Aedes aegypti (yellow fever mosquito): 5577915
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Entry
5577915 CDS
T01053
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aag03016
]
5577915
Enzymes [BR:
aag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
5577915
Transfer RNA biogenesis [BR:
aag03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
5577915
Prokaryotic type
tRNA splicing ligases
5577915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
5577915
NCBI-ProteinID:
XP_001656701
UniProt:
Q17FP1
LinkDB
All DBs
Position
2:400341340..400344022
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AA seq
506 aa
AA seq
DB search
MVVREYNEELKYIEKISPNSYLIKKGFQPNMNVEGIFYANSKLERLMFDELRNSCRPGMT
GGFLPGVKQIANVAALPGIVGRSVGLPDIHSGYGFAIGNMAAFDMSNPVSIVSPGGVGFD
INCGVRLLRTNLFEKDVKPVQEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSMRAKKRGLPQLGTLGAGNHYAEIQVVEEIYD
KFAASKMGIEELGQICVMIHSGSRGFGHQVATDALVEMEKAMKRDKIETNDRQLACARIN
SVEGQNYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFNTTPDDLDMHVIYDVSHNVAKME
EHMVDGRPKQLLVHRKGSTRALPPHHPLIPVDYQLTGQPVLIGGSMGTCSFVLTGTEKGM
AATFGSTCHGAGRSLSRAKSRRNLDYKDVLRDLEAKGIAIRVASPKLVQEEAPDSYKDVR
DVVQTCHDVGISAKAIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtccgcgagtacaacgaggagctgaagtacatcgagaagatttctccgaacagc
tacctcatcaaaaagggattccagccgaacatgaatgtggaaggaatcttctacgccaac
agcaagctggaacggttgatgttcgacgagctgcggaactcttgccggccggggatgacc
ggcggatttctaccgggagtcaagcagattgccaatgtggccgccctgcccggaattgtg
ggccggtcggtcgggctaccggacatccattcgggttatgggtttgccatcggaaacatg
gcagcgttcgacatgagcaatccggtgtcgatcgtttctccgggaggagtcggattcgat
atcaactgcggcgtccgactgttgcgtacgaatcttttcgaaaaggacgttaaaccggtc
caggaacagttggcccagagcttgttcgatcacattcccgttggcgtgggatcgaaggga
atcattccgatgaatgctcacgatctggaggaagcgctggagatgggcatggattggtct
ttgcgagagggttacgtttgggccgaagataaggaacactgcgaagagtacggaaggatg
ctgaacgctgatccgagcaaagtcagtatgcgggccaagaagcgaggtttaccacagttg
ggaacgttgggcgcaggaaatcactatgccgagatccaggtcgtggaggagatctacgac
aagtttgccgccagtaagatgggaattgaagagctgggccaaatttgtgtgatgattcac
tcgggaagtcgtggatttggtcatcaggtcgcaacggacgctttggtggagatggagaag
gccatgaagagagacaagattgagaccaacgatcgacagttggcatgtgcccgaatcaac
tctgttgaagggcaaaactacctcaaagctatggctgcggcggcaaacttcgcatgggta
aaccgtagttccatgacattcctgacccgtcaggcgtttgccaagcagttcaacaccact
cctgacgatttggatatgcatgtgatttacgacgtgtcgcacaacgtggccaagatggag
gaacacatggtagatggacgtcccaaacaactgctggttcatcgcaagggatcaactcga
gctctaccgcctcatcacccgttgattccagtcgattatcaactgaccggtcagcccgtt
ctgattggaggttcaatgggtacgtgcagctttgtcctgaccggtaccgagaaaggaatg
gccgcaactttcggatccacctgtcacggagcagggcgcagtttatctcgggccaagtcg
cgtcgtaatttggactacaaggatgtgctgagggatttggaagcgaagggaatcgccatt
cgcgttgcatcgccgaagctcgtacaggaagaagcaccggattcgtacaaggatgtaagg
gatgtggtgcagacttgtcatgatgtgggcatcagtgccaaagccatcaaattgagaccg
attgccgtaatcaagggataa
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