Aedes aegypti (yellow fever mosquito): 5577281
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Entry
5577281 CDS
T01053
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
5577281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5577281
Enzymes [BR:
aag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
5577281
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
5577281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
SURF2
Motif
Other DBs
NCBI-GeneID:
5577281
NCBI-ProteinID:
XP_021706774
LinkDB
All DBs
Position
3:complement(371166637..371200986)
Genome browser
AA seq
1694 aa
AA seq
DB search
MTIDQNLDVNLDPTNLQFSVFSSEDIKRISVTKIVTQRSFDELGHAIPGGLYDAAMGPSG
KGEVCATCVKDMNQCEGHFGHIEICVPVFNPFFVKTVYNLLRICCTDCFRLQIHDSMKSL
LELQLQLVDAGYIVEAEELEVFKQKVALAPVGDLPEGISYYTEMLMKHPYNKLGNTKNSE
AIRNAIVNSTMKECIKKLCIHCKSPMQKVRVSNKRLVFSMTRAEMRAFYEKKGMSDVADE
KTKATNRIIFAEECQRYFYELYKNDGALLDLLFPILKNSARTMKHPVDMFFMDVVPVQPP
LVRPVRRVDGMEILEHPQTAILRNILMANATLRAVLVMSKKDDAEGESASTLEAEMKKVY
ESAKGGSAYEKLYNAWVELQSYVDMSLDINMALDKSKARGFGLKQIIEKKEGLVRMHMMG
KRVNYAARTVITPDPNIGVDEIGIPITFAKRLTYPVPVTSWNVAELRKMVLNGPDNYPGA
NSIEDSNGQVSRISALNVTQRESVAKTLLTPHSSNDQGVKIVHRHLLNGDVLLLNRQPTL
HRPSIMAHKAKILSGEKIFRLHYSNCKSYNADFDGDEMNAHFPQSELARSEAYNLVAVPH
QYLVPKDGTPLGGLIQDHIVSAVKIFIRGKFFNRDDYQQLVFQALSNHRGDIDLLPPTIL
KPARLWSGKQIISTIIKNIIPKKMPHINMIGSAKLGNKHWQTEPAREWHAGGTPLTGNQM
SESEVIIRNGELLVGILDKNHFGATPYGLIHCMYELYGGHCSTLLLSSLSRLFSYYLQWE
GFTLGVKDILVQKHADKKRAKIIKACRQVGHETAASALDLPPDVSAEELNSKMEEAYAKN
PKFRAILDRKYKTALDSFTNQINEVCLPGGLITKFPDNNLQLMVQSGAKGSTVNTMQISC
LLGQIELEGKRPPLMISGKSLPSFASFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREG
LIDTAVKTSRSGYLQRCLVKHLEGLNVNYDMTVRDSDNSVVQFMYGEDGMDISKAQFIET
PKHLKFLDLNRDAIVQTETVKSLANDEDLNDQILRHVKKMKSWRKKHGDCLQKVRVSPFT
KYSSEHSEEIRAAVSDPDRLKSKSGRTRLTEKIVKKWHKADPSLKAKYAKKYSRCPDPTF
SLFRPDSCFGSLTEHLEQLVQTYNKSQTPLHDMDELMKVKNSYALAAPGEPVGLLAAQSI
GEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASQRIKTPSMEIPFRAFKSHKKLNT
AAERMRKTLNRVTVADVLQDIHVNSRLVLRPSRGMQHTVRFTFLPQDAYAHDYRVEPKQI
LKYMSGSFFKYMFRIISRSAKSKNVLIEIEQESKAKQTESTENDDLVDSRAPNVSTRLEE
DPDESSDDEAGGNEDEADATESKLKNKQSDEVGYDTDEDDDEEKDEDEMQDSLEDKEKES
GEAPKEAEEAEEDEVVNEEDMDDELGATDTVLEDEAIRMHVMKTSELINDFVFDKKEHRW
CQVTFHMPLKYKDIDFTKILRDIAEKCVVWEIPNIRRAITYVQNDQLYLKTDGINIYAMT
KFYKSLDLNRLYSNDIYAIAQTYGIEAAARVIVKEVQNVFKVYGITINPRHLLLVADYMT
ADGTFKSMSRKGMESNVSPLQQISFESSIQFLKAAALKGNGDHLDSPSSRLMVGQLCKSG
TGAFSVYSKVQAAA
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaccagaatctggacgtgaatttggacccgaccaatctgcagttttccgtg
ttcagctcggaggacatcaagcggattagtgtgacgaagatcgtgacgcagcggtcgttc
