Aedes aegypti (yellow fever mosquito): 5566451
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Entry
5566451 CDS
T01053
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
5566451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aag00536
]
5566451
Glycosaminoglycan binding proteins [BR:
aag00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
5566451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
DTHCT
Motif
Other DBs
NCBI-GeneID:
5566451
NCBI-ProteinID:
XP_021711935
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MQIVKMIDLRLSHRQRRGSTIFGGRLPVEQLRISAIIVIIVVGLIGSSVAGLVAKDGIVD
LIEQFDLPRLPSGVTPVPGMCNETRNDYQTYPASAYNLNQDTVLSIGTTQVFPNGFPSDF
SILVVLKATPNLVRVPLFTVYSSDSEEVLMLMVGMEVALYYQDTDGNPEEESLISFGVNI
DDERWHRLGISVKGDSVTLIKDCHEQVTRRLRRQAGSVIATDGLILTGVQLNEDEGFFTG
DLQLFMFADTPDEAFHICTKYAPDCLGAGHGSATVTSSMHSFSSPKYIGSERIYIVDVQE
DHQESLVLRVNPDEMDYRGKVDLLDNPGHVFMIPLSQTANEKGPDSQAEAFRAMLSQHMM
AMRGADGPMGLTGVPGPVGPPGPEGTKGEPGDNGEPGSARACEEHMGPPGREGRRGRAGR
DGERGVVGLQGSKGEPGPVGLPGMVGEKGERGRHGNIGEKGAQGHEGIQGEDGPPGLPGL
PGELGPRGFAGPRGFPGPSGNPGIPGTEGLPGVKGNPGPQGQPGAPGQTGPAGPVGPPGP
QGNMGPPGIAGPHGKPGIPGLPGADGAPGREGSPGIVGPKGDIGSQGVQGSIGFPGNRGP
KGDDGERGGPGDKGDKGERGHDGEKGDMGPPGERGLIGLQGTAGIEGPEGPKGFEGPRGE
TGHMGXTGRKGKQGVQGFAGYPGPTGDKGDKGIVGIPGLAGDKGERGNTGLQGERGEVGP
RGFRGARGRRGADGTPGPKGDTGQPGSSGPQGEMGPQGMEGPRGFIGLPGPQGNNGKDGP
QGTPGERGPPGENGNPGPTGTPGVIGPQGPTGEPGPVGEPGIPGLPGMPGEPGVPGDSGK
EGQVGPPGPPGKNGPPGGQGLPGFPGERGMMGMPGLPGLKGEIGVPGLAGPVGDKGQPGE
PGKEGPPGPEGRGGPPGPTGPSGLKGERGEMGLVGPIGRDGLPGQRGLTGPPGPQGSPGE
DGDKGDIGPPGEKGFKGSQGEAGPVGSAGPQGGRGEPGAIGPPGEKGPPGEMGRAGXKGE
DGPTGLPGPPGPAGAQGMPGPSGIKGDRGDDGLVGPAGSIGPPGEPGRRGPRGAEGAPGA
TGPAGPQGTKFNEPGPQGPPGPDGPEGKDGEKGSVGPKGEEGKSGPPGPPGKRGPAGPEG
PKGVVGSPGFPGNPGEPGVIGPKGDTGKDGEDGKQGEPGQTGDPGPPGIPGEVGPPGKMG
PEGPAGLQGSVGPSGEKGDRGLPGPIGNPGLVGPQGMPGAQGLPGLRGSPGASGEIGPVG
KPGESGPPGKIGETGSKGQKGDRGRRGLKGHRGELGMVGLKGDSGEKGDKGVRGNSGPDG
PKGPPGPVGPLGLKGNDGPQGPPGNEGPLGPKGSEGVAGLKGEAGPPGPPGPPGPPAEAP
LIPPELLFRMSEFTMTKGEDRMKREAEEIPEEEDDFDEELLKIEPKKKKKKKKIKDEMGP
KFLDMYSSIYSMRQELDRIRKPVGTRENPGRTCRDLHYGHPQFKDGWYWIDPNLGMADDA
VYVFCNMTAEGETCVFPDLHSSQMPNIPWRKENDKTDWYSNLRGGFRISYETVGVVQMTF
LRLLSEGAYQNFTYTCMNSVAWYSNQEENHDDAIRFLGDNEIDIGYENSKLRPNVLVDGC
KSGKSKSETIFEIRTTKLQYLPIIDFYPVDYGQPQQAFGFQVGPVCFK
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagtgaagatgatagatttacgattgtcccatcggcagcggagaggatcaacg
attttcggtggccgattgccggtggagcaacttaggattagtgcaatcattgtgattata
gtcgttggcctgatcggaagcagcgtcgcaggactggtcgctaaagatggcatagttgac
