Aedes aegypti (yellow fever mosquito): 5566958
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Entry
5566958 CDS
T01053
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5566958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
5566958
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
5566958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
5566958
NCBI-ProteinID:
XP_001651356
UniProt:
Q0IFE2
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Position
1:123590465..123592973
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AA seq
720 aa
AA seq
DB search
MAQWKDQLKFDIEWGHERLVRAQQTVEVRPFDVESWSVMIREGQSRHINEVRTLYESLVS
VFPTTARYWKIYIEQEMKYRNYERVEKLFQRCLVKILNIDLWKLYLTYVKETKAGLSTHK
EKLAQAYDFALEKIGMDLHSYSIWQDYISFLKSVEAIGSYAENQKITAVRKVYQKAVITP
IIGIEHLWKEYIAFEQNINPIISEKMSLERSRDYMNARRVAKELEIVTKGLNRNLPAVPP
TGTKEEIKQVELWKKYINFEKSNPLRSEDTALVTRRVMFATEQCLLVLTHHPAVWHQAAQ
YLDQSSKQLIDKGDLNAAKVFADEAANILERAINSVLSRNALLYFAYADFEEGRLKYEKV
HQMYNKFLSISDIDPTLAYIQYMKFARRAEGIISARAIFKKAREDVRSTYHVFVAAALME
YYCTKDKDIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPQ
LSVEVWNRFLEFESNIGDLSSIVKVERRRSAVLEKLKEFEGKETAQLVDRYKFLNLYPCS
SAELKSIGYTETDGILNPISTKHSTPVEAPEQPHKIPRPDFAQMIPYKPKPNAYPGEHPL
DGGAFPQPPALAALCSMLPPPICFHGPFVSVDKLQDLFSRIVLPDVAPTPIAGENGNSIK
LFDLAKAVHWIVDDSTYSGEGGLKRRRMAPGGDDSDEETAIPAPPVNDVYRLRQQKRFNR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatggaaagatcagctaaagttcgacatcgagtggggtcacgagcggctggtg
agggcccagcaaaccgtggaagttcggccattcgatgtggaatcctggtcggtgatgatc
cgggagggccaaagccggcacatcaatgaggtgcgtacgctttacgaatcgctggtcagt
gttttcccaaccacggcccgctactggaagatttacatcgagcaggaaatgaagtatagg
aactacgagagggtggaaaagttgttccagcggtgtttggtgaagattttgaacatcgat
ttgtggaagctttacttgacctatgtgaaagaaaccaaggccgggttgagtacgcacaag
gagaaactggcccaggcgtacgattttgcgttggaaaagattggcatggatttacattcg
tactcgatttggcaagattacatttcgttcttgaagagtgttgaggcaattggaagctat
gcagagaatcagaaaattacggcagtgcggaaggtttatcagaaagcggtgataacgccc
attatcggaatagagcacttgtggaaggaatacattgcgttcgagcagaatatcaatcca
atcatttcggaaaagatgagcttggagaggtcacgggattacatgaatgccagacgtgtt
gcgaaagagctggagatagttacgaaggggttgaatcgtaatttgccggcagtgccccca
acggggacaaaagaagagataaaacaggtggaactgtggaaaaagtatatcaatttcgaa
aaatctaatcccctgagaagcgaagacacagcattagttacgcgaagagtgatgttcgca
acggagcagtgcttgctggtgttaacccaccatccggccgtatggcaccaagctgcccaa
tatctggatcagagctcgaaacagctcatcgacaagggcgacttgaatgccgctaaagta
tttgcggatgaagccgccaatattttggaaagggccattaatagtgtactgagtcgtaat
gccctcctttatttcgcatatgccgatttcgaagaaggcagattaaagtacgaaaaagtc
catcaaatgtataacaaattcctgtccatttcggacatcgatccaacgctagcttacatt
cagtacatgaagtttgctaggcgtgccgaaggaatcatttcagctagagccatcttcaag
aaagctcgtgaagatgtacgatccacttatcatgtcttcgttgctgcagcgctgatggag
tattactgcaccaaggataaggacattgcattccgcattttcgagttgggactcaaaaga
ttcggtggaagtcctgaatacgttatgtgctacattgattatctatcgcatttgaatgag
gataacaacacgagagtgttattcgaacgtgtgctctcctccggcggactaacacctcag
ctttcggtggaagtttggaatcgatttttggaatttgagtccaacattggagacctgtcc
agtatcgtgaaagttgaacgccgaagaagtgctgttttggaaaagcttaaagagttcgaa
ggcaaagaaacagctcaactggtagaccgctacaagttcctcaatctctatccatgttca
tcagcagagcttaaatccatcggttacaccgaaaccgatggaatactgaacccaatctcc
acaaaacattcaactccagttgaagctccagagcagccgcataaaattccacgtccggac
tttgcacaaatgattccatacaagccgaagccaaatgcctatccaggggaacatcccttg
gacggtggggctttccctcaacctccagcactggcagccctctgctcaatgcttccaccg
ccaatttgcttccatggtccgtttgtatccgtagataaactgcaggacctattcagtcgt
atcgttcttccggatgttgcgccaactccgatcgcaggagaaaatggcaatagcattaag
ctgtttgacctggcaaaggccgttcactggattgtggacgacagcacctattccggcgaa
ggcggattgaaaagacgacgaatggcacccggtggagacgatagtgacgaagaaactgcc
attcctgcgccacccgtcaatgatgtgtatcgcttgaggcagcagaagagattcaaccga
taa
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integrated database retrieval system