gatgagttgggccatgccattcccggaggattgtacgacgcggccatgggccctagtgga
aagggggaagtttgtgctacttgcgtgaaggatatgaatcagtgcgagggccactttggg
catattgagatttgcgtgccggtgttcaatccgttcttcgtcaagacggtgtacaatttg
ttgcgcatttgctgtacggattgcttccggctgcagattcacgactcgatgaagagtttg
ctggaattgcaacttcagttggtggacgctgggtatatcgtggaggcggaggagctggag
gtgtttaagcagaaggtggcgttggcaccggttggggatttgcccgaggggatcagctac
tacaccgagatgctgatgaagcatccctacaacaagctgggaaacacgaaaaactcggag
gccattcggaatgccatcgtaaacagtacgatgaaggagtgcatcaagaagctgtgcatt
cactgcaagagtcccatgcagaaggttcgggtatccaacaaacgcctggtgttcagtatg
acccgggcggagatgcgggcgttctacgagaagaaaggcatgagcgacgtggcagatgag
aagaccaaagccacgaaccggataatcttcgccgaggagtgccaacgctacttctacgag
ctgtacaaaaacgacggcgctttgttggatctgctgttcccaattctgaagaacagcgcc
cggacgatgaagcacccagtggatatgttcttcatggacgtggtcccggtgcagcctccg
ttggttcgtccagtgaggcgcgtcgatggcatggagatcttggaacatccgcagaccgcg
atcctgcggaatattctgatggcgaacgcgacgctgcgagcggtgttggtgatgagcaag
aaagacgatgcagaaggtgagagcgcttcaacgctggaggcggagatgaagaaggtctac
gagtccgccaaaggtggttctgcctacgagaagttgtacaatgcttgggttgagcttcag
agctacgtagatatgtcattggatatcaatatggctttggacaagagcaaggctcgtgga
tttggcctgaagcagatcatcgagaagaaggaaggcctggtaagaatgcatatgatggga
aagcgagtgaactatgccgcgcgaacggtcatcactccggatccgaacatcggagtggac
gaaatcggaattccgatcacgtttgccaaacgactgacgtatccagttccggtgacttcc
tggaacgtcgcagaactgagaaagatggtgctgaacggtcccgataactacccaggagcg
aacagcatcgaggattcgaacggacaggtgagcagaatatccgcactgaacgtgacacag
cgggagtctgtggccaagaccttgctgacgccgcacagctcaaatgatcaaggagtgaag
atcgtacaccgacacctgttgaatggagacgtcttgctcctaaatcgtcaaccaactctc
catcggccgagtatcatggctcacaaggcgaagatcctcagcggcgagaaaatcttccgg
ttgcactactccaattgtaagtcctacaacgctgatttcgacggcgatgaaatgaatgcc
cactttccgcagagcgaattggctcgcagcgaagcgtacaatctcgtagccgttccccac
caatatctggttccgaaggacggaactcctctgggaggcctgattcaggatcatatcgtg
tccgccgtgaaaatattcattcggggaaagttcttcaaccgtgatgattaccaacagctg
gtattccaggcattgtccaaccatcgcggagacatcgatcttcttccgccgaccatcctg
aaacccgccagactctggtccggcaagcagatcatttccacgatcatcaagaacatcatc
cccaagaagatgccgcacatcaacatgatcggatcagccaaactcggcaacaaacactgg
caaacggaaccggctcgggaatggcacgccggaggtactcccctaaccggtaaccaaatg
tctgaatcggaagtgatcattcgcaacggagaactccttgtcggaatcctcgacaagaac
cacttcggcgccactccgtacggtctaatccattgcatgtacgagctgtacggcggccac
tgctccacccttctcctatcgtccctttcccgacttttcagctactacctccagtgggaa
ggtttcaccctcggcgtcaaggacatcctcgtccaaaaacacgccgacaaaaagcgagcc
aagatcatcaaagcctgtcgacaggtcgggcacgaaacggctgcttccgctttggatctt
cctccggacgtctccgccgaagagctgaactccaaaatggaagaagcctacgccaagaac
ccaaagttccgcgcgatcctcgatcgcaaatacaaaaccgcactggactccttcaccaac
cagatcaacgaggtatgcctcccgggaggtttgatcaccaagttccccgacaacaacctc
