Aedes aegypti (yellow fever mosquito): 5574518
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Entry
5574518 CDS
T01053
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5574518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aag03041
]
5574518
Enzymes [BR:
aag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5574518
Spliceosome [BR:
aag03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
5574518
Complex C
U5 SnRNP specific factors
5574518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
SWI2_SNF2
HTH_61
AAA_19
PhoH
nSTAND3
Motif
Other DBs
NCBI-GeneID:
5574518
NCBI-ProteinID:
XP_021708213
LinkDB
All DBs
Position
3:51327401..51372479
Genome browser
AA seq
2141 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVLSLVGKLEGTRMGDRAQRTK
PEKTEERKAKRQKRDEAQYDFNSMKGATLLTEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEAIGDQPRDILCGAADEILAVLKNDKLKDRERKREIDGLLGTVTDERFALLVNLGKKIT
DFGSDSTSGATGVTEGEQIDDTYGINVQFYESEEESDEDKYGEIRDDDVQDEGEEARDDG
ILHAENLGGNEESKKEKALDPRDIDAHWLQRCLRKYYNDSIMSQAKAGEVLGVLKDAGDD
RECENQLVLLLGYDCFDFIKLLKKNRQTILYCTMLASSQSESERVKIREKMKSDAFLAKI
LRQLDTGKQEMEDYDSEKSKMQRRRKEQDDDNMEGIGGQIPGNRNVLELDELAFTQGSHL
MANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFDEEEELMVIDKLPKYVQPVFAGFKTLN
RIQSRLYKTALESDENLLLCAPTGAGKTNVALLTMMREIGKHINDDGTINVDEFKIIYIA
PMRSLVQEMVGNFGKRLATYNLTVSELTGDHQLSREQIAATQVIVCTPEKWDIITRKGGE
KTYTQLVRLVIIDEIHLLHDERGPVLESLVARTIRNIETTQEDVRLVGLSATLPNYHDVA
TFLRVRPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGKNQVL
VFVHSRKETGKTARAIRDMCLEKDTLGSFLREGSASMEVLRSEAEQVKNAELKDLLPYGF
AIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWV
ELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKMPDMLN
AEIVLGTIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRADLVHTAAL
HLEKSGLIKYDRKSGHFQVTEIGRIASHYYCTHDTMLTYNQLLKPTLSEIELFRVFSLSG
EFRNITVREEEKLELQKLMERVPIPIKESMEEPSAKVNVLLQAYISQLKLEGFALMADMV
YVTQSAARLLRAIFEIVLHREWAQLADKCLTLCKMIDRRMWQSMSPLRQFRKMPEEIVKK
IEKKNFPWERLYDLEANEIGELIRVPKLGKTIYKYVHQFPKLELSTHIQPITRSTLRVEL
TITPDFQWDEKIHGQSEAFWILVEDVDSEVILHHEYFLLKAKYCQDDHLVKFFVPVFEPL
PPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALREPNFEALYA
DKFPQFNPIQTQVFNAVYNSEDNVFVGAPTGSGKTTIAEFAVLRMLQQNPHGRVVYLVSR
DSLAELIFMDWHQKFGQHLGCKVVKLTGETGTDLKLIAKGQIIVTTADKWDILSRRWKQR
KNVQNIQLFIVDELQLIGGEEGPVLEVVCSRMRYISSQIEKQIRIIALSASLSDARDVAQ
WLGCNANATFNFHPSVRPIPLELHVQGFNITHNASRVAAMSKPVYNAITKFSPHKPVIVF
VSSRKLARLTAIDILTYCAAEAQPNRFFHAEEDDIKPFLDRMTDKTLKETLSQGVAYIHE
GLTPSDHRIVEQLFDSGAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDYPVT
DVMQMVGRANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRLHDHFNAEIVT
KTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVESTLSDLEQSKCI
SVEDEMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDVVVRH
HEDNILKSLAQRLPNKLTGPNGTAPKYNDPHIKTNLLLQAHLSRLQLGAELQGDTEQSLG
KAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNADIIKRCQEK
NIETVFDIMELDDEDRIRLLQLNDQQMSDVARFCNRYPNIEMTFEVVEKDRIHSGSSVNV
VVNLEREDDVTGPVIAPFFPQKREEGWWIVIGDPKTNSLLSIKRLTLQQKAKFKLDFVAP
SPGHHDYTLYFMSDSYLGCDQEYKFSINVGDFQSESESESD
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcagcggcacgccagctgcagtacgagtacaaagcgaactcgaacttggtc
ttgcaagcggatgtgcggttgatcgagcggccacggcgagatgaagccaccggtgaggtg
ctgtccctggtgggaaagttggagggaacccggatgggagaccgagcgcagcgaaccaaa
