Aedes aegypti (yellow fever mosquito): 23687783
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Entry
23687783 CDS
T01053
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03020
RNA polymerase
aag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
23687783
09124 Replication and repair
03420 Nucleotide excision repair
23687783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
23687783
03400 DNA repair and recombination proteins [BR:
aag03400
]
23687783
Enzymes [BR:
aag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
23687783
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
23687783
DNA repair and recombination proteins [BR:
aag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
23687783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
23687783
NCBI-ProteinID:
XP_011493480
UniProt:
J9HHP4
A0A1S4G6H1
LinkDB
All DBs
Position
2:complement(300344873..300372057)
Genome browser
AA seq
1887 aa
AA seq
DB search
MNGDSKAPLRTVKKVQFGILSPDEIRRMSVTEGGIQYAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFVTKTIKILRCVCFYCSKMLVAPSNPKI
KEIVMKSKGQPRKRLAYVYDLCKGKKICEGGEDMDITKDGAAPDPNKKQGHGGCGHYQPS
LRRTGLDVIAEWKHVNEDSQEKKIAVTAERVWEILKHITDEECYVLGMDPKFARPDWMII
TVLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNEATGAAAHVIAENIKML
QFHVATLVDNDMPGMPKAMQKSGKPLKSVKSRLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLR
FHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLEKEQMMNLLMFLPTWDGKMPQPCILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHP
DEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFYG
NIQTVVNNWLLLEGHSIGIGDTIADPQTYAEIQRAIRKAKEDVIGVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTIK
LSNKVFEKRYRFDPTNERNLRRVFNEDVIKELTESPDVIQEIEAEYEQLLRDREALRQIF
PNGDSKVVLPCNLQRMIWNVQKIFHINKRGTTDLSPLKVIHGVRDLLTKCVIVAGTDRLS
KQANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQCNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNGDDSKFQ
ENEEENMDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKRRIVITPEGEFK
AIGEWLLETDGTAMMKVLSERDVDPVRTASNDICEIFQVLGIEAVRKSVEKEMNNVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSIMGGSGMFFGPGATPSMSP
AMTPWQQSQTPGYCDWSPSGPPSGMTPGGPSFSPSAQSDVSGMSPLWSPMPGSPSSPGPS
MSPYFPSSPSASPSYSPSSPNYAAASPGGASPAYSPTSPSYSPTSPTYSPTSPRYSPTSP
NYSPTSPQYSPTSPSYSPTSPHYSPSQPYGPSSPAYSPTSPSYSPTSPYSPTSPSYSPTS
PAYSPTSPSYSPSSNSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYS
PTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQ
HSPGGSNNFMSSSPTYSPSATYSPNMSSYSPGSQKYSPTSPVYTPTSPNYSPSSPAFSPT
GQGYSPSSPASPTYSPTSPSYEDSPDD
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgattcgaaggcgccccttcggacggtcaaaaaggtccagttcgggatcctt
tcgccggacgaaatccgtcggatgtcggtgacggagggcggaatccagtatgccgaaacg
atggaaggtggtcgaccgaagctgtgcggtttgatggatccccgacagggtgtcatcgag
cgtacctctcggtgtcagacatgtgccggcaacatgaccgaatgtccgggccatttcggt
