Aedes aegypti (yellow fever mosquito): 5574086
Help
Entry
5574086 CDS
T01053
Name
(RefSeq) collagen alpha-1(XV) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
aag
Aedes aegypti (yellow fever mosquito)
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aag04147
]
5574086
00535 Proteoglycans [BR:
aag00535
]
5574086
00536 Glycosaminoglycan binding proteins [BR:
aag00536
]
5574086
Exosome [BR:
aag04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
5574086
Proteoglycans [BR:
aag00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
5574086
Glycosaminoglycan binding proteins [BR:
aag00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
5574086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
5574086
NCBI-ProteinID:
XP_021696134
LinkDB
All DBs
Position
2:complement(31586446..32566652)
Genome browser
AA seq
1184 aa
AA seq
DB search
MKYLPTFERWFERIPFLCLLLTYVQSSSVAASELALFGGQGIRDVFAEFDLLLAIKIPPE
DGITFVDGSDGFPAFGVAPHADIKSPYRTILPEKLTEFTIIATVRPGSRSGGYVFSVVNP
LDTVVQLGLLLEPILATDQWNITLIYTDANVERVSQPLVSFQIPYTKSWIKLIFKVLNNQ
VVFYNNCVETETVVVKKEPRSLTFDGASTLYIAQAGQILKRNFEGTLLFLKLYGNPEIVK
THCNRTATELDDSSNVIYEEDDFLGDGDALGGELFSDGISASSGDDDDSFDLPMISPPPP
EYGYRSKGEKGERGPKGPPGDAIRGPPGPPGPHGPPGPPGPPGAAGPRGPGLLDEGSGDD
AKRLSQLFDIQNNNLLNKCYCNVTEVIEDLKRDITLREYLRGPEGPQGREGKTGSPGLTG
ATGPPGERGVAGLKGDKGDRGEPGLPGVEGIQGSKGEPGLDGIPGPAGLPGSPGPPGIPE
NFDMSWNPSRMFKESMLGAPGIQGLRSASPGSKGEPGDKGDVGLPGPKGEHGSKGERGDP
GLIGAKGERGHTSIGAPGPKGSVGPPGVPGIPGQTGSTGTKGDKGNSGDVGPAGPPGPPG
MVVYADVKNSTGTTDCHCQPGPPGPAGPRGPSGFDGAPGLPGETGLPGHPGLPGDKGERG
SPGPKGEKGPEFIINENAAFNSSRSNKGEKGERGPRGRRGKPGPIGPPGRPAGPSDMGTN
SWSGRPGPKGDQGPKGDVGPRGEKGDRGRDGMDGRPGPPGLPAASGDNIQYIPMPGPPGP
PGPPGSPGIPGVSIAGPKGEPGMDSRSPYYGDPNYGGRQGSRSSFDELKQLRELKHHREL
EDSTAGPPGPPGPPGAPGRGYHHDSSDEIPSSYGSNVRIVPGAVTFQSTEAMSKMSSTSP
VGTLAYIIDEEALLVRVNKGWQYIALGTLVPIATPAPPTTTVIPPPHRPDLQASNLINNI
PQPIEGPSFTASPEYESQWYPRMLRMGALNEPYSGDIQGIRGADYACYRQARRAGLLGTF
RAFLSSRITNLDTIVRIADRELPVVNTRGDVLFNSWNSIFNGQGGYFPQTPRIYSFSGKN
VLTDISWPQKLVWHGASALGERAMDTYCDAWHTASPDKVGMASSLLGNKLLDQDRYSCDN
RFIVLCVEALPHDQRRKRDTYSHTYEFTNEHDYSRHLAEVMKQA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatttaccgacatttgagaggtggttcgaaagaataccctttctgtgcttactg
ctgacctacgtgcaatcatcgtccgtagcagcatcggagctggctctgtttggtggtcag
gggatcagagatgtcttcgcggagttcgacctgctgttggcgatcaaaatccccccggag
gacggcatcacgttcgtggacggatcggacgggtttccggcttttggcgtggccccgcat
gcggacatcaaatccccctaccggaccatcctgccggagaagctgaccgagttcacgatc
atcgcgacggttcggcccggctcccgctccggtggctacgtttttagcgtggtcaatccg
ctggacactgtggtccagctggggctgctgctggaaccgattctggcgaccgatcagtgg
aacatcacgctgatctacacggatgccaatgtggaacgggtcagccagccgttggtgtcc
tttcagatcccgtataccaagtcgtggatcaaattgatcttcaaggtgctcaacaatcag
gtagtgttctataataattgcgtcgagacggagaccgttgtggtcaagaaagaaccgaga
tctttaacctttgacggggcctccacactgtacatagcccaagcgggccagattctgaag
cggaatttcgagggaactctactgttcctgaagctgtacggcaatccggagattgtcaag
acgcactgtaaccgaacggcaaccgagctagacgactctagtaacgttatctatgaggag
