Aedes aegypti (yellow fever mosquito): 5572560
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Entry
5572560 CDS
T01053
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5572560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
5572560
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
5572560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR11_2nd
PEP5_VPS11_N
Beta-prop_DCAF4
PROPPIN
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
5572560
NCBI-ProteinID:
XP_001654074
UniProt:
Q16UJ0
LinkDB
All DBs
Position
3:122146823..122192065
Genome browser
AA seq
985 aa
AA seq
DB search
MEFSQPPPDPMGGGSYANPPPINRILSYQNPQSQKPQHNFYHHRPYHHFNGFRGGLPMTQ
DDFDGKRLRKSVMRKTVDYNASIIKALETRTWARDYRDRRALQPENIYIPELLPPPSYMD
NPTNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH
DVSVRTMVWSHNDNWMVTGDHSGYVKYWQSNMNNVKMFQAHKEPIRGISFSPSDSKFASC
SDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKIWDPKSNVA
LATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQVFRGHKKEASAVSWH
PVHEGLFASGGSDGSILFWNVGTDKEVGGIDNAHESIVWTLAWHPLGHILCSGSNDHTIK
FWTRNRPGDQMRDKYNLNTLPASLAGLDECELDDHVVIPGMGPEDKIDIADSLGTNNNGV
IPGLDFANVTNFNEKMREKKIPYSKPIPRNFQAQWNEASKYEEHREASEEIKEVISQIVE
SNPGALPLKKMAPTAIILYDRVIPILPGSDLEAAILEGPASLNRFIIMGRIPDLHDIIPP
INEEDFNNLDDTRIKLEIDPTFIYNKATVIEPSEPPEATEPLLSSTSLMKRRTPPPPAPD
PTAGIPSLLQLDIFPPPDIKFSTDEVEDEMALRNSKKGREREKQKEKERREQEEEKKFWA
EHNEKNWDEEDMGNSGYPSPRRSPIDSHTTNSNGQWTTAKYSSINDEGSGLGGNSWEMEV
DRPSSLGGDNSKDNNSRDGFGFGNQSKNLNFNQGPSNNFGGPNNFASANFNSGPNTFGPG
PNNFNSRPNNFGSGPNAFGQGPPNAFGPGPNNFNPNNFNPNGPPGMAPNFNSGPPPNFNS
GPPGNFNFNGPPPPPGGFNNNFGAGPPPNNFNNFGNNGGNFGPDHGGNNDDGGWNNNRGG
NRNRNNMRGGRGNQRGGFRGGNRRN
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagttttcgcaacctccgccggatccgatgggagggggaagttatgccaatccgccc
cccattaatcgcatactgagctaccagaatcctcagtcgcaaaagccccagcacaacttt
taccatcatcggccgtatcatcacttcaatggtttccgcggcggacttcccatgacgcag
gatgatttcgacgggaaacggcttcgtaagtcggtgatgcgtaaaactgtcgattacaat
gcatcgatcatcaaagcgctggagactcgcacttgggcacgtgattaccgcgatcgacgg
gctctccagcccgaaaatatctacattccggagttgctaccgccaccaagttacatggat
aatccaaccaacgcggtcacgacgcgcttcgtcaaaacggccaccaacaaaatgcgttgt
cctattttcacgcttgcatggactccggaagggcgacgtcttgtgaccggtgccagttct
ggagagtttacgctgtggaatggactgacgttcaatttcgaaacgattctacaggcccat
gacgtatccgtgagaacaatggtgtggtctcacaacgacaactggatggtgacaggcgac
cacagcggctacgtcaagtactggcaatccaacatgaacaatgtgaaaatgttccaggct
cacaaggaacccatccgtggaatcagcttcagtccgtcggattccaagtttgccagctgc
agcgatgacggcacggttcgtgtctgggatttccttcgttgtcaagaggaacgtgttctg
agaggtcatggcgcggatgtaaaatgtgtccactggcatccgcagaaagcgttgatcgtt
tccggaagcaaggataatcaacagccaatcaaaatttgggatccaaagagtaatgtagcg
ttagctactctgcatgctcacaaatcgaccgtcatggatcttaagtggaacgacaacgga
aactggctggtcacagcttcgcgagaccacttgctgaagttgttcgatttgcgaaatctg
agcgaagaggtccaagtcttccgcggtcacaaaaaggaagccagtgcggtatcgtggcat
cctgttcacgagggtctgttcgcctcgggtgggtccgatggatcgattctgttctggaac
gttggaactgataaagaagtcggtggaatcgataacgcccacgagagtatagtgtggacg
ttagcgtggcaccctctgggtcacatcttgtgttccggatcgaacgaccacacaatcaaa
ttttggaccagaaatcggcccggtgatcaaatgcgagacaagtacaatctcaacacattg
ccggccagtttggctggtttggacgaatgcgaactggatgatcacgtcgtcattccgggt
atgggcccagaggacaaaatcgacatcgcggacagtttaggaacgaacaacaatggcgtc
attccgggtttggactttgccaacgtaacgaatttcaacgagaagatgagggagaagaaa
attccctacagcaaaccgattccgcgtaacttccaagctcagtggaatgaggccagtaag
tacgaagagcaccgcgaagcgtccgaagaaatcaaagaagtcatatcgcagattgtcgaa
agcaatccaggagcgctgccgcttaaaaagatggcacctacagcgattatcctgtatgat
cgagtcatccctattctacctggttccgatttggaagctgccattctggaaggtcctgca
tcgctgaacaggttcatcataatgggcaggattccagatcttcacgacatcataccgcca
atcaacgaggaggatttcaacaacttggacgataccaggataaaactggaaatcgatccc
accttcatctacaacaaagcgactgtaatcgaaccatcggaaccaccagaagcgaccgaa
ccgttgctctcgtccacatcgttgatgaaaagaagaactcctccaccacccgcaccagat
ccgactgcaggtataccatccttattacagctggacatattccctccaccagacatcaag
ttcagcacggatgaagttgaagacgaaatggccctaagaaacagtaaaaagggcagagaa
cgggaaaagcagaaggaaaaagaacgtcgggagcaggaagaggagaaaaagttctgggct
gaacataacgagaagaactgggacgaagaggatatgggtaatagtggctatccatcgcct
aggaggtcccctatagacagtcatactaccaatagtaatggacaatggaccaccgctaaa
tatagctcaattaatgatgaaggttccggactaggaggcaactcgtgggagatggaagtt
gatcgccctagtagtttaggaggggacaatagcaaggacaacaacagcagagatggattt
gggtttggcaaccaatcaaaaaatctcaacttcaaccaaggtccttcgaacaactttggt
ggtccaaacaactttgcttccgcaaatttcaattcgggcccaaatacctttggccctgga
ccaaacaacttcaacagcaggccaaacaatttcggctcgggtccgaacgctttcggacaa
ggtccaccaaatgcttttggacccggacccaacaactttaacccgaacaacttcaatccg
aatggccctccgggaatggcacctaacttcaattcggggccaccaccgaacttcaactct
ggaccgccgggcaatttcaacttcaacggaccgccgccgccgccaggtggttttaataat
aacttcggtgcaggccctccgccgaacaatttcaacaacttcggcaacaatggtggcaat
ttcggtccagatcacggaggaaacaatgacgacggtggatggaataacaaccggggtggt
aatcgcaacaggaacaacatgagaggtggccgaggtaaccaacggggtggattccgaggt
ggcaatcggaggaactaa
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integrated database retrieval system
