Aedes aegypti (yellow fever mosquito): 5564640
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Entry
5564640 CDS
T01053
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
5564640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5564640
03036 Chromosome and associated proteins [BR:
aag03036
]
5564640
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
5564640
Chromosome and associated proteins [BR:
aag03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
5564640
PBAF complex
5564640
GBAF(ncBAF) complex
5564640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
5564640
NCBI-ProteinID:
XP_021710334
LinkDB
All DBs
Position
3:complement(92964044..92997472)
Genome browser
AA seq
1153 aa
AA seq
DB search
MVSLGPKKDGSPNAEFFTAPESLQGFETVRQWLQKNFKKYLAPDPPTKESLAQLIIQFVQ
YQETKLGKNAQDPPTTRLPMRCFMDFKPGGALCHILATMYRYKAEQRWRKFDFTVNKNPM
RKDPIIQMLLDMETALIEAECMRLPIVYVRPEVDKGTANRITDIVTNHQGEMTLDEEEAT
HIIYPAVDPLPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNTFDLPDNVPDSPMSPGDR
WRVSLSWVTDLDEYNEWMAEEDYEVDEDGRKKVHKLRLGVEDLMSGVDDKIKKSKVVHQK
RKRSPSPPLKGGKRKSGRSPAVFQKKPRADDEESEDMTKDMDDPQPETNLTEVKASSSNS
TSGPATPQPKRDPEMMPIKYATMTDLDEEIDRANADRAGDDSQAGKTSDNSNTQEFPHGK
DDLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRALPXFFNGKNKSKTPEIFLAYRNFMI
DTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSH
FHVLSDTPSGLQPLNPPKTAQPSAAKNLLDWTRKPTXKDDPATPGTPAAAATPADGIKTE
AGAVAADPNGQFGLRLDQYAKKPSAMRNKTAASMSRDWTEQETLLLLEGLEMYKDDWNKV
CEHVGSRTQDECILHFXRLPIEDPYLEDDNTYLGPLSYQPXPFSKAGNPIMSTVAFLASV
VDPRIAASAAKAAMEEFAAIKDEVPATMMDPHLKNVEKSSFGGKFDPYAGLATSGIAGTG
PDKDKDEEEGKLPGSVGTPGVPATPGSTDVEMKDVSKKDDGEFGLRKRSAETDGGTDADK
NKESSSELTKENGDPKVFNEGNLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQ
MKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQ
LEQGQWQQPAGGASQQQLPQGATQGPPGPGQAPGTNSQQQPPVPSTGGHPGAPAPPSSAS
TPSSNGIISAPPTTMPTDGSTPNNVMPPTAPGQPPSSQHTSVPPQQPPNNATPPGPSRKW
CTNAWRSAWWSPSATTSSSASAATTPSPTTGSSATYTRATSTGSGRTRRRSNARTPSGTP
RAAAYQRAYPSTS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgctcggaccgaaaaaggacggcagtccgaatgccgagttcttcacggccccg
gagtcgctgcaggggttcgaaaccgtgcgacaatggctgcagaaaaacttcaaaaagtat
ctggcacctgatcctccgacgaaggaatcgttagcgcaattgattatccagtttgtgcag
taccaggagaccaagctaggaaagaatgcacaggacccacccaccactcgattgccgatg
cgatgtttcatggacttcaaaccgggcggagcgctctgccacattctggccacaatgtac
cgctataaagccgaacagcgctggcgaaagttcgacttcacggtgaacaagaacccgatg
cgtaaggaccccattattcaaatgctgctggacatggaaacggccctcatcgaggccgaa
tgcatgcgtctgccgattgtgtacgtgcgcccggaggtggacaagggcacggccaaccgg
ataacggacattgtcacgaaccatcagggcgagatgacgctggacgaggaggaagcgacg
cacataatctatccggcggtggatcctctgccggaggattacgctcggccaacattccgg
cgcgataagcacgtgatgatccattggtattacttcccggagtcgtacgacacctgggtg
cccaacacgtttgatttaccggataatgtccctgattctcctatgtccccgggagatcgt
tggcgggtgtctctttcctgggttacagatctggacgaatacaacgaatggatggcagaa