ctgatagagcagttcgacctgcctaggcttccatcgggtgtaacgccagtgccgggcatg
tgcaatgaaacccgtaacgattaccaaacctacccggcgtcagcctacaacctgaatcag
gatacagtgctcagcattggaacgacccaggtgttcccaaatggctttccatccgacttc
tccatcttggtcgtgctcaaagccacacccaatcttgtacgggttccactgttcacggtg
tattcgtctgattcggaggaagttttgatgctgatggttggaatggaagttgccctgtat
tatcaggacaccgatggtaacccggaggaggaaagcctgatcagttttggcgtcaacata
gatgatgaacgatggcaccggttgggaatcagtgtcaaaggtgattccgtaacactgatc
aaagattgtcacgagcaggtcactcgtagactaagacgacaagctggttcagtcattgcc
acggacgggttgattttaacaggcgttcaactcaatgaagacgaaggatttttcaccgga
gatcttcaactgttcatgtttgccgatactccagatgaagcattccacatctgtaccaaa
tatgcacccgactgtttgggggcgggccatggctctgcaaccgtaacatcaagcatgcat
agtttttcgagtccaaagtacatcgggtcagaacggatctacatcgtcgacgtccaagag
gaccaccaggagagcctggtcctaagggtgaacccggacgagatggactaccggggcaag
gtggacctcctggacaaccctggtcatgtgttcatgattcctctgagccaaaccgccaat
gagaaaggtcccgattcgcaagcggaagcattccgtgcaatgttgtctcagcatatgatg
gctatgagaggtgccgatgggcctatgggattaacaggagtacctggtcctgttggtcct
ccgggaccagagggtacaaaaggagaacctggagataatggtgaacctgggtccgcgagg
gcttgcgaggagcacatgggaccacctggtcgtgaaggtcgtcgagggcgagctggaaga
gatggtgaacgaggagttgttggcttacaaggttcaaagggtgagcctggcccagttggc
ttaccgggaatggttggtgagaagggtgagcgcggtcggcatggtaatattggcgaaaag
ggcgcacaagggcatgaaggaatccaaggagaagatggacctccaggtttacctggtctt
cccggagaattaggtccacgcggtttcgcagggcctcgtggtttcccaggtccatcaggt
aatccagggattcccggaacagaaggtctcccgggcgttaaaggaaaccctggtccacaa
ggtcaaccaggagcaccaggtcagacaggtccagctggtccggtaggacctcccggacca
caaggaaatatgggtcccccaggtatcgcgggcccacacggtaagccgggtattccaggg
ctgcctggagcagatggtgcaccaggacgcgaaggaagccctggcatcgttggacccaaa
ggagacattggctcacaaggagtgcaaggttctattggatttcctggcaatcgcggccca
aagggtgacgatggagaacgaggtggtcctggtgacaaaggagataaaggtgaacgaggc
catgatggtgagaaaggagacatgggcccaccaggtgagagaggattgatcggcctgcaa
ggcactgcgggcattgaaggaccggaagggccaaagggatttgaaggacctcgcggagaa
actgggcacatgggtnttaccgggcgaaaaggtaaacaaggtgttcaaggatttgccggg
tatcctggaccaacaggcgataagggtgataaggggatagtcggtattcctggtttggct
ggtgataaaggcgagaggggaaatactggacttcaaggagagcgtggagaggtcggacca
agaggattccggggagctcgtggtagacgaggcgctgatggtacaccgggacctaagggt
gataccggtcaaccaggatcgtcgggaccgcaaggagaaatgggtcctcaaggtatggaa
ggtcctcgtggtttcataggccttcccggcccacaaggcaacaacggcaaagatggtcct
caaggtaccccaggtgaacgtggccctccgggagaaaatgggaatccaggccctactggt
accccaggtgttatcggccctcaaggaccaacaggagaaccaggtccagttggtgaaccc
ggaatacctggattaccaggaatgccaggggaacccggagttcctggcgatagcggtaaa
gaaggtcaggttggtccaccagggccacccggaaaaaatggtccacctggtgggcaaggt
ctaccaggatttccaggtgaacgaggaatgatgggaatgccgggtcttcctggactgaaa
