KEGG   Aedes aegypti (yellow fever mosquito): 5565415
Entry
5565415           CDS       T01053                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
aag  Aedes aegypti (yellow fever mosquito)
Pathway
aag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    5565415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aag03019]
    5565415
Messenger RNA biogenesis [BR:aag03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     5565415
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 5565415
NCBI-ProteinID: XP_001649768
UniProt: Q17NN4
LinkDB
Position
3
AA seq 274 aa
MDLKTYKKIHPVKYYKDYLEHNIRPDGREIGDLRPLAINFDSIKTADGSAIVKIGNTTVV
CGIKAELAPPKPVEPDTGYLVPNIEISPLSSPKYRPGPPSEEAQVYSCSLADAILNSGCV
NLKDLCITKEQLVWALYCDLVCLDHDGCIFDASVIALVAALHTLRLPPVKHNPDTDEREV
DEDAERIPLKLNSIPVTTSFAVFGGRIIADPTAEEEALATSTITITICDSTLSYINKSGG
DPLEQELLDKCIENAMKREKSVRGLIRKMTKNKA
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatttgaaaacgtacaagaaaatccacccggtcaaatactacaaggactacctcgaa
cacaacatccgaccggatgggcgcgaaattggcgatcttcgaccattggccatcaacttc
gattcgatcaaaacggcggatgggtctgccatcgtgaagataggaaacaccacagtggtc
tgtggcattaaagctgaactggccccgccgaaacctgtggaaccggacacaggttacctg
gtgccaaatattgagatatctccgctttcgtccccaaagtaccgtcctggaccgccaagc
gaagaggctcaagtgtacagttgctcacttgcggatgcaatcctcaattccgggtgtgta
aatttgaaggacctctgcatcaccaaggaacagctagtgtgggcgctgtactgcgatttg
gtgtgtctggatcacgatgggtgcatattcgacgcctcggtgatagctttggtggccgca
ttgcacaccctccggctgccaccggttaaacacaatccggacacggacgagcgtgaagtg
gacgaggatgccgaaaggattccgttgaaactgaactcaatccctgtgacgacatcgttt
gccgttttcggtggacggatcattgcggatcccacggcggaggaggaagccctggccaca
tccaccatcacgattactatttgtgattcaacgctgagctatattaacaagagtggcggc
gatccgctggaacaggaacttctcgacaaatgcatcgagaacgcgatgaagcgggaaaag
tccgtcagggggttgatccggaagatgacgaagaataaagcgtga

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