ccggagaagacggaagagcggaaggcaaagcgtcagaagcgtgatgaagcgcagtacgac
ttcaacagcatgaagggggccaccctgctgacggagggaatcgacgagatggtcgggatc
gtgtaccgtccaaaaacgcaggaaactcgccaaacgtacgaagttttgctcagcttcatc
caggaggccatcggcgaccagccgagggacatcttgtgcggtgcggccgatgagatcctg
gccgtgctgaagaacgacaagttgaaggaccgggagcggaagcgggagattgatggcctg
ctggggacggtcacggacgaacggttcgccctgttggtcaacttgggcaagaagatcacc
gactttgggtcggattcgacttcgggggcgaccggagtgaccgagggggaacagattgac
gacacttacgggatcaatgtgcagttctacgagtcggaggaggagagtgacgaggacaag
tacggagagatccgggacgatgatgtccaggatgagggcgaggaggcacgggatgatggc
attttgcatgctgagaatctcggtggcaacgaagagagcaagaaggagaaggccctggat
ccgcgggacattgacgcccattggctgcagcgatgcctgcgaaagtactacaacgattcc
atcatgtcgcaagccaaggccggtgaagtgctgggcgtcctgaaggacgctggagacgat
cgggagtgcgagaatcagctggtccttctgttgggctatgactgtttcgatttcattaaa
ctgctgaagaagaatcgccagacgatcctgtactgcacgatgctggcctcgtcacagagc
gagagcgagcgggttaaaatccgggagaagatgaagtcggatgcgtttctggcgaaaatc
ttgagacagctagataccgggaaacaggagatggaggactacgacagtgagaagtccaag
atgcagcgcaggaggaaggagcaggatgatgataacatggaaggtatcggagggcagatt
cccggtaacaggaacgtgctggagttggacgagttggctttcacgcaggggtcccatctg
atggcgaacaagcgttgtcagctgccggacggaagtttcaggaaacagcgtaagggatac
gaggaagttcatgtccctgccttgaagccgaagccgttcgacgaggaagaggaactgatg
gtgatcgataagctcccaaaatacgttcaaccggtcttcgccgggttcaaaacgctgaac
cgcatccagagtcgtctgtacaagacggcgctggagagcgacgagaatctgctgctgtgt
gccccgacgggagccggtaagaccaacgtggccctgctgacgatgatgcgggagatcggg
aagcacatcaacgacgacggcacgatcaacgtggacgagttcaagatcatctacatcgct
ccgatgcgatcgctggtacaggaaatggtggggaatttcgggaagcgtttggccacgtat
aatctgacggtttcggaattgacgggtgatcaccagctgagtcgggagcagatcgccgcc
acgcaggtgatcgtgtgtactccggagaaatgggacatcattaccagaaagggaggcgag
aagacctatacccaattggtaaggttggtgatcatcgatgaaatccatctgctgcacgac
gaacgtggtccggttctggaatcgttggttgctcgtacgattcgtaacattgagaccact
caggaagacgtccgcctggtgggactttcagcaaccttgcccaattaccacgacgtagca
accttcctgcgcgtccgccccgaaaccggtctgttctacttcgacaacagctttcggccg
gtcgctttggagcagcagtacatcggagttacggagaagaaagcactgaaacggtttcag
gtgatgaacgacatcgtctacgagaaggtcatggagcacgccgggaagaaccaggtcctg
gtgtttgtccactccaggaaggaaactggcaaaaccgctcgcgccattcgcgacatgtgc
ctggagaaagatacgttgggaagcttcctgcgggaaggttcagccagtatggaagtcttg
cgatcggaagctgagcaggtcaagaacgccgaactcaaagatttgctcccgtatggcttc
gccatccatcatgccggtatgactcgcgtggacagaaccctggtcgaagatctgttcgcc
gatcgtcacattcaggtcctggtgtccaccgcaaccctagcttggggtgtcaacttgcct
gctcacaccgtcatcatcaagggaacccagatctacaacccggagaagggccgctgggtc
gaactgagcgctctggacgtgctgcagatgcttggtcgagccggtcgtccccagtacgat
accaagggcgaaggcatcctgatcaccaaccacagcgaactccagtactatctttccctg
ctgaatcagcagctcccgatcgagtcccaactcgtgtccaagatgcccgacatgctcaac
gccgagatagtcctcggaaccatccagaacgtcaaggacgcagtcacctggctcgggtac
acctatctctacatccgcatgctgcgtcaaccaactctctacggcgtctcctatgacgcg
atcaaggaagatccccttctggaacacttccgtgccgatttggtccacaccgcagccctg
cacctggagaagagcggtttgatcaagtacgatcgcaagagcggacacttccaggtcacc
gaaatcggacgcattgcgtcccattactattgtacccacgacaccatgctaacctacaac
caactactcaaaccgaccctcagcgagatcgagctcttccgggtgttctccctgtccggc
gagttccgcaacatcaccgttcgcgaagaggaaaagctcgaactccagaagctgatggag
cgcgtccctatcccgatcaaggaaagcatggaggagcccagcgccaaggtcaacgtcctc
ctgcaagcctacatctcccaactcaagctggaaggattcgccctgatggccgacatggtc
tacgtgacccaatccgcggcgcgtcttctccgtgcgatcttcgagatcgtcctccaccgc
gaatgggcccaactcgcggacaaatgtctcaccctgtgcaagatgatagaccgccgcatg
