcccaa
gttggccctgttggccctaggggtcctcctggtccatccggagtttcaggacctcaaggt
tttcaaggcatgcgcggtgaaccaggagaacctggtccacaaggtatctcgggtccatca
ggtccacgtggtctcccaggtccccctggaaaggatggagcgcctggtgatgacggcgaa
caaggaccacagggaactgtcggagcaccagggccacgaggattaccgggcttacccgga
atgcctggcatcaaaggtcaccaaggattgcctggccaagatggtccaaaaggagaacta
ggggcaccgggagaaaagggctcagtaggaacgataggtccgatcggcgcaccaggacca
attggcccagccggaccgcgcggtgaaagaggacgcgaaggaccaccaggaccggcagga
ttgagaggcattgatggcatcgctggacctccaggtcaacctgggccagttggtaaatca
ggccctcctggtttccctggcacgcctggaaacaaaggtgacatgggagcacagggacca
aaaggcagtcaaggtccccaaggaccacgaggagaatctgggagaccgggccaacctggt
gaaccaggtttgaatggccctccaggcaaagatggcgcttctggcgaaaaaggctccgtc
ggtgctcctggtatggctggtccaccaggcttccctggacctcgtggggctccaggttca
aacggtagtcccggagatccaggaatcaaaggagaacctggcctacctggggagcgaggt
tacaagggagatgcgggaatcaaaggagaagatggaatgccaggtccacgaggagttcca
ggtgctgttggtcccgaaggaaagcgtggcaaacgtggcatgaaaggacccaccggtcta
acaggtccgcagggagaacgaggattacctggtgtccctggattacctggtccagatgga
gctcaaggaataaagggacaaagcggtgacagaggtgcacctggcccgcagggcaacaaa
ggatcaacgggtgatcctggagcaccaggtcaaccaggaattcaaggattaagaggaatg
actggcaaaccaggtgcccaaggaaaatctggtgcgcctggcgaaagaggccctgctgga
gcggatggaaaaactggggaaccaggatcacaaggacttcaaggtcttccaggacccata
ggtcttccaggagataagggtttccccggtgagcctggaaaggatggagacataggacct
ccaggagcacaaggtccccgaggagatgcgggaaaagatggtccacctggcgtgtcagga
ccacctggcccacccggaaacgatggggatagaggcccaccaggacctggcgggccacga
ggtttccagggattaccaggaacaccaggcaacccaggagcaccagggaaagatggtcaa
aatggacaacctggtcctgttggaccagctggtcaaactggtatcagaggcgaacgaggc
ttccctggagaaagaggaccaataggtacaccaggaacacctggtttgcgaggagaacca
gggtcacaaggaaatgatggacctccgggttcaccaggtccagttggcatgaagggtcat
cagggagctcccggtatgattggtatgccaggattgagaggattaccaggaccggcaggt
gaaaagggagaaagaggttctctgggtccaatcggtccagaaggcccagctggtagacaa
ggcgaacgaggtcttcaaggccccatgggtcaaacaggtccaccaggagaacctgccgaa
aagggggaaccgggtacaccaggtattccaggagagcctggtacaccaggagcaattgga
gaacgtggtcctgtgggaccacaaggattacaaggattccctggcccgcagggtacaagt
ggattacctgggccaaaaggtgatcgtggttcgatgggcttgaaaggagaacaaggaaat
agtggcaaccctggtgcacctggtgaacagggaccacaaggtttagttggtttgactggc
agtaagggagcgcgcggtgaacctggtttaagaggagaagctgggtctatggggcctcct
ggaagacccggtgatcaaggcgcagcgggtcaacctggaaacccaggtccacctggaagt
gcaggaattcctggtttgaaagggaatccaggcgatactggtagacctggcaacccaggt
cctgcaggaatgcctggtcagcctggaacagagggactcaaaggagcagctggaagtgat
ggtcctgcaggtcctccagggaacccaggacctcaagggcctcatggtgatcgtggattg
cctggccttcctggaccaagtggtcaacctggagcaagaggtctacgaggtgctgctggg
gaacctggacagtctggcaagcctggaaatgatgggccaccaggacccatgggaatcgct
ggaccacctggtcagcaaggtccagccggtgatcctggtattgaaggtgtacctggtaaa
cagggacctccaggaattgcaggacgtaccggtgataagggccctgttggtacaccaggt
agtcaaggtttgcctggtgctcctgggctgcctggtcctccaggacctcagggtctcatt
ggtcaaacaggagaacgaggtttacgaggtgaaacaggtccacaaggtatcgatggaccc
acaggtcctcgcggaaaacccggtccaccaggatcggaaggctcaaagggagatgccggt
gaacctggcgccaagggagtgaaagggcatcgaggtttaatcggtctgcaaggtctaccc
ggtcctgctggacttcctggagataagggtgacactggtgctgcaggtcagcctggaaaa
cctggtgaatctggcccacgaggtccacctggtagagatggttctcctggccctcaggga
atcttgggtattgcgggtccacgaggctctcctggaaatgatggaaaaccaggaccagtt
ggtccagctggtcctccaggtcctcccggaccaccaggcgatggcattggctatgatgca
gcagcattggctgctttattaggtcatggtcaggttagcaacatgaaaggaccagatcca
aaccaaggagatgaaccaatgcaattcaacaaagtttttgaactaacagacgaagaaagg
cgaaaactggttgagacagcttacgaacgactgaaaactactttcaatacattcaaaaaa
cctgacggtaagcaatcatcaccagctaaaacttgtagagatctttttgctgcctaccca
gagtacaaatccggacattactggattgatccaaatgaaggtgatgtgcgagatgcaatt
ctagtatattgtgatgctgagaagagatcatcatgtattctcccacaacctttgcgaaca
aaagaactgcattacgtgggtgaagaacatgaagtttggttaggcgagatggaaaccggt
atgaaaataacatataaggctgatagtaatcaaatcggattccttcaactattgtctgga
tcggcaacgcaaaatgtaacctatcactgcaaaaacagcatagcattcttcaataaggag
aaaaatagttatcgacagagcttgaagcttctagcatggaatgatgctgaactgacggca
agaggtcctcagagattgcgatacgacgcggtcctggatgagtgtcaacatcgaagttcg
acctatgctcaaacaattttatcctataagacggagaaaccaacgaggctgccgataatt
gacatagccgtgagggatgttggcgagtcgaatcaacagttctggatcgaaattggcgcc
gtgtgctttcagtga
DBGET
integrated database retrieval system