Aedes aegypti (yellow fever mosquito): 5572577
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Entry
5572577 CDS
T01053
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
aag
Aedes aegypti (yellow fever mosquito)
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aag03037
]
5572577
Cilium and associated proteins [BR:
aag03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
5572577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
5572577
NCBI-ProteinID:
XP_021713034
LinkDB
All DBs
Position
1:206733181..206893090
Genome browser
AA seq
2252 aa
AA seq
DB search
MSGRRDVKVVFIEISELCCATKVNDKQIIFCNNFQRRRRLRNKDDEPPASTGTSLRGSVP
RRLSTGADAEAGCFRIVAAVAVDSSHLLDFLLIDEPSSSGIISRNRSKLEPEPVSEDIGR
LLEFAGSGPAAAWSDCSDDSGSVRLVLGSAGGSASEGSARKRTRDTQGLPPRGNFRRTSL
GSDYFEQFCVKCRIYLLENFQKFRSNFSIMSRLSGKECAPSISSRHLGEGGGGAGGGNSG
DRKKPFSRPFNKSRLEPSSSAGGTGRMSSPSPTDTSTLMRQNNELRQRLQEEASTYRRRL
ETYKQAQNNQAALVSRLQAKVLQYKQRCSELEQTPTSSTCPSYNVRDHSPGRHHAAPSAG
PICSSVGAPMSLPPCPVARERSRSRSRSQSPCRKYADGSHDEVRHQLDEERRRCEKLLVE
NSCLRQQLEESHRTNEALTNDLQKLTADWESLNKELLNKEDEWKEEEQAFNDYYNNEHTR
LLKMWREVVNVKRMFKEMVSTTKVEMGRMQLELTGTGREVVGACSGVSVNLKQTSKIEEA
QQMHIERENMDLKSQLSDLRMQHENAKLEIAQRDQRLQQMLQDLKLMEERYVQVESQAGQ
TQRLNDELERLQSALRDIAHAVVQDAETTATAEAETTSTHHLHLSQSSGMPAPPRSPKRG
AIRTSQAFAEGTISAVQAALHKYQLAIHDLQVKLQSNTDALSATRKQFENCEHTRDVLSG
KVGELTEKLDSANHQLSELYKERDSLQKTLDGLRSDKHSVERGKAELNSIVDSLNTDYEK
LQNVNSKLQKMYDSLEEEKKMLESELQRVQKDKDIQEMSLRAEEERSSRLREETITLREE
LNKLYLSRDLLEQQRIESDGLLNMIEKQKIELEYELDRIINEKDGLHMTLEKKSSSNDHL
EVEIKQLKASVLQLEDERTKLKTQVSDQGVDLAALKKELISAEQARLDLDSEKLAISERL
KCLEMEKDKVEQDLSCVARERNDLSNQLAAISRKKETIGEEVMRLRQRLEQANEMNARLN
RNLEELVKENEEKAVVIEGHEKELQRLQEQLASLRSEKDSLEAVLFDTNTSLEEAEARKD
ALERENQDLLIKQESHKALIGRLNKDLENAERRAQDIKIQLTNAAANQEAEFLQKLSNLR
TFGEENIKKLNEEKEAIRNSLEKRMSQALQALENGKDAEIQTLKEQFEALQMHLEALNQQ
HEEVVLRAENEKQQALLIAHRDKQAVMEKLDATARELKLELDNGDRLKREMVARQEKDRT
TIGCLRDEIAKMRTKMEEARIRAEEELNRLEVVQGALRDEKDAALKEIEELKVQLRLTED
RCDGVSLQLQDTQRKLKEAENCIDATRKELTDTRRTLADSNIERDKYANSNKELRDHVKR
VEGQRREQARSMDDALQKIAGLEESRNLLEQEKVRLQTILKETENNMTKLNKDLSTAQTD
IQKFQSQSTQNDAAEKELQARLTNESEEKERILQELHQIKKQMSDLEGTLCATRQELGRA
RCKANQDEHRFHQREQELCARIEEGRGREKRLEDQKHNLEVCLADATQQIQELKARLGGS
EGRVRALDEQLVHLDAIKKETENKLSSIGHTLRRIAGIQMDGSVSLPYRLLSPSRRYSPA
RGRSDRDEFHHHHHHHHHHQQQETRSLSGDNAIIDVDPEMVRKGVRTLMQQVAQIERERD
DFKMQLCTAKKQLQEGGDNQMRLEGKICKLQQHNRAIHEDKTNLEAKLAQKTTALQTTEE
TLRQKSDDLNITREKAAHLEQSLSTTAEEKSQLEERLEKCRQNACRLESDKRHLQDELAR
TEGRASKLDLQRVALEGDIQRLQMALQEKDCTIRNLQERLENHQRSGTQLEDRCAALKST
