Aedes aegypti (yellow fever mosquito): 5571427
Help
Entry
5571427 CDS
T01053
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5571427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
5571427
03041 Spliceosome [BR:
aag03041
]
5571427
03009 Ribosome biogenesis [BR:
aag03009
]
5571427
03016 Transfer RNA biogenesis [BR:
aag03016
]
5571427
Enzymes [BR:
aag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5571427
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
5571427
Spliceosome [BR:
aag03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
5571427
Complex C
U4/U6.U5 tri-SnRNP related factors
5571427
Ribosome biogenesis [BR:
aag03009
]
Eukaryotic type
Pre-60S particles
Helicases
5571427
Transfer RNA biogenesis [BR:
aag03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
5571427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
nSTAND3
Death_3
ATPase_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
5571427
NCBI-ProteinID:
XP_021700747
LinkDB
All DBs
Position
2:269468259..269500138
Genome browser
AA seq
1035 aa
AA seq
DB search
MADVDDLFNLFDADNDDDDAGNVPIVVEQGDKAEAHRKDSPVPAKEESSGTKRELEDEND
DDVEESESNKRAKVESLLDDINLDNIESRIKVHTIQSPEACTHEVAVYPDHKYMPLVPPT
GKAAKEYPFVLDPFQKEAILCIENQQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTT
PIKALSNQKYREFHEEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWV
IFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCHIHKQPCHVVYT
DYRPTPLQHYLFPVGGDGIHLVVDEKGQFKDDNFNTAMAVLQNAGDAAKGDQKGKKGGLK
ATNSGETNIFKIVKMIMERNFAPVIIFSFSKKDCEIYAMQMSKLDFNSTTEKKLVDEVFN
NAMDVLSEEDRQLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETF
AMGLNMPARTVLFTGPRKFDGKDFRWVTSGEYIQMSGRAGRRGLDDKGIVILMIDEAVSP
AVGKEIVQGKPDPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQSSIPEIYKKV
QLKQKELESVHIKDEQSIVSYHHIRDQLDTLGKQFRDYITRPTYLIPFLQPGRMIKIQSD
AGEFEWGIIVNFKKETVDAKANPLKAETKVIIDVLLHVDDGFEKEGVPKPCPPNKRGSVE
VVPVLHTLVHRVSSLRVYYPNDLRPADNRRSVLKTINEVKKRFPDGPPLLNPINDMHIKE
KDFQTIVDMIDKFEKRLFSHPLHESPELDKLYTKYMEKLELERQLKQEKNAFREAKSLLH
MDELKHRKRVLRRLGYCTTADVIEFKGRVACELSCADELLLTEMIFNGTFTNLTTSQACA
LLSCFVCDEKSSEVPAATEELSGPLRQMQDLARRIAKVSNECKVDLDEERYVESFKPFLM
DVVLAWCKGSSFLQLCKMTDIFEGSIIRCMRRLEELLRQMVQASKTIGNTDLENKFSEAI
RLLKRDIVFAASLYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtcgacgacctgttcaacttgttcgatgccgataatgacgacgacgacgcg
ggaaatgtgcccatcgtggtggaacaaggggacaaagccgaagcacaccggaaggattct
cccgtgcctgccaaggaagaatcgtccggaaccaaacgcgagctggaagacgagaacgat
gatgacgtcgaagaatcggaatccaataaacgggcaaaagtggaatcgcttttggatgat
atcaatttggacaacatcgaatctcgcatcaaggtgcatacgatccaatcgccggaagct
tgcacacacgaggtagccgtttaccccgaccacaaatacatgccactggtacctccaacc
ggaaaggcagctaaagagtatcccttcgtgctggatcctttccaaaaggaggcaatcctg
tgcatcgagaaccagcagtcagttctggtatcggctcatacatctgcgggaaaaacggta
