Aedes aegypti (yellow fever mosquito): 5578992
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Entry
5578992 CDS
T01053
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03008
Ribosome biogenesis in eukaryotes
aag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
5578992
09123 Folding, sorting and degradation
03018 RNA degradation
5578992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5578992
03019 Messenger RNA biogenesis [BR:
aag03019
]
5578992
03009 Ribosome biogenesis [BR:
aag03009
]
5578992
03016 Transfer RNA biogenesis [BR:
aag03016
]
5578992
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
5578992
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
5578992
Ribosome biogenesis [BR:
aag03009
]
Eukaryotic type
Pre-60S particles
RNases
5578992
Transfer RNA biogenesis [BR:
aag03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
5578992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
5578992
NCBI-ProteinID:
XP_021712980
LinkDB
All DBs
Position
1:complement(203577581..203637654)
Genome browser
AA seq
1007 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH
PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH
DRMNNNPGWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML
GLATHETHFTIIREEFLPNKERPCDICQIMGHEMKDCTGLQSERDINRTPPPPGAETQYI
FVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR
LVTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEIFRQRKVTEDRFKERNKRMK
LQKEREQRPNFEQMNKSQFAPTPLGRGITPQAIQNPRQEAAHFRMLGNSSNQQQSNTNND
QNRRGQKRKADEPLTPAAVEEAETPDEVRLWEDGFKDRYYESKFDVAPQNMKFRQTVAWE
YVRGLCWVLKYYYQGCASWEWYFPYHYAPFASDFKGLSNVNTHFDRGTPFKPLQQLMGVF
PAASRNHVPPAFAELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKAT
DPKVPSLTHEERLRNENGLARLYLSPGPDAYKLVKGLYNGSVDYEREVPILVDCMRGIVI
PTKENVTHDGVLPSPIPGLHPVCENKVLTVKFLDPQYADDFVYPARKLEGARDQPKVLGA
NEGPVIGFGQRTNRGGLGSAGHRMMNHYVGNNRGGGGGGGRGGGGGGGRNDYSNFSRGNN
SSNSSNFNSSSYTGNSMNTSSNNNYSNNSNSGSSDRGGSSSGANLSAFEQLSSRINQYQQ
QVMSEISRNASSSGMMLPNPFANQIPYDYNSRDRQNSGGYHNRGGFQQNQRGRNAGGNFG
GNQYGQRNQGGRFNNNFNNGGGGGGGGSRFGQNNSGGNRFNNNRRNY
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcattctttcgctggttgtcgcggaagtatccttcggtcattgttgag
tgcgtggagcaaaagcaaaccgatgaacacggaaatccgctgtatgatgatatgacccaa
ccgaacccgaacaaggtggagtttgacaacctgtatctggacatgaacggtatcattcat
ccttgtacgcatccggaagataaaccggccccgaaggatgaagacgagatgatggtggcc
atcttcgagtgcattgaccgtttgatgaatatcgtccgaccgcggaagctgctctacatg
gccatcgacggtgtggcaccacgagccaaaatgaaccaacagcggtcacgacgtttccga
gcctccaaggaagctgcggagaaagctgctgaggtgcagaagattcgtgacgagctgagg
gcgaagggatgtattctgcctccggaaaaggagaaaggggcccatttcgattccaattgt
atcactccgggaacgccattcatggacaggctgagcaaatgcctccagtactatgtacac
gatcgaatgaacaataacccgggttggaaggggctgaaaatcatcctttcggatgcaaat
gtccccggcgaaggcgagcacaaaattatggactacattaggaagcaaagggcgcaacca
gaccacgatccaaacactcatcacgttctctgtggggcggatgccgatctgatcatgttg
ggcttggccactcatgaaacccatttcaccatcatccgagaggagttcctgccaaacaag
gaacgtccttgtgacatttgccagataatggggcatgaaatgaaggattgcactgggctg
caatcggagcgggacattaatcggacgccacctccccctggggcagagacgcagtacatt
ttcgtccgtttgaatgtacttaaggagtacctcgccaaggaactggacatgcccaatcta
ccgttcaagtatgactttgaacgcgtaattgacgattgggtgtttatgtgcttcttcgta
ggaaacgatttcctaccgcatttgcctagtttggagattcgtgaaaatgccatcgatcgg
ctggttacgttgtacaagaagtgtgtgtacaagaccaagggttaccttacggattccgga
agcgtaacggttgatcgtgtcgaactcattatgacggatcttggctatgcagaggacgag
attttccgccaacggaaagtcaccgaggatcgtttcaaagagcgcaacaaacgcatgaaa
ctgcagaaggagcgagaacaacgtcccaattttgagcaaatgaacaaatcccagtttgct
ccgactcccttgggacggggaatcactccccaggcgattcagaatccacgtcaagaagct
gcgcacttccggatgcttggcaatagcagcaatcaacagcagagcaataccaacaacgat
cagaaccgacgcggtcagaaacgtaaggcggatgaacccctcactcctgcagccgtcgaa
gaagcagaaacccccgatgaggttcgtttgtgggaagatggtttcaaggatcgctattac
gagtccaaattcgatgttgcaccacaaaacatgaagttccgtcaaactgtagcatgggaa
tacgtccgtggcctatgctgggtacttaaatactattaccagggctgtgccagttgggaa
tggtatttcccgtatcattacgccccttttgcgtccgacttcaaggggctcagcaacgtt
aacactcatttcgatcggggcactccgttcaaaccgttgcagcagctgatgggcgtgttt
cccgcggccagtagaaatcacgtcccaccggcgttcgccgagctgatggtggatcccaaa
tcgccgatcatcgatttttatccgatcgatttccacatcgatttgaacgggaagaagttt
gcctggcagggcgtggccctgttgccgttcgtcgacgagaagcgcttgttcaaggctacc
gacccgaaggtcccgtcgctgacgcacgaagaacggttacgtaacgaaaacggcctggct
cgcttgtacctgtcgcccggaccagacgcgtacaaattggtcaaaggtttgtataatggc
tcagtggactacgagcgcgaggttccgattctggttgactgcatgcgtggtatcgtaatt
ccgaccaaggaaaacgtcacgcacgatggggtgcttccatcgcccattcccggcctgcat
ccggtgtgcgagaacaaagttctgacggtgaaattcctcgacccacagtacgcggatgat
ttcgtgtacccggcccggaagctggagggagcccgggatcagcccaaggtcctgggagcg
aacgagggtccggtgatcgggtttggacagcgaacgaaccgaggcggactgggtagcgct
ggccaccggatgatgaaccattacgttggtaacaatagaggaggaggaggtggcggcgga
agaggaggaggcggaggcggtggacgcaatgattacagcaatttttcgagaggtaataat
tcatcaaatagcagcaacttcaactcgtcatcttacacaggcaacagtatgaatacgtca
tcaaacaataactattcgaacaattcgaattctggatcgagcgaccgcggtggttccagc
tccggagccaacttgagcgccttcgagcaactgagcagccgtatcaatcagtaccagcag
caggtgatgagtgagatctctcggaacgctagcagttcaggaatgatgctgccaaatccg
ttcgccaatcagattccttatgactataacagcagggatcggcaaaacagtggtggatat
cacaaccgcggaggcttccagcagaatcaacggggcagaaacgctggaggcaatttcggt
ggcaatcagtacgggcagcgcaatcaaggtggccgattcaacaacaacttcaacaatgga
ggcggaggcggtggaggtggaagccgcttcgggcagaacaattctggtggcaatcggttc
aacaacaaccggagaaactactaa
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integrated database retrieval system