VDQLKERLQAAAITETELRGEIAGLQRHNTDQGHTFALGQDKLKQLQKTLTNSENERRVL
SERLDASQHTINELRRSQQATQDQTQRLQEQIAECEVQKSALESQLRLAKWNQENAEQFG
GGTGGDQDLARQLVNSQRDRTELRNKLEAMKEKVRHMENEKLGLEKSGSKFSGHVQFDRS
EKSLLGDSGELDSNRLESSGYGGMGTGSAKYSCGLDHAQIEQESRDLRMKVRRMETLLAE
KEAELARAKAKMLESPSKSSMSGYGGGGVGAASSEIERHRNAQVQAERLLDAREQSHRQQ
VLRLENQISMLREQLAQEAKRRQMYILRSSRAGREMQQLRQTLGDSLRNVTQEPIDSSLL
ESEARRLDSAVSMSLPPTTSRDLDRSLSPTYR
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgcagggacgtgaaggtggtgttcatcgaaattagcgaactgtgctgcgct
accaaggtgaacgataaacaaattatcttctgtaacaacttccaacgacgacggcggcta
cgaaataaggacgacgagcctcctgcaagtactggtacgagccttcgaggttcagttcct
cgtcgtttgtcaaccggtgcggatgcggaagcaggttgttttcggatagtggcagcggta
gcggtcgatagtagtcatttgctggatttcttactgattgatgagccatcatcatctggg
atcataagtcgaaatcgatcgaagttggaaccggaaccagtgagcgaagacattggccgg
ttgttggagtttgcgggaagcggtccggcggccgcctggagtgattgcagtgacgattcc
ggaagtgtacggctagtgctgggcagtgcaggtgggagtgctagtgagggaagtgccagg
aagcgaacacgggacacccaaggattaccgccgagggggaattttaggcgaacttcgctc
ggaagcgactactttgagcagttctgtgtaaagtgtcggatttatctgttggaaaacttt
caaaagtttcggagcaacttttcaattatgtcacgtttgagcggtaaggaatgcgcacct
agtatatcctcgcgccatcttggtgaaggtggtggtggtgcgggaggtggaaattctggg
gaccgcaagaagccattttcgcgcccattcaacaagtcccgtttggaaccgtcctcgagt
gccggtggaacaggcaggatgtcgagcccatccccgacggataccagcaccctcatgcgg
caaaataacgagctgcgtcaacgtctacaagaggaagcaagcacctatcggcgccggctg
gaaacgtacaagcaagctcagaacaatcaagccgctctggtcagcagactgcaggccaag
gtcctacagtacaagcaacgctgcagcgagctggagcaaactcccacttcaagcacttgc
ccgagttacaatgtccgggatcactcaccagggcgacatcacgctgcaccctctgcagga
ccaatttgcagctcggtgggcgctccgatgagtttgccgccgtgtccggtggcacgggaa
cgatcacgatcccgctctcggtcacagtctccgtgtcgcaagtatgccgatggaagtcac
gatgaagtccgccatcaacttgacgaggaacgacgaagatgcgaaaaactactggtcgaa
aactcctgcctgcggcagcagttggaggaatcacatcgaaccaacgaagcactaaccaat
gatctccagaagcttaccgccgattgggaaagcttgaacaaggaactactgaacaaggag
gacgagtggaaggaggaggagcaggccttcaacgattactacaacaacgagcacacgcgg
ctactgaaaatgtggcgcgaagtggtcaacgttaaacgcatgtttaaggagatggtgtcc
accaccaaggtggagatggggcggatgcagctggagctaacgggcaccggacgcgaagtg
gtcggtgcctgcagtggggtttccgtcaatctgaaacagacctccaaaattgaagaagcc
caacagatgcacatcgagcgggaaaacatggatctgaagtcgcaactcagtgatctgcgg
atgcaacatgagaacgccaagctggaaattgcccaacgtgatcagcggctgcagcagatg
cttcaagatctcaaactgatggaagaacgttacgtccaagtggagagccaagccggacaa
acacagcgcctcaatgatgaactcgaacgcctgcagagtgccttgcgggacattgcccac
gccgtagttcaggatgcagaaacgacggccactgctgaagccgaaaccacatccacacat
catctgcacctttcgcagtctagtggaatgccagcgccgccacgttcccccaaacgaggt