gttgccgagtatgcgatcgccaaatcacttgctgccaagcaacgagtcatctacaccact
cccatcaaagccctgtctaaccagaagtatcgagaatttcacgaagagttcaaagatgtt
ggtttagtcactggtgatgtgacgatcaatccttccgcctcctgcttgatcatgaccacg
gagattctacgaaacatgttataccgaggctcggaaattatgcgcgaggttggatgggtt
atcttcgacgaaatccattacatgagagacaaagagcgtggagtggtttgggaggaaacg
cttatcctgttaccggataatgtacattacgtattcctctcggctaccatcccgaacgct
cgacagtttgccgaatgggtttgccatatccataagcagccttgccacgtagtctacaca
gattatcgtccgacgccgttacagcattatctattccccgtcggaggcgatggaattcat
ttggttgtcgacgagaaaggacaattcaaggacgacaatttcaataccgcaatggcggta
ctgcagaatgccggagatgccgctaaaggggaccagaaaggcaagaagggtggactgaaa
gcgaccaattccggcgagacgaacatcttcaaaattgtcaaaatgatcatggagaggaac
tttgctccggtcattattttctccttcagcaagaaggactgcgagatctacgcgatgcag
atgtcgaagctggatttcaactcgaccacggagaagaagttggttgacgaagtgttcaac
aatgcgatggatgtgctgagcgaagaagatcggcagttgcctcaggtggaaaacgtgctc
cctctgctacgtcgaggaattggaattcaccacggtgggctgttgccaattctgaaggag
accattgaaatcttgttcggcgaaggcctgatcaaagctctgttcgcaacggagaccttc
gccatgggtctgaacatgccagcccgtacggttttgttcacgggtccacgtaaattcgac
ggtaaggatttccgctgggttacatcaggtgagtatattcagatgtcgggacgtgccggt
cgtcgtggtttggacgataaaggtatcgtaattttgatgattgacgaagctgtttcaccg
gcggtgggcaaagagattgttcagggcaaaccggatcccatcaattctgcgtttcatttg
acgtacaacatggtgttgaatctgctgagagttgaggaaattaatccggagtatatgttg
gaacgttcatttttccaattccaaaatcaatcgtctattccggaaatttacaaaaaggta
cagctgaaacagaaagagcttgagtcagtccatattaaagatgaacaatcgatcgtatcc
taccatcatattagagatcaattggataccctagggaaacaattcagggactacatcaca
agaccaacctatcttattcctttcctgcagccaggaagaatgatcaaaatccaatcagat
gctggagaatttgagtggggtataattgtaaacttcaaaaaagaaaccgttgacgcaaag
gctaatccgctgaaagccgaaacgaaggttatcatcgacgtgcttctgcatgtcgacgat
ggctttgaaaaggaaggtgtccccaagccatgccctccaaataaacgtggctctgtcgaa
gtcgtaccggttctgcataccctcgtgcatcgggtaagctccctccgcgtgtactatccc
aatgaccttcgccctgcggacaaccgacgatctgtcctgaaaaccatcaacgaagtcaag
aaacgtttccccgatggacctccactgctgaatccaatcaacgacatgcacattaaagaa
aaagattttcaaacaattgtcgacatgattgataagttcgaaaaacgattgttctcccat
ccgctacatgagtccccggaactggataagctctacacaaaatacatggaaaagcttgaa
ctcgaacgtcaactgaagcaggagaaaaacgccttccgggaagcaaagagtcttctccac
atggacgagttgaaacatcgaaaacgagtgcttcgtcgactgggctactgtacaacagcg
gatgttatcgaatttaagggacgtgtcgcctgcgaattgagctgtgccgatgaactcctg
ctcacagagatgatcttcaacggcacgtttacaaacctgaccacttctcaggcgtgtgcc
ctgctctcgtgcttcgtatgcgacgaaaagagctccgaagtaccagccgcaaccgaggaa
ctatccgggccgcttcgacagatgcaagacctcgcccggcgaatagctaaagtttcgaac
gagtgcaaggtagacctggacgaagagcgttacgtagaatcgttcaaaccattcctgatg
gacgtcgtgttggcgtggtgcaaaggttcttcgttcttgcaactctgtaagatgacggac
attttcgagggttccattatccgttgtatgagacggctggaagagctgctgcgtcaaatg
gttcaagcttctaaaacgatcggaaacaccgacttggaaaacaaattttccgaagcaatt
cggcttctcaagagggacattgtgtttgctgcttcgctgtatttgtaa
DBGET
integrated database retrieval system
