Aedes aegypti (yellow fever mosquito): 5567888
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Entry
5567888 CDS
T01053
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03022
Basal transcription factors
aag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5567888
09124 Replication and repair
03420 Nucleotide excision repair
5567888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5567888
03400 DNA repair and recombination proteins [BR:
aag03400
]
5567888
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
5567888
DNA repair and recombination proteins [BR:
aag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
5567888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5567888
NCBI-ProteinID:
XP_001651923
UniProt:
A0A1S4FDB7
Q176J9
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All DBs
Position
3:complement(396795774..396797929)
Genome browser
AA seq
487 aa
AA seq
DB search
MSAEAKSSKSTTSSLISKPANLECKNLEEYLKSRPPDALEKLYNYPAICLAVYRELPEIA
RQFVIRILFVEQAIPQAVVSSWGSQVYAKENVLVSRVLTELGVWRTAGLTGGLEAWELCP
TFKKNLKIALLGGGRPWSMSNALDPDQKSRDIEFLDAYAMSRWRCVLHYMVGAGSSKGME
GEGISPDAVRILLHANLMKRDETDGSPVITRQGFQFLLLDTQAQVWHFMLQYLDTCEARG
LDLAECLSMLFQLSFSTLGRDYSSEGLSQGLLTFLQHLREFGLVYQRKRKEGRFYPTRLA
HNITSKNAVQTIQEDGSSVQDKGYIIVETNYRVYAYTDSNLQVALLGLFTELLYRFPNLV
VGVLTRDSVRQAFRGGITAEQIISYLEQHAHPTMLNMEQAINSKSPLPPTVVDQIKLWEN
ERNRFTYTEGVVYNQFLSQGDFNTLRDYAQSIGVMTWQNERTRTMVVTKNGHDDVKRFWK
RYSKGGS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaggccaaaagctccaagagcacaacgtcctcgctaatcagcaaaccggcc
aacctcgaatgcaagaacctggaggaatatctgaaatctcgaccgccggatgccctggaa
aagctgtacaactatccggctatatgcttggccgtgtatcgagagcttcccgaaatcgca
cgacaatttgtgatacgtattttgtttgttgaacaagcaattcctcaggctgtggtgtct
tcctgggggtcacaggtgtatgccaaggagaacgttcttgtgtcgcgcgtgctaaccgag
ttgggcgtgtggcgcactgccggtttaactggaggactggaagcatgggaactgtgtcct
actttcaaaaagaatttgaagattgccctgctgggtgggggtcgtccatggtcgatgtcc
aatgccttggatccggatcaaaagtccagagatattgaattcctcgacgcgtatgccatg
tcccgttggcgatgcgtgttgcattatatggtgggagctggaagttccaaaggaatggaa
ggcgaaggaatttcaccggatgccgttaggattcttctacacgcgaatctaatgaaacga
gatgaaacagacggaagtccagtgattacacgacaagggttccagttcctgttgctcgat
acacaagctcaggtgtggcacttcatgctccagtatttggacacctgcgaggctcgtggc
ctagatttggcggaatgcctttccatgttgttccagttgagcttttccacactgggacgt
gactacagttcagaaggcttgagtcagggtctgctaactttcctgcagcatttgcgagag
tttgggctggtataccaacgcaaaagaaaagaaggtagattctacccgactagattggcg
cacaacatcacttcgaagaatgcagtccaaaccattcaggaagatggaagctctgtccag
gacaaaggatacatcattgtggaaaccaattaccgcgtgtacgcatacactgattcgaat
ctgcaggtagccttgctcggtttgttcaccgaactgttatatcgctttccaaatttggtg
gttggtgttctcaccagagattcagttcggcaagcttttcgaggaggcatcactgccgaa
caaataataagctatttggagcaacatgcacatccaacgatgctgaacatggaacaagca
atcaactcaaaatcgcctctgccgccgaccgttgtcgatcagatcaaactgtgggagaac
gagcggaatcggttcacctatacggaaggagtagtgtacaaccagttcctgtcccagggc
gatttcaacaccttgagagattacgcccaatcgatcggagtgatgacctggcagaacgaa
cgaacacgcacgatggttgtcacgaaaaatggccacgacgatgtgaagcggttctggaaa
cgttactccaagggtggcagttag
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