gatgactttctgggggacggcgatgcccttggaggggaactattttccgacggcatcagt
gcgtcaagcggagacgatgacgattcgttcgatctaccgatgatttcaccacccccacca
gagtacggctaccggtccaagggtgaaaagggcgagcgaggacccaagggaccaccgggc
gacgccatacgagggcctcctgggccaccgggtccccatggtccaccagggccaccgggg
ccacccggagcagcagggccccgaggtcccggtttactcgacgaaggatccggcgatgat
gcgaagagattatcccagctcttcgacatacagaacaacaacctgctgaacaagtgctac
tgcaacgtgacggaagtcatagaggacctcaaacgggacatcaccctgcgcgagtacctt
cgtggtcccgaggggccacaaggccgcgagggcaaaaccggctcgccaggattgaccgga
gcaacgggaccccccggtgaaaggggtgttgccggtctgaagggcgacaaaggagaccgc
ggagagcccggattacccggggtggagggtatccagggtagcaaaggcgaacccggtttg
gatggcattccgggtccagctgggctacctggatctccaggaccgccgggtattcccgag
aatttcgatatgagttggaatccatcgcggatgttcaaggaatcgatgctgggagcacct
ggcatccaagggctgcgaagtgcatctcccggctccaagggcgaaccgggtgacaagggc
gacgtcggcctaccgggccccaagggcgaacacggcagcaaaggggaacggggcgatccg
ggcctcatcggtgccaagggagaaaggggtcacacatcgattggagcaccgggaccgaag
ggatccgttggtccaccgggagtgccgggaattcctggccagaccggttcaaccggaacg
aaaggagacaaaggcaacagcggagatgtgggcccagcagggccacctggaccacccgga
atggttgtgtacgcggacgttaaaaactccaccgggacgacggattgtcactgtcaaccg
gggccaccgggtccagccgggccacgggggccatccgggttcgacggagcgccagggttg
ccaggagaaaccggtcttccaggtcacccaggtctaccgggcgacaaaggcgagcgaggc
agtcccggtcccaaaggggaaaaaggacccgaattcatcatcaacgaaaatgccgcattc
aactcatcccggtcgaacaagggtgaaaagggcgaacgggggccccgtggaaggcgtggc
aaacccggtcccatcgggccaccaggaaggccggccggtccaagtgacatgggcaccaac
tcgtggtcgggacgaccgggaccgaaaggagatcaaggaccaaaaggggacgtcgggccc
cgcggcgagaaaggcgatcgcggcagagacggaatggatggccgacccggtccaccggga
cttccagcagcatcgggtgacaacattcagtacattccaatgcccggccctccaggacca
ccagggccaccgggttcccccggcataccaggagtttcgatagccggaccaaaaggcgaa
cctggaatggattcacgcagcccctattacggagatccgaactatggcggaagacaagga
agccgctcaagctttgacgaactaaagcagcttagggaactgaagcaccacagggaacta
gaagatagtacggccggacccccaggacctccgggaccacctggcgcaccggggcgaggc
taccaccacgacagcagcgacgaaatccccagcagctacggttccaatgtgcgtatcgta
ccgggagccgtcaccttccagagcaccgaagccatgtcaaagatgtcttctacgagcccc
gtcggaacgcttgcctacataattgacgaggaagccctgctggtgcgggtgaacaagggc
tggcagtatatcgcactcggcactctggtcccgatagcgacgccagcgcccccaacgacc
accgtgattccaccgccccaccggcctgacctgcaggcctccaatctgatcaacaacatc
ccccaaccaatcgaaggaccctccttcacagcgtccccggaatacgaatcgcagtggtat
ccccgaatgctgcggatgggagcacttaacgaaccgtactcgggcgacatccagggcatc
cgtggagcagattatgcctgttaccggcaggcgcgacgggccgggctcctgggaacgttc
cgggcgttcctgtcgtcgagaataacgaatctggacaccatcgtgcggatagcggaccga
gagcttccagtagtgaacacccgaggcgatgtgctattcaactcgtggaatagcattttc
aacggccagggtggctacttcccgcagaccccgcggatatacagctttagcgggaagaat
gtcctcaccgacatcagctggccccagaagctggtgtggcacggtgccagtgccctcggt
gaacgtgcgatggacacgtattgcgacgcgtggcatacggcctcgccggacaaggtcggc
atggccagcagcttgctcggcaataaattactcgatcaggaccggtactcctgcgataat
cggttcatcgtgctctgcgttgaggcgttaccccatgaccagcgacggaaacgggacact
tatagtcacacgtacgagtttaccaatgagcacgattacagccgccatcttgccgaagta
atgaagcaagcgtaa
DBGET
integrated database retrieval system