ggtgaaatcggagtaccaggtctagcaggcccggttggagataaggggcaaccaggtgaa
ccaggaaaagaaggtcctcctggaccagaaggacgaggaggcccaccaggaccaacagga
ccatctggtttgaaaggagaacgaggtgaaatgggactggtgggaccaattggtcgagat
ggactccccgggcaacgtggtttaacaggacctccaggaccgcagggctcgcctggcgag
gatggtgataagggagatattggccctccaggagagaaaggattcaaaggatctcagggt
gaagctggtcctgttggatcggcgggtccgcaaggaggccgcggagaaccgggtgcaatc
ggacctcctggcgaaaaaggaccaccaggggaaatgggccgtgctggcntcaaaggcgaa
gacggtccaacaggtcttcctggcccaccaggtccagcaggtgcccaaggaatgcctgga
ccatccggaatcaagggagatcgtggagatgacggtcttgttggacctgccggatctatt
ggtcctcctggagaaccaggtagacggggtccaagaggagctgaaggtgctcccggagcc
actggcccagcagggcctcaaggtacgaaattcaatgaacctggtccacaaggacctcct
ggtccagatggaccggaaggcaaggatggtgaaaaaggatcagttggaccaaaaggtgaa
gaaggtaaaagtggtccacctggacctccaggaaaaagaggtccagctggaccagaagga
ccaaaaggtgtggttggatctcccggctttccgggtaatcctggagaaccgggtgtgatt
ggccctaagggtgatactggaaaggatggagaagatggaaagcaaggtgaaccgggacaa
actggcgatccgggcccaccaggaatacctggagaagttggacctccaggaaaaatggga
ccggaaggtccggctggattgcaaggctctgtaggtccatctggagagaagggagaccgt
ggattaccaggtccaattggaaacccaggtctagttggtcctcaaggcatgccaggagcg
caaggtctaccaggactgcgaggatcgccaggtgcatctggagaaattggacctgttgga
aaacctggagaatcaggtcctcctggaaagattggtgaaactggatcgaaaggccaaaag
ggtgaccgtggtcgtcgaggtttgaaaggacatagaggtgaactaggtatggttggattg
aaaggtgatagtggtgaaaaaggcgataaaggtgttagaggcaatagtggcccagatggt
ccgaaaggaccccctggaccggtcggtcctcttggcttgaagggcaatgatggtccacaa
ggtccgcctggtaatgaagggccgttaggtccaaaaggttcagaaggtgttgctggtttg
aaaggtgaggcaggaccacctggacctccaggtccacccggtcctccagctgaagctccc
ctaattccaccggagttattgttcaggatgagtgaattcactatgacgaaaggtgaagat
cgaatgaagcgagaggctgaagaaattccagaagaagaagatgactttgacgaggaactt
ttgaagattgagccaaagaaaaagaaaaagaagaagaagatcaaagatgaaatgggtcca
aaatttttggatatgtacagctcaatctactctatgcgccaagaattggatcgaattagg
aaaccagtaggcaccagagagaatcccggcagaacttgccgagatttgcattatggacat
ccgcagttcaaggatggttggtactggatcgatccgaacttgggtatggcggatgatgcc
gtttatgtcttctgcaacatgacagccgaaggcgaaacatgtgttttcccagatttgcac
agttctcagatgccgaacattccatggaggaaggaaaatgataagaccgattggtattca
aacctaagaggcggctttaggatttcatatgaaacagtcggtgttgtacagatgaccttc
ttgcgattactctccgaaggtgcatatcagaacttcacgtatacctgtatgaacagtgtc
gcctggtacagcaatcaagaggaaaaccatgacgatgcgattcgcttcctcggtgacaac
gagatcgatattggttacgaaaactccaaattgcgaccaaatgtcctggtggatggttgc
aaatctggcaaaagcaaaagcgagacaatttttgaaattcgtacaactaaactgcaatat
cttccgatcattgatttctacccggtggattatggacaaccacaacaagcgttcggtttc
caagtaggacccgtatgcttcaaatag
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integrated database retrieval system