tggcaaagtatgtctccgctgcgccagttccgcaaaatgcccgaagagatcgtcaagaag
atcgagaagaagaacttcccctgggagcggctgtacgatctggaggcgaacgagatcggt
gaactgatccgcgtccccaaactgggcaaaaccatctacaagtacgtgcaccagttcccc
aagctggaactgtccacccacatccaaccgatcacgcgatctactctgcgggttgagctc
acgatcaccccggacttccagtgggacgaaaaaatccacggccaatcggaagccttctgg
atcctggtcgaagacgtcgattcggaagtgatcctccatcacgagtacttccttctgaag
gccaagtactgccaggacgatcacctggtgaagttcttcgtcccggtttttgaaccactc
ccgccgcagtacttcctgagaatcgtgtccgatcgttggatcggcgccgaaacacaactc
cccgtctcattccgtcatctgatcctgccggagaagaacctcccgcccacggagctactt
gatctgcagccccttccgatcagtgcccttcgggagccaaacttcgaggcgttgtacgcg
gacaagttcccgcagttcaacccgatccaaacgcaggtcttcaacgcggtctacaacagc
gaggacaacgtttttgtgggcgccccaaccggatccggtaaaaccacgatcgcggaattt
gccgttctgagaatgctgcagcagaacccgcatggtcgggtcgtctacctggtgtcgagg
gacagtttggccgagttgattttcatggattggcaccagaagttcgggcagcatttgggc
tgcaaggttgttaagttgaccggtgaaaccggaacggacttgaagctgatcgccaaggga
cagatcatcgttacgactgcggacaagtgggacatcctgtcgcgtcgttggaagcagagg
aagaacgtccagaatatccagctgttcatcgtcgacgagctgcagttgatcggcggggag
gaaggtccggtcctggaagttgtgtgctctcgtatgcgatatatctcttcgcaaattgag
aaacagatccgtattatcgcgctctcagcttctctctcggacgcgagggacgtcgcccaa
tggttgggatgcaacgcgaacgctaccttcaatttccatccgagcgttcgtccgatccca
ttggagttacacgtccagggattcaacattactcacaacgcttcgagagtggcagccatg
tccaagcccgtctacaacgcgatcacaaagttcagcccgcacaagccagtgatcgtgttc
gtttcttctcgcaagctagcgcgcctgacggcgatcgacattttgacgtactgcgcggct
gaggctcaaccaaaccggttcttccacgccgaagaggacgacatcaagccgttcttggac
cgtatgaccgacaagaccctgaaagaaactctctcacaaggcgttgcctatatccacgaa
ggcttgacgccgtccgatcaccgaattgtggaacagctgttcgactccggagcggtccag
atcgccgttgtcacccgggatctctgctggggcttgaacatctccgcatatctcgtggtg
atcatggacactcagttctacaacggcaagagccattcctacgacgactacccagtcacg
gacgtcatgcagatggtcggccgggccaatcgccctctggaagacgacgacgccaagtgc
gtcctgatgtgccagagctccaagaaggacttcttcaagaagttcctcaacgaaagcctc
ccggtcgagagccacctcgatcaccgtctgcacgatcactttaacgcggaaattgtcaca
aaaaccatcgagaataagcaggacgccgtagattacctcacctggacgttcctttaccgt
cggctgacccagaatcccaactactacaaccttcagggcgtgacccatcggcatctgtcc
gatcacctctcggaactggtcgagagcaccctgtccgacctggaacaatccaagtgcatc
agcgtcgaagacgaaatggacacgctaccgctgaacctgggaatgatcgccgcgtactac
tacatcaactacaccaccatcgagctgttcagcttgtcgttgaacagcaaaacgaagatc
cgaggcctgctggagatcatttcgtcggcggcagagtacgaggacgtcgtggtgcgacac
cacgaggacaacattctgaagagtttggcccagaggttgccgaacaagctgaccggaccg
aatggaacggctcccaaatacaacgacccccatatcaagaccaacctgctgcttcaggcc
cacctctcccgtctacaactgggtgccgaactgcaaggcgacaccgagcaaagtctcggc
aaagccattcgtctcatccaggcctgtgtcgacgtcctatcctcgaacggatggctttcg
ccggccgtggccgccatggagctggcccagatggtcacccaggccatgtggagcaaagat
tcctacctgaagcagttgccgcacttcaacgcggacatcatcaagcgctgccaggagaag
aacatcgagacggtgttcgacatcatggagctggacgacgaagatcgcatccggttgctg
cagctgaacgatcagcagatgtccgacgtggcccggttctgcaatcgctatccgaacatc
gaaatgaccttcgaggtggtcgaaaaggaccgcatccactccggatcgtctgtcaatgtg
gtggtcaatctggaacgcgaggatgatgtgaccggaccggtgattgcgccattcttcccg
cagaaacgcgaggaaggctggtggatcgtgatcggtgacccgaagaccaactcgctcctg
tcgatcaagcggctcaccctgcagcagaaggccaagttcaagctggactttgtggcgccc
agtccgggccaccacgactacacgctgtacttcatgagcgattcgtacctgggttgcgat
caggagtacaagttcagcatcaacgtgggcgacttccagtccgagtcggaaagcgagtcc
gactag
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integrated database retrieval system
