Aedes aegypti (yellow fever mosquito): 5571507
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Entry
5571507 CDS
T01053
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5571507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aag03041
]
5571507
Enzymes [BR:
aag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5571507
Spliceosome [BR:
aag03041
]
Complex C
Other components
Step II factors
5571507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
Flavi_DEAD
AAA_16
ABC_tran
cobW
AAA_7
ATPase
SRP54
AAA_33
AAA_23
Motif
Other DBs
NCBI-GeneID:
5571507
NCBI-ProteinID:
XP_021704110
LinkDB
All DBs
Position
1:137879267..137993401
Genome browser
AA seq
1196 aa
AA seq
DB search
MDKFSDVCKLEQSGSNVGGLIIKKKDKTAEKDVFKKPKASLLGLDRLAAAQRARKQQEAA
RLSFKDSDGNDMDEDEAGGKDYSERRERSKHSSSSSASSSSKQYRESAVETPSYTGGVSD
AARKRFNDRSKEDYHGKGLYASTKSKKDRDRDDDDDERKRHKFSSSSSRSRRGDSSHRTP
GHYKDEPQTPRSDRRMDAFGWEDDDERQASSSRKSSWDYPTPKLPKGSESVRSNRPSSSS
SSRRGREEDTPRPTPAHKYNKWAPDRKESGATPHGSKKNVPWESEEDKDLWEKEQVRLDR
EWYSIGEGYDEENNPFSGTSSEYLQKREEQLEQRRIKRMSAQQRQINKDNELWEKNRLLT
SGVVMSINFNEDFDEEAVERVHLLVHHTVPPFLDGRIVFTKQPEPVIPVKDATSDMAMVA
RKGSLLVRTYREQKERRKAQKKHWELGGTKLGNIMGVEKKQDDEDAKYDAETDTADYRKD
QKFADHMQAQDDSADFTKKRPIYEQRRSLPVFAVRQDLLNVIRENSVVIIVGETGSGKTT
QLTQYLHEDGYSRLGMIGCTQPRRVAAMSVAKRVSDEMNTKLGQEVGYAIRFEDCTSEKT
VIKYMTDGILLRESLRDSDLDGYSAVIMDEAHERSLSTDVLFGLLRDIVARRRDLKLIVT
SATMDATKFATFFGNVPTFTIPGRTYPVDVLFSKNVCEDYVDSAVKQALQIHLQQLEGDM
LIFMPGQEDIEVTCEVLAERLSEIENAPELSILPIYSQLPSDLQAKIFQRSAEGLRKCIV
ATNIAETSLTVDGIIFVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPG
QAFRLYTERQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNS
LYQLWILGALDHTGALTSLGRQMAEFPLDPPQCQMLIVANQMGCSAEILIIVSMLSVPSI
FYRPKGREEEADNVREKFQVPESDHLTYLNVYQQWKMNKYSSNWCNEHFIHIKAMRKVRE
VRQQLKDIYVQQRLKVQSCGTNWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCYLHP
TSALYGLGTTPDYVVYHELVMTAKEYMQCATAVDGFWLAELGPMFFSVKETGKSSREKRK
QAAEHLHQMESQMQKAQEQMEKQKQEEVERQQQQMIKQEIITPGATPRRTPSRIGL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggataagttttcggacgtgtgcaagttggaacaaagcggaagcaacgtcggcgggctg
ataatcaagaagaaggacaaaacggctgagaaggacgtgttcaaaaaaccgaaagcatcc
ttgctggggttggaccgattggccgcagctcaaagggcccgcaagcaacaagaagcggcg
cggctctcgttcaaagattccgatggtaacgatatggatgaggatgaggccggcgggaaa
gattactccgaaagacgagagagaagtaagcactcttcgtcatcttcggcctcatcctct
tcgaagcagtatcgggaaagtgcagtggaaactccttcctataccggtggagtgagtgat
gctgccaggaagaggttcaacgaccgttccaaggaggactaccatgggaaggggctttac
gcatcgaccaagtcgaagaaggatcgagatcgagacgacgacgacgacgagcggaagcga
cacaagttctcctccagtagctctcggagtcggagaggagattcctcgcatcgaacacca
ggccactacaaagatgaaccgcaaacgcctcgaagcgatcgccgtatggatgcattcgga
tgggaggatgatgatgaaaggcaggcttccagttcccgaaaatcgtcgtgggactatcct
actcccaaactgccgaagggttcggagtctgtacgaagcaatcgtccttcgtcgtcatcg
tcttccaggagaggtcgagaagaggacacacctcgtccgactccggcccacaagtacaac
aaatgggcaccagatcggaaggaatccggagcgaccccacacggcagcaagaagaatgtt