cagctgatggtgcaatccggtgcgaagggttccaccgtgaacaccatgcagatctcctgc
ctgctgggacagatcgaactcgagggcaagcgacccccgttgatgatctccggcaagtcg
ctgccgagtttcgcgagctttgagacatctcccaagtccggtgggttcatcgatggacgc
ttcatgactggtatacaaccgcaggatttcttcttccattgcatggctggccgtgaaggt
ttgatcgataccgccgtcaagaccagtcgttccggatacctccagcgttgtttggtgaag
catctcgaaggtctgaacgtcaactacgacatgaccgtgcgggacagcgacaacagcgtg
gtccagttcatgtacggcgaagacggcatggacatctccaaggcccagttcatcgaaacc
ccaaagcatctaaaattcctggatctgaaccgtgacgcgatcgttcaaacggaaaccgtg
aaatctctcgctaacgatgaagatctgaatgatcaaatcctgcgccacgttaagaaaatg
aaatcctggcgtaagaagcatggcgactgccttcaaaaggtccgcgtctcgcccttcacc
aaatattcctcggaacacagcgaggaaatacgcgcggccgtttccgaccctgaccgtctg
aaatccaaatccggacggactcgtctcaccgaaaagatcgtcaaaaaatggcacaaagca
gacccctccctaaaagccaaatacgccaaaaaatattcccgctgtccggatccaaccttc
tcgctgttccgcccagacagttgcttcggttctctgaccgagcacctcgaacagctagtc
cagacctacaacaaatcccaaactcccctgcacgatatggacgaactgatgaaggtgaaa
aacagctacgctctggccgcccccggtgaacccgtgggacttctcgccgcgcaatccatc
ggagaaccgtccacccagatgaccctcaacacgttccactttgccggtcgtggtgaaatg
aacgtgaccctcggtatccctcgacttcgggaaatcctcatgttggcctcgcagcgcatc
aagacgccttcgatggagatccccttccgggcgttcaagagccataagaagctgaacacc
gctgcggaacggatgcgcaagaccctgaaccgggtgacggtggccgatgtgctgcaggat
atccacgtcaactcgcggttggtgttgaggccgtcccgcggaatgcaacacacggtgcgg
tttaccttcctgccgcaggacgcctacgcgcacgactaccgggtggaaccgaagcagatc
ctgaagtacatgtccgggtcgttcttcaagtacatgttccgcatcatcagccggtccgcc
aagagcaagaatgtgctgatcgaaatcgagcaggaatccaaagcgaaacaaaccgaatca
acagagaacgacgatttggtggacagccgtgcaccgaacgtgtccacccgattggaggaa
gacccggacgaaagctcggatgacgaggccggtggcaacgaagacgaagccgacgcaacg
gaatcgaagctaaagaacaagcaaagcgacgaggtgggttacgatacggatgaggatgat
gacgaagaaaaggacgaagacgaaatgcaagattccttggaggacaaggaaaaggagtcg
ggcgaagcaccgaaggaggctgaagaagcggaagaggatgaggtggtcaatgaggaggac
atggacgatgaattgggtgcgaccgatactgttctggaagatgaagcaattagaatgcac
gtcatgaagacaagcgaactgatcaacgatttcgtgttcgacaaaaaggaacatcgctgg
tgccaggtcactttccatatgcctttgaagtataaggacattgactttactaagattctg
cgcgatattgctgagaagtgcgtcgtatgggagattccgaacattcgtcgggccatcacc
tacgtccagaacgatcagctgtacttgaaaaccgatggcatcaacatctacgcgatgacc
aagttctacaagagtctggacctgaaccgactctattcgaacgacatctacgccatcgcg
cagacgtacggaatcgaggcggccgctcgggtcatcgtgaaggaggtgcagaacgtgttc
aaggtctacggcatcacgatcaatccgcgccacttgctgctggtggcggactacatgacc
gcggacgggacattcaagtcgatgagccgcaagggaatggagagcaacgtgtccccgctg
cagcagatttcgtttgagtcgtcgatccagttcctgaaggcggccgcgctgaagggaaat
ggagatcatctggattcgccctcgtcccgactgatggttggacagctgtgtaagagcggc
actggtgcgttttccgtgtacagtaaggtgcaggccgcagcctag
DBGET
integrated database retrieval system