gccattcgcacgtcgcaagcatttgccgagggaaccatttccgcggtacaagctgctttg
cacaagtatcagctggccattcacgacttgcaggtcaagctgcagagcaataccgatgcc
ctgtcggccacgcgcaagcaattcgagaactgtgaacacacccgcgatgttctgtccggg
aaggtgggtgagctgaccgaaaaactggactcggccaaccatcaactgtctgagctgtac
aaggagcgggatagcctgcaaaagacgctagacggcctccgaagcgacaagcacagcgtc
gaaaggggaaaagccgaattgaactcaattgtggacagtttgaatacagactatgaaaag
ttgcagaatgtaaacagcaaattgcagaaaatgtacgattccctggaggaagagaagaaa
atgttggaaagcgagctacagcgagtgcaaaaggacaaagatattcaggagatgagttta
agagctgaggaggaacgttcgagcagactgcgcgaagaaaccatcaccctgcgggaggag
ttgaacaagctctacctgtcacgtgatttgctcgagcagcaacgaatcgaatccgatgga
ctgctcaacatgattgagaagcagaaaatcgaactggaatacgaactggaccggatcatc
aacgagaaggatggcctgcacatgacactggagaagaagagttcctccaatgaccacctg
gaggttgaaattaaacagctcaaggcgtccgtcctgcagctggaggacgaaagaaccaag
ctgaaaacccaggtgtccgaccagggcgttgatctggcggcactgaaaaaggaactgatt
tccgccgagcaggcccgactggacttggactcggaaaagttggccatcagcgagcggctg
aagtgtctggagatggagaaggacaaagtggagcaagatttgagttgtgtggcgcgagaa
cgcaacgatttgagcaaccagctggcagcgatttcccgcaaaaaggagaccattggggaa
gaagttatgcgtttgcgacagcggttggaacaggcgaacgaaatgaacgcccgattgaat
cggaacctggaggagctggtgaaggaaaacgaggagaaggctgtggtcatcgaggggcac
gagaaagagctgcaacgattgcaggaacaactggcttcgcttcgcagcgaaaaggattcc
ctggaggcggtactgttcgacacgaacacatcgctcgaggaagccgaagctcggaaggat
gctctcgagcgggagaatcaggatctacttatcaagcaggaatcgcacaaggcactgatc
ggtcgactcaataaggatttggaaaatgccgaacgtcgggcccaagacatcaaaatccaa
ctgaccaatgcggccgccaaccaagaggccgagtttctccaaaagttgtccaatttgcgc
actttcggcgaggaaaacatcaagaagttgaacgaggagaaggaagccattcgcaactcg
ctggagaagcgaatgagccaagctctacaggcgttggagaatggcaaggacgctgaaatt
caaactctgaaggaacagtttgaggcactgcagatgcatctggaggcgctgaatcagcaa
catgaagaggtggtcctgcgggccgagaatgagaagcagcaggctctgttgattgctcac
cgggacaagcaagcagtaatggagaagttagacgcgaccgcacgagagctcaagctggaa
ctggacaacggcgatcggttaaagcgcgagatggttgcccgtcaggagaaggaccggaca
acgatcggttgcctgagagatgaaatcgccaaaatgcgcaccaagatggaagaggcaagg
attcgagcggaagaggaactgaatcgactcgaggttgtacagggggcattgcgggatgag
aaagatgctgcattgaaggaaatcgaagaactgaaggttcagttacgactgacagaagat
cgatgcgacggggttagtttgcagctgcaggacacccagcgaaaattaaaggaagctgag
aattgtattgacgctacaagaaaggagttaactgatacacgtcgaacattagcggacagc
aacattgagcgggataagtatgccaacagcaacaaggagctacgagaccacgtgaaacga
gtcgagggacaacgccgggagcaagctcgatcaatggacgatgctttgcagaagattgca
ggattggaagagtcccgcaatctactcgaacaggaaaaggtccgcttgcagaccatcctg
aaggaaacggaaaacaatatgaccaaattgaacaaggatttatccactgcccaaaccgac
attcaaaagttccagtcccaatcgactcaaaacgatgccgcggagaaggaactacaggca
