Aedes aegypti (yellow fever mosquito): 110679261
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Entry
110679261 CDS
T01053
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110679261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
110679261
03041 Spliceosome [BR:
aag03041
]
110679261
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110679261
Spliceosome [BR:
aag03041
]
Complex B
Other components
Prp19-related factors
110679261
Complex C
110679261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_2
TPR_12
TPR_8
Mad3_BUB1_I
TPR_10
RPN7
ARM_TT21
ARM_TT21_C
TPR_7
NRDE-2
DALR_1
PPR
SNAP
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
110679261
NCBI-ProteinID:
XP_021709179
LinkDB
All DBs
Position
3:335531290..335534167
Genome browser
AA seq
864 aa
AA seq
DB search
MPISAEVNLADVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPKFVINTVFERALKE
LPGSYKLWYNYLKTLRRQVKGKCITDAEYEEVNNAFERALVFMHKMPRIWMDYCSFMTGQ
CRITRTRQVFDRALRALPITQHQRIWPLYLEFLGKFDIPETAVRVWRRYLKLCPEDAEEY
VEFLTGIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDAI
IRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMEEMAKNPTPTEADEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RIELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVEFAKFYEKNKQLDDARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRAENFENALKIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFQTCKQVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFKAYE
KGISLFKWPNVYDIWNTYLTKFLKRYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEDHGLARHAMAVYERATTAVKEDEAFAMFNLYIKKAAEIYGIPRTRQIYEKAIEALPEA
QSRQMCSLFAEMETKLGEIDRARAIYAHCSQMCDPRITAEFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSATLINSAVTGAGSEPRDAMRALEAKAAETSARAIAAVGAS
GGNIMFVRGETQGGSKKEDKVMNPDEIDIDEDEDDDEEEEVEGEEGAEEEDVSKKMPVEK
QAIPSKLFGSLRREEEEEEDEDGE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttccgcggaagtgaatctggcagatgttttcttcaacgaggaagatctcccg
tacgaggaggaaatcctccgtaatgcgtattcggtgaagcactggatgcgatacgtggaa
cacaaacgcaacgcgcccaagttcgtgatcaacaccgtgttcgagcgggccctgaaggaa
cttcccggctcgtataagctgtggtacaattatttaaaaacgctgcggaggcaggtcaag
ggaaaatgcatcaccgatgcggagtacgaagaagtcaataatgctttcgagcgggcactg
gtcttcatgcacaaaatgccacgcatttggatggattattgttcgtttatgaccgggcag
tgccggattacaagaaccaggcaggttttcgacagggcattgcgagccttgccgataacg
cagcatcagagaatttggccactgtatttggagtttctgggaaagtttgacattccggag
acggcggtccgggtttggaggagatatctgaagctgtgtccggaggatgcagaggaatat
gtggaatttttgacggggataggacatttggatgaggcggctcaacagttggcaagcatc
gtggataatgaaaacttcgtttcgaagcatggcaaatccaatcatcagttgtggaacgag
ttgtgtgagctgatttctaagaatccggataaggtgcactcgctgaacgtagatgcgatt
atccggggaggactgagacgttacacggatcagttgggacatttgtggaactcgctggcc
gattattacgtccgaagtggtttgttcgacagagcgagggatatctacgaggaggccatt
caaactgtaacgaccgtgcgagacttcagtcaggtgttcgatgcttatgctcagttcgag
gagctgagcctgagtaaggtgatggaagagatggccaagaatccaaccccgacagaggcc
gatgaaatcgatgtggaactgaggatggctcgatttgaatatctcatggaacgacgatta
ctgctgctgaatagtgtcctactcagacagaatccacacaacgttgcggaatggcacaaa
cggatcgaattgtacgaaggcaagcctcatgagatcatcaacacatacaccgaagctgtc
cacacggtgcaaccgaaattagctgtcgggaaattgtacacgctatgggtagagtttgca
aagttctacgaaaagaataaacaactggatgatgcccgaattgtatttgagaaagcagtg
caagtggactatctcaaagtggacgaattggcgagcgtttggtgcgaatgggccgagatg
gaaatacgcgcagagaatttcgaaaacgctctcaaaatcatgcaacgagcaacggccatg
cccaaacggaaagttgcttatcacgatgataccgagacggttcaaatgcgcgtctacaaa
tcccttaaactttggtcaatgtacgcagatttggaggaatcgtttgggactttccaaacc
tgcaagcaagtttacgaccgaatcatcgatttaaagatttgcacccctcaaatcatcatc
aactacggattgttcttagaagaacacaactactttgaggaggcattcaaggcgtacgaa
aaaggtatctcactcttcaaatggccgaacgtgtacgacatctggaatacctacctgacg
aagttcctcaaacgatacggcggacaaaagcttgaacgcgcacgtgatctattcgaacag
tgcctggacggttgccctccggaactcgccaagaacctgtatcttctctacgccaagctc
gaggaagaccacggcctcgctcgacacgccatggcagtctacgaacgggccacgaccgcc
gtcaaggaagacgaagcgttcgccatgttcaacctctacatcaagaaggcagcggaaatc
tacggaatcccacggacgcgccagatctacgaaaaggcaattgaagcgctcccagaggct
caatcccgccagatgtgctcgctgttcgccgagatggaaaccaaactgggcgaaatcgat
cgggccagggcaatctacgctcactgcagccagatgtgcgacccgcgcattaccgccgaa
ttctggcaaacgtggaaggagttcgagatccgtcacggcaatgaggacacgatgagggaa
atgctccgaatcaaacgatcgatccaggcgacgtacaacacccagatcaacatgatgtcg
gccacgttgatcaactcggcggtgacgggggccggttcagaacctcgggatgctatgcgg
gcactggaagctaaggcagcagagactagtgctagggcaattgcggcggtgggtgccagc
ggaggtaacatcatgttcgtccggggcgagacccagggtggatcgaagaaggaggacaag
gtcatgaatccggacgaaatcgacatcgacgaggacgaggatgatgacgaggaagaggaa
gtcgaaggagaagagggtgccgaagaggaggacgtcagcaagaaaatgccggttgagaag
caagcgataccttcgaagctgtttggtagcttgcggcgagaggaggaggaggaggaggac
gaggatggtgagtaa
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