ccatgggagtccgaagaagataaggatctctgggaaaaggagcaggtgcgcttggatcgc
gagtggtacagcattggcgagggatatgacgaggagaataatccattctccggaacaagt
tcggaatatcttcagaaacgggaagaacagttggagcaacgtaggatcaagcggatgtct
gctcagcagcgtcaaatcaacaaggacaatgaactgtgggagaagaatcgtctgctcaca
tccggagtggtgatgtcgatcaatttcaacgaagattttgacgaagaagctgtggagcga
gtccacttgttagtccatcatacggttccaccttttttggatggccgaattgtgtttacg
aagcagccggaaccggttattcctgtgaaggacgcaacctcagatatggccatggttgct
cggaagggaagccttctggtgaggacctatcgagaacagaaggaacgtaggaaagctcag
aagaagcactgggagttgggtggcacaaagctcggaaacataatgggcgtcgagaagaaa
caggatgacgaagatgccaagtatgacgcagaaacagacactgcagactaccgcaaggat
cagaaattcgcagaccacatgcaagcacaggacgatagcgccgatttcaccaagaaaagg
ccaatctacgaacagcgaagatcgcttcctgtgtttgctgtgcgtcaagatctattgaac
gtgatccgtgagaactcggttgtaatcattgttggtgaaactggtagtggaaaaactact
cagctcactcagtatctgcatgaagatggctacagtcgattgggcatgattggttgcaca
cagcctcgaagagtggctgccatgtccgtggccaaacgtgtatcggatgaaatgaacacc
aagttgggacaagaggttggctatgcgattcgattcgaggattgcacttcggagaaaaca
gtcatcaaatatatgacggatggtattctactgcgtgaaagtttgagagacagtgatctc
gacggatactcagcggtcattatggatgaagctcacgaacggtcactctctactgacgtt
ctttttggactgctacgagatattgtcgctagaaggagagatttgaagctgatcgtcacg
tctgctactatggacgcaactaagtttgctacgttctttggtaacgtacctactttcacc
attccaggtcgaacctatccggtagatgtcctgttcagcaaaaatgtctgtgaagattac
gtggactctgccgtcaagcaagccctccaaattcatcttcagcagctggaaggggacatg
ttgattttcatgcccggtcaggaagatattgaagtcacgtgcgaagtacttgccgaacga
ttatctgaaattgaaaacgcccccgagttatcgatcctcccgatctattcacaacttccg
tccgacttgcaagcaaaaattttccaacgctctgctgaaggcctccgcaaatgtatcgtt
gctacgaacatcgccgaaacttccctgaccgtcgacggaatcatcttcgtcatcgattcg
ggctactgcaaacttaaagtctacaatccaaggattggtatggatgccctgcagatctac
cccatctcccaagctaacgcaaaccaacgttctggtcgtgccggaagaactggaccggga
caagctttccgtctctacaccgaacgccagtacaaagacgaactgctcgctctgaccgtt
ccggaaattcaacgaaccaatctagccaacaccgtactcttgctgaagtctctgggtgtt
gtagacctcctccaattccatttcatggatccaccccctcaggacaacatcctcaactcg
ctgtaccagctttggattctgggagcgctggatcacaccggagccctgacgtcgctcggt
cggcaaatggccgaatttccgctcgatcctccccagtgtcaaatgctgatcgttgccaac
cagatgggatgcagtgcggagatcttgattatcgtatcaatgctctccgttccttcgatt
ttctaccggcccaaaggaagggaagaggaagcggacaacgtgcgagaaaagtttcaggtt
ccggaatcggatcatcttacatacctcaatgtgtaccagcagtggaagatgaacaagtat
tcatcaaactggtgcaacgagcattttattcacatcaaagccatgcgcaaggtgcgggag
gttcgccaacagctcaaggatatctacgtgcagcaacggctcaaggtgcaatcctgcggc
accaattgggacatcgttcggaagtgtatctgttcggcttacttctaccaagcggcccga
ctgaagggcatcggcgagtacgtcaatctgcgcacgggtatgccttgctacttgcacccg
acgtcggctctgtatggtctgggcaccacgccggactacgtggtgtaccacgagttggtg
atgacggccaaggagtacatgcaatgtgctaccgctgtggatgggttctggcttgccgag
ctgggacctatgttcttttcggtgaaggaaaccggcaaaagcagtcgagagaagaggaag
caggcagctgaacatttgcaccagatggaatcccaaatgcaaaaggcacaagaacagatg
gaaaagcagaaacaggaagaagttgaacgtcaacagcaacagatgatcaagcaagagatc
atcactccgggagctactcctaggagaactccatctcggataggcttgtga
DBGET
integrated database retrieval system