gaggactacgaagtagatgaagatggacgcaagaaggtgcataaattgcgccttggagta
gaagatctgatgtccggagtggacgataaaattaagaaatcgaaagttgtgcaccagaag
cgcaaacggtccccttcgcctccactcaagggaggaaagcggaaaagtggccgatcaccg
gccgttttccagaaaaagccccgtgcagatgatgaagaatcggaagacatgacgaaggat
atggacgatccgcaaccggaaacgaatcttaccgaagtgaaagccagttcaagcaattct
acttcaggtccggccactccgcaaccaaagcgtgatcctgaaatgatgcccattaaatat
gctaccatgaccgatctggatgaggaaatcgacagggccaatgcagatcgtgctggagac
gacagccaggccggcaagaccagcgataacagtaacacccaagaatttccgcacggaaaa
gacgatctcgaggacaatgttactgaacaaacgcatcacatcattgtaccgtcgtattcg
gcatggttcgattacaattccatccatgtagttgagaaacgagcccttccgnagttcttc
aatggaaagaataaatcgaaaactccggaaatctttttggcttaccgcaatttcatgatc
gacacttacaggctgaatccaactgaatatcttaccagcaccgcctgtcgacggaatttg
gctggcgatgtttgcgctataatgcgggttcacgcgttcctcgagcagtggggcttgatc
aattatcaaatcgatgctgattcgcgtccaactcccatgggccctccacccacttcccat
ttccatgttctgagcgatactccatcaggtctgcaacctctaaatcctcccaaaacagcg
cagccatcggctgcaaagaatctccttgattggacaagaaaaccgacannaaaggatgat
cctgccactccaggaacaccggccgctgctgcaacgccagcggacggaatcaaaaccgag
gctggagcagtcgctgccgatccaaacggtcaatttgggcttcgtttggatcagtacgcc
aagaaaccgtctgcaatgcggaacaagaccgccgcaagcatgtctcgagattggaccgaa
caggagacactcctactgttggaggggctggaaatgtacaaggacgattggaacaaagtg
tgcgagcatgtgggatcacgcacccaggatgagtgcattctccattttntgagactgccc
atcgaagatccctacctggaggatgataatacctatctggggccactgtcctaccagccg
natccattcagcaaagctggcaatccaatcatgtcgactgttgccttcttggcttcggtg
gttgacccgaggattgctgcaagtgctgccaaggccgctatggaggagtttgctgcaatt
aaggacgaagttccggccacgatgatggatccccatctgaagaatgttgaaaagtcgagc
ttcggaggaaagttcgacccctacgctggattggcaactagtggcattgctggaaccggt
ccggataaggacaaggacgaagaggaaggtaaattgccgggatctgttggcactccgggt
gttcccgcaactcccgggtccaccgacgtggagatgaaggacgtctccaagaaggatgac
ggtgagtttggcttgaggaagcgatcagcagaaaccgatggcggtacagatgctgacaag
aacaaggaatcttcatcggaattgaccaaggagaatggcgatccgaaggtatttaacgaa
ggaaatcttcaatcagctgcagctgctgctttggccgcggctgccgtcaaggctaaacat
ttggccgccgttgaggaaagaaaaattaaaagcttagtcgcattgctagttgagacgcaa
atgaagaaactagaaattaagctgcgacactttgaagagctcgaaacgacaatggaacgt
gagcgcgaaggtttggaatatcaacggcaacagttgatccaagaacgtcaacagttccat
ttggaacaactcaaggcggccgaattccgagcaaggcagcaggctcatcagcgattccaa
ctagaacaaggacaatggcagcaacctgcaggtggcgcttcacagcagcaacttccccaa
ggagccactcaaggcccgcccggaccaggccaggcccctggaactaactctcagcagcag
ccaccagtgccatctaccggtggacatcctggagctccagccccgccgagcagcgccagc
acacccagcagcaacggaatcatctctgctcctcctactacgatgcctacagacggttct
accccaaataacgttatgcctccgacggcgcctggtcaaccgccgtcctcgcagcatacg
tcggttccaccccaacaacctccaaacaatgccaccccacccgggccatcccgcaagtgg
tgcaccaatgcctggaggtccgcctggtggtccccatcagccaccacatcatcctccgcc
tcagcagcaaccaccccttcccccacaacaggctcctctgccacctacacaagggccacc
tccaccggttcaggcaggaccaggaggcgctccaatgcccggaccccctcagggaccccc
cgggccgccgcctaccagcgggcctatccctccacctcttaa
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