Aedes aegypti (yellow fever mosquito): 5573279
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Entry
5573279 CDS
T01053
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5573279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aag03041
]
5573279
Spliceosome [BR:
aag03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
5573279
Complex C
U5 SnRNP specific factors
5573279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
FAT
Iml2-TPR_39
ARM_TT21_N
HTH_OrfB_IS605
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
5573279
NCBI-ProteinID:
XP_001654491
UniProt:
Q16T65
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All DBs
Position
2:complement(182506095..182509326)
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AA seq
931 aa
AA seq
DB search
MAHIPATSLGSKSKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
AAKRKKKEEEEEDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKR
KEYREKRLKEDLERYRQERPKIQQQFSDLKRNLIAVSEDEWANLPEVGDSRNKKQRNPRA
EKFTPLPDSVLSRNLGGESTSTIDGRSGLASMIPGVSTPGMLTPSGDLDLRKIGQARNTL
MNVKLSQVSDSVAGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVQMARNLIMRGCEVNPLSEDLWLEAARLQPPDTAKGVIAQAARHIP
TSVRIWIKAADLETEVKARRRVFRKALEHIPNSVRLWKAAVELENPEDAKILLSRAVECC
NTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIVDRA
LSSLSANGVEINRDQWLQEAMESEKSGAIKCCQAIVKAVISVGVEEEDRKQTWIDDADHC
AKEGAFECARAVYNYALSEFPSKKSIWLRAAYFEKNHGSRESLEALLQKAVAHCPKSEVL
WLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEFERARRLLAKARA
SAPTPRVMMKSAKLEWALNNLEDALSLLEDAVKVFPDFAKLWMMKGQIEEQKNLLERAVD
TYNSGLKKCPNSIPLWLLLSSLEEKRKLLTKARSVLERGRLKNAKNPILWLAAIRIEIRG
GFKDMANTLMARALQDCPNAGELWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKL
FWSERKIQKCRDWFNRTIKIDPDFGDAWAYFYKFELQHGTEQQQEDLLERCVAAEPKHGE
EWCRVSKDIANWCFKTDEVLKAVVKILPTPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacattccggctacatcactgggaagtaaaagcaagaagcactttctcggtgtt
ccggctcctcttggctacgtcgccggtgtaggaagaggcgcaaccggtttcaccacccgt
tctgatattggtccagctcgagatgccaacgatgtttcggatgaccgtcacgcaccccca
gcagcaaaaagaaagaaaaaggaggaagaggaggaggatgacgaggacctgaacgattcc
aactatgacgagttcagtggctacagtggttccttgttttccaaagacccctacgacaaa
gatgacgccgaggcagatgccatctacgaaagtatcgataaacgtatggacgaaaaaagg
aaggaatatcgcgagaaacgcttgaaagaagatttagaacgataccgccaagagcgtcca
aagattcaacagcagttttcagatttaaagcgtaatttgattgcagttagcgaggacgaa
tgggctaatttgccggaagttggagacagtcgtaacaagaagcaaaggaatcctagggct
gagaaattcactcccttgccggacagtgttctgtcgagaaatttaggtggagagtcgacc
agcacgatcgacgggagatctggtttggcatcaatgattcctggtgtttcaacgccggga
atgctgacccctagtggggacttggatttacggaaaataggacaggcaaggaacaccttg
atgaacgtaaaactatcacaagtatctgattctgtcgcaggacagacggttgtcgatccg
aaaggatatttgaccgatcttcagagtatgattccaacatatggtggagatattaacgac
ataaagaaggcaagattgttattgaaaagcgttcgagagaccaacccaaatcatcctcca
gcttggattgctagtgctcgtttggaagaagttacagggaaggttcaaatggcacgtaat
ttgattatgcgaggctgcgaagtgaatcctctgagtgaagacctttggttagaggcagca
cgtctacagcctccagatacggctaaaggagttattgctcaagctgcccgacacattcct
acatcagtaagaatttggataaaagcagccgatttggaaaccgaggtcaaagccagaaga
cgtgtattccgcaaggctttggaacatattccgaactctgtcagattgtggaaagcagcc
gtcgaattggagaatcctgaagacgcaaaaatcttgctttcgagagcggtggaatgttgc
aacacaagtgtcgaattgtggttagctttggctcgattggaaacgtatgagaatgcacgt
aaagtgttgaataaagctcgtgaaaatattccaaccgataggcaaatttggacaactgct
gccaaactagaggaagccaacggaaacattcacatggtggagaagatcgttgatcgtgcc
ctgagttcgctcagtgccaatggagtggaaatcaatagggatcagtggctgcaggaagct
atggaatcggagaagtcaggagccataaaatgctgtcaggcgattgtgaaagcagttatc
tctgttggtgtagaagaagaggatcgtaagcaaacctggatcgatgatgctgatcactgc
gctaaagaaggtgcatttgaatgtgcccgtgctgtgtacaattacgcgctgtctgaattc
ccttcgaagaagagcatttggttacgtgcagcttatttcgaaaagaatcatggatctcgt
gaaagcctggaagcacttttgcagaaagctgttgcccattgtccaaagtcagaagttctc
tggttgatgggagccaaatccaaatggcttgcgggagatgtaccagcagctcgtggtatt
ctatcgcttgcttttcaagccaatccgaattcggaggacatttggcttgctgctgtgaag
ttggaatcggaaaattccgaattcgagcgtgcgcgtcgattgttggccaaggcaagagca
agtgctccaactccaagggtcatgatgaagtcagccaaattggaatgggctctgaacaat
ttggaagatgccctcagcctcctggaggacgccgttaaagtattcccagattttgcaaaa
ctttggatgatgaaaggtcaaattgaagaacagaaaaatttactcgaacgagcagtcgac
acatacaattcgggtctgaaaaagtgtcccaattctattcccctttggctgttgttatca
tctctcgaggaaaaacgaaaacttctcaccaaagcccgttctgttttggaacgtggtcga
ttgaaaaacgccaaaaaccccattctatggctggcagctattcgaatcgaaattcgcgga
ggcttcaaagatatggctaataccctcatggcacgtgctttacaagactgcccgaatgca
ggtgagctgtgggcagaagccattttccttgaaccacggccacagcgaaaaaccaaatca
gttgatgcgctcaagaagtgcgaacacgatccgcacgttttgctggctgtttccaagctc
ttttggagtgaacgcaaaattcaaaagtgtcgcgattggttcaacagaacgatcaaaatc
gatcccgatttcggcgatgcttgggcgtacttttacaaattcgagctgcaacatggaacg
gaacagcaacaggaggacctgttggagcgatgtgttgctgcagagccgaagcatggcgaa
gagtggtgtcgggtaagcaaggatatcgccaactggtgcttcaaaacggacgaagtactg
aaagcggtggtcaagattctacctactccgatttag
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