cacatcgatctggccaagccggttttccacatcggtttcgtcaccaagaccatcaagatc
ctgcgctgcgtttgcttctactgctcgaagatgttggtcgctcccagcaatcccaagatc
aaggaaatcgttatgaaatccaagggacaaccccgcaaacgactggcctacgtttacgat
ctgtgcaagggcaagaagatttgcgagggcggtgaagatatggacatcacaaaagacggt
gccgcaccggatccgaacaaaaagcaaggccacggcggttgcggtcactatcagccttcg
ctcaggagaaccggattggatgtgattgccgaatggaagcatgtcaacgaagactcccag
gagaagaagatcgccgtaacggccgaacgagtttgggaaattctgaagcacattaccgac
gaggaatgctacgtcctgggaatggatccgaagtttgctcgccccgattggatgatcatt
actgttttaccggttcctccgctagctgtgagaccggctgtcgtcatgttcggagccaca
aagaatcaggacgatttgacccacaagctgtcggatatcatcaaggccaacaatgaactg
aagaagaacgaagcgactggtgctgccgctcacgtcattgcagaaaacatcaagatgttg
cagttccatgtggccactctggtagacaacgatatgcccggtatgccaaaagccatgcaa
aagagtggaaagcccctgaagagtgtcaaatctcgcttgaagggcaaggaaggtcgtatt
cgtggtaatttgatgggaaagcgtgtggacttttcggctcgtactgtcatcactccggat
cccaatctccgtatcgatcaggtcggtgtccctcgctcggttgcacaaaacatgaccttc
cccgaattggtcactcccttcaacatcgacagaatgcaagaactcgtacgaagaggaaac
tctcaatatcccggcgcaaaatacattgtccgtgacaatggcgaacgaattgatctacgt
ttccatcccaaatccagtgaccttcatctccagtgcggttacaaagtggagcggcatttg
cgtgacgacgatttagtcattttcaaccgtcagcccactctccacaagatgagtatgatg
ggtcatcgtgttaaagtactcccctggtccacattccggatgaacctcagttgtacctca
ccgtacaacgccgattttgacggagacgaaatgaatcttcacgtgccgcagtccatggaa
acgcgtgctgaaattgaaaacatccatatcaccccccggcagatcattactccccaggcc
aacaaacccgtcatgggtattgtgcaggatacgctgacggctgtgcgaaaaatgaccaaa
cgtgacgtcttcctggaaaaggaacagatgatgaaccttctcatgttcttgcccacttgg
gatggcaaaatgccgcaaccttgcatcctcaaacccaaacccctttggacaggaaagcaa
atcttcaccctcatcatccccggaaacgtaaacatgatccgtacccattcgacccatccg
gacgaggaggacgacggtccgtacaaatggatctcccccggagacaccaaggtcatggta
gaacacggcgaactgatcatgggtattctctgcaaaaagactctcggtacctcggctggt
tctctgctgcatatcgttttcctcgaactgggacacgaaattgccggtcggttctacggt
aacattcagactgtggtcaacaactggctgctgctcgaaggccacagcatcggtatcgga
gacaccattgccgatcctcagacgtacgccgaaattcagagagccatccgcaaagccaaa
gaggatgtcattggcgttattcagaaggcgcacaacatggaattggaaccgacccccggt
aacacgcttcgacagactttcgagaatcaggtgaatcgcattctgaacgacgctcgtgac
aaaactggtggctccgctaagaaatcgctgactgaatacaacaacctcaaggctatggtg
gtttccggttccaagggatctaacattaacatttctcaggttattgcttgtgtaggtcaa
cagaacgttgaaggtaagcgaattccgttcggttttcgtaagcgcactctgccgcacttc
atcaaggacgattacggtcctgaatcgagagggttcgtggaaaattcgtaccttgccgga
ctgacgccaaccgagttctacttccacgctatgggaggtcgtgaaggtttgattgatact
gctgtaaagactgctgaaaccggttatatccagcgtcgtctgatcaaggctatggagtcg
gtaatggtgaattacgatggaaccgtgcgaaactctgtcggccagctgattcagttgcgt
tacggcgaggacggattgtgcggagagacggtagagttccagaatcttcctacgatcaag
ctgtcgaataaggtgtttgagaagcgttatcgcttcgatccgacaaatgagaggaatctg
cgtcgagtgttcaacgaggatgtcatcaaggagctgaccgagtcaccggatgtaatccag
gaaattgaagctgaatacgaacagttactgcgagatcgcgaggctctgagacagatcttc
ccgaacggtgactccaaggtcgtattgccttgcaatttgcagcgtatgatttggaatgtg
caaaagattttccacatcaacaagcgaggcaccacagatctttctccgctgaaggtaatt
