Aedes aegypti (yellow fever mosquito): 5580150
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Entry
5580150 CDS
T01053
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5580150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5580150
03019 Messenger RNA biogenesis [BR:
aag03019
]
5580150
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
5580150
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
5580150
U7-dependent histone pre-mRNA processing factors
5580150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_GCN1
HEAT_2
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
5580150
NCBI-ProteinID:
XP_021704446
LinkDB
All DBs
Position
3:complement(127453978..127480002)
Genome browser
AA seq
1172 aa
AA seq
DB search
MDFFRSSSFSQETASLFMDEKTASARMKIIEALNESLTANTTQKCEIIAKVQELIIHSDT
DLMLEFLDNILAFAHDSNQEVRKSVAGFIEDVCKTNISHLPKVVHILFALLRDTAPSVTK
RVIQGCGAIYKQALQWICSLSDITEEVEQAWNTLCLIKASILDMIDNDNDGIRTNAIKFL
EGVVILQTYPDEDSMKRENDFSLENIPLTLKIARRRKLEDEAGHIFELLLQFHAASYISL
VNLIACTGTLCIIAKMRPSMMNQVVEALSNLHSNLPPTLSNSQVSSVRKKLKMEFLNLLK
HPACYEHQTAIVQILQDLGASNSEIGRAIPKLDKREQQRRAKRARESSMTSQLAAKKAKL
GEHMRREKERSAAAAAAVSSEPRQMEIDYDELNEQKARSNVLNEQFLADNLKKLEVVTQL
VLNNLTKVPPEVPQQFLQSYTPMPLSTTVPQQIQKIAQVFAQQMTDVRVGPGSSAMTKEP
PMRPKISDDEERSIIQGRRRDLDAESLADDEVDLDDVELDKLPEEERKRAENTRKLRETL
ERVKGGEPKLKQRVKAFGLQDITKPQPNNLKHKFLLDAVRRILKAEKQALIGGAAFKRRR
IITVFGSCFMPSVRDVILEFIYEDVKKRMDLAFSWIFEEYSLLQGYTRHTYIKSEMKPDF
PYTQLVLNLLTNIMERQDLREKESLLKSIYLEAPLIPDEVISLLNHMCQLEELADCGMQI
TKDLLIRRPPKEKVYLDILFKYSVYENCIIREKAIHYLLHIYSTHRIMTDEMEKRALQWL
GYLELENPPEEVFAFELGRAELPRMWTDELAKTCLGLFLEILVYNQEMIHRLSDVYTKAT
SDMKRAMLRAIEAPVRKIGAESEELLKLIENCPKGSETIITRIIYILTEKSIPTQELVNR
VRNLHQTKVSDVRLLIPVINGLTKKEILSALPKLIKLNPVVVKEVFNRLLGVGAEYSSSN
LPITPAELLVALHTMDTSKVELKWVVKATSLCLAEKETYTHDVLGSVILQLVEITPLPTL
LMRTVIQSLTLHPRLAGFVTNLLQRLIMKQVWKQKVVWDGFLKCAQRLTPQSLGILIQLP
APQLQDALNICPEFREPMLEHAREIMEHQIGHVSQDRMDVLLGISQHTPAERTELQVVAN
FNEEVPTATHMPVIIKQEKDVERPEPAPPGMD
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttccgtagctccagcttcagccaggaaacggcttcgctctttatggacgaa
aagactgcttccgcccgcatgaagatcatcgaagcgctgaacgaatccctgactgcgaat
acaacccagaagtgtgaaatcattgccaaggtgcaggaactgattatccactcggatacg
gacctgatgctggagttcttggataacattcttgcttttgcccatgattccaaccaggag
gttcgaaaatcggtggccggatttatcgaggacgtttgcaagacgaacattagccatctt
ccgaaagtggttcatatattgtttgccctgctccgagacacggccccgagtgtaacgaaa
cgagttattcaagggtgtggggcgatctacaagcaagcattgcaatggatttgttccctg
tcggatattacggaggaagtggaacaagcctggaatacattatgcctgatcaaggcgtcg
attttggacatgatagacaacgataacgacggaattcggacaaatgccatcaaatttttg
gaaggagttgtgatcctccagacctatccggacgaagacagtatgaagcgggagaacgac
ttctcgttggagaatattccgttgacgctgaagattgctcggcgacgaaaactggaagac
gaagctggtcacatttttgagttgctcctccagttccatgcagcttcctacatttctctg
gtgaatctgattgcttgtacgggtacactctgcatcatagcaaagatgcgtccctccatg