cgcctaacaaacgaatccgaagagaaggagcgcatcttgcaggaattgcatcaaatcaaa
aagcaaatgtctgatttggagggaacgctgtgcgccactcgtcaagagttgggcagagct
cgttgcaaggcaaatcaagacgagcatcgattccaccagcgagagcaggagttatgcgct
cgtatagaggaaggcagaggacgtgaaaagcgactggaagatcagaagcataatctggaa
gtgtgtttggccgatgcaacacaacagatccaggagctcaaagcacgactcggaggttcg
gaaggacgcgttcgtgctttagatgaacaattagttcacttggacgcgatcaaaaaggaa
acagagaacaaactaagctcgattggccatacgttgagaaggattgccgggattcaaatg
gacggatcggttagcttgccgtatcgtctactcagtccatctagaagatatagcccggct
cgcggtcgcagcgatcgagatgagtttcaccaccaccaccaccatcaccatcatcatcaa
caacaggaaacgagaagcctttcgggagacaatgcaatcatcgatgtcgatccagaaatg
gtacgcaagggtgtgcgtacgctaatgcaacaggtggcgcaaatcgagcgcgaaagagat
gatttcaagatgcaactttgtactgcgaaaaagcagcttcaagaaggcggagacaatcaa
atgcgtttggaaggaaagatttgtaaattgcaacagcacaatcgggctatccacgaggat
aagaccaatttggaggccaagctagcgcagaaaactactgcgttgcaaaccaccgaggag
acactcagacagaaaagcgacgatttaaacataacgcgagagaaggctgcccatttggag
caatctctcagcactacggccgaggagaagagtcaactggaagaacgcttggagaaatgc
agacaaaacgcctgtcgcttggagtccgacaagcggcatctgcaggacgagttggctcgc
acagaaggacgtgcatcgaaacttgatctccaacgcgtcgctctcgagggagatattcaa
cgtttgcagatggcactccaggagaaagactgtactatcagaaaccttcaagaacgcttg
gagaaccaccaaagatcgggaacgcagctggaagatcgatgtgccgcgctcaagagtacg
gttgatcagttgaaggaacgcctgcaagcggcagccattactgagaccgaactacgaggg
gaaattgccggattgcaacgtcataacaccgaccaagggcatacattcgccctgggacag
gacaaacttaagcaactccagaaaactcttaccaatagcgagaatgagcgtcgagttctt
tcggagcgcttggacgcctcacagcacaccatcaatgagcttagaagaagccagcaagcg
acacaagatcaaacgcaacgtttgcaagagcaaatagctgaatgtgaagtacagaagtcg
gctcttgagtcacagctgcggctagccaagtggaatcaggagaatgccgaacagtttggc
ggtggaactggtggagaccaggatcttgcgcgacaattggttaactcacagcgggaccgt
accgagctgagaaataagctggaggccatgaaggagaaggttcgtcacatggagaacgaa
aagcttggtttggagaagagtggcagcaaattttctggccatgtgcagtttgatcgatcg
gagaagagcttgctgggagattctggggaactggattcgaatcgcttggagtctagcggt
tacggtggtatgggaaccgggagtgcaaaatacagttgcggtctggatcatgctcagatc
gagcaagaaagccgagatttgcgcatgaaggtacgtcgcatggaaactctgttggccgaa
aaggaagccgagctggcgcgggccaaggcaaaaatgttggaatcgccgagcaagtctagc
atgagtgggtatggaggaggtggtgttggtgcagctagttctgaaatcgagcgtcaccga
aatgctcaagtacaggccgaacggctgctggatgccagagaacagtcgcatcgacagcaa
gtgcttcggttggaaaatcaaatctcgatgttgagagagcagctggctcaggaagcaaaa
cgtcggcagatgtatattctgaggagctcgcgtgccggtcgagagatgcaacagctgcgt
caaacgctcggcgattcgttgcgaaatgttacacaggagccgatcgactcgtcactgttg
gaaagtgaagccagacggttagacagtgctgtatcgatgagcttgccgccaacgaccagt
agagatttggaccgtagtttgagtcccacgtatcgctaa
DBGET
integrated database retrieval system