cacggagtaagagatttgctaaccaaatgcgtcatcgtagctggtacggatcgtttgtcg
aaacaggccaacgagaacgccacgttgctgttccagtgtttggttcgatcaacgctttgc
acgaaatatgtcgccgaagagttccgcttgaataatgaagcatttgagtggttgatagga
gaaatcgaaacccgtttccaacaggcccagtgtaatccgggtgagatggtcggtgccttg
gctgcacagtcgcttggagaacccgctacccagatgacactgaacactttccattttgct
ggtgtgtcctcgaagaacgtaacattgggtgtacccagattgaaggaaatcatcaatatc
tccaaacgaccaaaggctccttctctaacggttttcctcacgggtggcgctgctcgtgat
gccgaaaaggccaagaacgtgctttgtcgtttggaacataccacactgcgtaaggtcacg
gccaatacggccatctactatgatccggacccacagcgaaccgtcatcgccgaggatcag
gaattcgtcaacgtttactacgaaatgcccgatttcgatccaactcgtatttcgccgtgg
ctgctgcgtattgaactggatcgtaagcgtatgacagataagaagttgactatggaacag
atcgctgagaagatcaacgcaggtttcggtgacgatctgaactgtatcttcaacgacgat
aacgctgacaagcttgttctacgcatccgtatcatgaacggagatgacagcaaattccag
gagaacgaagaggaaaatatggacaaaatggaggacgacatgttcctgaggtgtatcgaa
gcgaacatgctgtcggacatgacgctgcaaggaattgaagccatcggaaaggtgtacatg
catttgccacagaccgatgccaagagaaggattgtcatcactccggaaggtgaattcaag
gccatcggagaatggttgctggaaactgacggtactgctatgatgaaggtattgagtgag
cgagatgtagatccggtacgtacggctagtaacgatatttgcgagatcttccaagtgctt
ggaatcgaggctgtgcgaaaatccgtcgagaaggaaatgaacaacgttctgcagttctac
ggtctgtatgtaaactatcgtcatcttgccttgctttgtgacgtcatgactgcgaagggt
cacttgatggccatcacacgtcacggtatcaacagacaggacaccggtgctctgatgaga
tgttccttcgaagaaacagtggacgtgttgaacgatgccgctgcccacgcagaagtcgat
cctatgagaggagtgtcggaaaatattatcatgggacagctgcctagaatgggaactggc
tgtttcgatttgctactggatgccgaaaagtgtaaactaggcatggaaattccacacaca
tccatcatgggtggatcgggaatgttcttcggtccaggagcaacaccaagtatgagtcca
gctatgactccttggcaacaatcgcagactcctggctattgcgattggtctccttcggga
ccaccaagtggaatgactcctggaggaccaagcttctcaccgtctgcacaatccgacgtg
tcaggaatgtcgccattgtggtcaccaatgccaggttcacccagttctcctggtccatcg
atgtctccctacttcccatcatctccaagtgcatctccatcatactctccgagcagtcct
aattatgctgctgcgtcaccaggaggcgcctctccagcctattcacctacaagccccagc
tattcgcctaccagtccaacctattctccaacaagcccacggtactcaccaacaagtccg
aattacagcccaacgtcaccgcagtactcgcccacatctccaagctattcgccgacctca
ccacactactctccatcgcagccctacggtccttcaagccctgcgtattctccaacttcc
ccttcgtattccccaaccagcccgtactcacccacatctccaagctattcaccaacctct
cctgcatattccccaaccagcccatcctattcaccatccagcaattcctattccccaact
tcaccgtcatactctccaacatccccaagttattcaccgacctctcccaactacactcct
gcaacaccgtcgtactctccgacgagtcccaactactctcctagctcgccgcactactcg
ccaacctctccatcctactccccatcttctcccaaatactctccaacatctccaagctac
tcgcccacatccccatcctacggcggaagcccacaatacacccccgccagtccacaatat
tccccgaccagccccaaatactctccaacgtcacccagctattccccgagctcaccgcag
cattcgcctggtggtagcaataacttcatgagtagttcaccgacctactccccatcggca
acctactcgccgaacatgtcctcctactctcccggcagtcagaagtattcgcccaccagt
ccggtctacacgcccacctcgccgaactactccccatccagtcctgctttttcgccgacc
gggcagggctacagtccctcgagtccggccagtccaacctactcgccgaccagcccatcc
tacgaggacagcccagatgattaa
DBGET
integrated database retrieval system