atgaatcaagtggtggaagccctatcgaatcttcactctaacttgccaccaaccctttcg
aattctcaggttagctctgtgcgtaagaaattaaaaatggagttcctgaacctcctgaag
cacccagcttgttacgaacatcaaaccgccatcgtccagatacttcaggacctgggcgcc
tcgaacagcgaaattggccgagcaattcccaagctggacaaacgcgaacagcaacgtcgg
gccaaaagagcgcgcgaaagctccatgacgtcccaactggcagctaagaaagctaaactt
ggcgaacacatgcgccgcgagaaggaaagatcggcagccgctgccgcagcagtctcctcg
gaaccacgccaaatggaaatcgactacgatgaactaaatgaacagaaggctaggtcaaac
gttctgaacgaacaattcctggccgataatcttaagaaactagaagtcgtcacacagctg
gtgctgaataatctgaccaaagtgccaccggaagtgccgcagcagtttttgcaaagttac
actccgatgccactaagcacgactgttccgcaacagattcagaaaattgcgcaggtgttc
gctcaacagatgaccgatgtgcgcgttggtccggggtcatctgccatgaccaaggaaccc
cccatgagaccgaagatcagtgacgacgaggagagaagtattatccagggtcgtcgtcga
gacttggatgcagaaagcttagccgatgatgaagtcgatctggatgacgtcgagctagat
aagcttcccgaagaagaacgaaagcgtgcagaaaacactagaaaacttcgtgaaacgctg
gaacgtgtcaagggcggtgaaccaaaactgaaacaaagagttaaagcttttggtctgcag
gatataacgaagccacaaccaaacaatttgaaacacaagttcctgctcgatgctgtaagg
agaatattgaaggcggagaagcaagctctcattggaggagccgctttcaaacgtaggcgt
attataaccgtgttcggttcttgttttatgccatcggtgcgggacgtgattctggagttc
atctacgaagacgtcaagaagcgtatggatttggctttctcgtggatattcgaagagtac
agtcttctacagggctacactcgacatacctacatcaagtcggaaatgaaaccagatttt
ccttacacccagttggtgttgaatctgttaaccaacattatggaacgacaggatttgcgc
gaaaaagaatccttactgaaaagcatctatctggaagcacctttgattccggatgaagtg
attagtttgttgaatcacatgtgtcagctcgaagaactggcagactgcggtatgcagata
acaaaagatttactcatcagaagaccaccgaaagaaaaagtttatctagatattctcttc
aaatattccgtctacgaaaattgcatcattcgcgaaaaagctatccactatttattgcac
atttattcaacgcatcgtataatgaccgatgaaatggagaagcgagcattgcagtggctt
ggatacctggaactagaaaatccaccagaagaagtgttcgcctttgagctgggtcgcgcg
gaattgccaagaatgtggaccgatgagttagccaaaacttgtttgggtctgtttttggaa
attctagtctacaatcaggagatgattcacagactgtcggacgtttataccaaggctaca
tccgacatgaagcgcgcaatgttgagagccatcgaggcgccggtgcgcaaaattggcgcc
gagagcgaagagcttcttaagcttatcgagaattgcccgaagggctccgaaaccatcatt
actagaatcatttatattttaacggaaaaatccattccaacacaggaactcgtaaaccga
gtccggaatttgcatcaaaccaaagtgtctgatgttcgtctactgatccccgttataaac
ggtcttaccaagaaggaaattttgtccgctttaccgaaacttatcaaactgaatccggtc
gttgttaaagaagtgttcaatcgattactaggcgtgggagctgagtacagtagttcaaat
ctgccgattactccggcggaactgcttgtggcccttcataccatggacaccagcaaagtc
gagctgaaatgggtagtgaaagccacatcactttgcttggcagaaaaggaaacttacaca
cacgacgttctcggtagcgtaattctccaattggtggaaatcacacctctaccaacgctc
ctgatgcgaaccgttattcaatctctgacgcttcacccgaggttggccgggtttgtgacc
aacttgttgcagcgtctcataatgaaacaagtctggaagcaaaaggttgtctgggatggt
ttcctcaagtgtgcccaacggttgacaccgcaaagtttgggaatcttgattcagctgcca
gctccccagctgcaagatgcgctgaacatttgtcctgagttccgggaaccgatgttggaa
catgcccgtgagatcatggagcatcagattggtcacgtctcgcaagatcgcatggacgtt
ttgttaggtatttcgcagcatacacctgccgagaggacagaacttcaggtcgttgctaac
ttcaacgaagaagttccgacggctacccatatgcctgtgataatcaaacaggaaaaggat
gtggaacgtccggagccagctccacctggtatggattaa
DBGET
integrated database retrieval system
