Aricia agestis (brown argus): 121725573
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Entry
121725573 CDS
T09904
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121725573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aage03041
]
121725573
03009 Ribosome biogenesis [BR:
aage03009
]
121725573
Enzymes [BR:
aage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121725573
Spliceosome [BR:
aage03041
]
Complex A
U2 snRNP components
U2 related factors
121725573
Complex B
121725573
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121725573
Ribosome biogenesis [BR:
aage03009
]
Eukaryotic type
90S particles
Helicases
121725573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
Cas3-like_C_2
ABC_tran
T2SSE
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
121725573
NCBI-ProteinID:
XP_041968523
LinkDB
All DBs
Position
3
Genome browser
AA seq
734 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREERAAALAKSGGSSESSEAVATVSSSASTTTSTPGINPYTGLP
HSQRYHELLRRRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAISA
GKSCGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTLLKYMTDGMLL
REAMSDPMLEHYKVILLDEAHERTLATDILMGVLKEVIKQRPDLKLVIMSATLDAGKFQQ
YFDNAPLMNVPGRTHPVEIFYTPQPEKDYLEAAIRTVIQIHLCEKISGDILLFLTGQEEI
EDACKRIKREIDNLGPEVGELKCIPLYSTLPPNLQQRIFEPPPPNRSEEAIGRKVVVSTN
IAETSLTIDGVVFVIDTGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCF
RLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALEL
LNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQVFVR
PNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQSMEDPHWCYDNFINYRSLKSGDNVRE
QLSRIMDRFSLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQLH
PSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQLEL
LQARLESKAYQEGF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgaagaattgaagttatggatccttttataaaaaagaagagggaggagagg
gctgctgctttagcaaaatctggaggcagtagtgagtcgtcagaagcagtggctactgtt
agctccagcgcatcaaccacaaccagtacgcctggaatcaacccttatacaggtttaccc
cactcacaacgctatcatgaacttttgcgtcgccgacttggacttccagtttgggagtat
aaaaatgatttcatgagactactcaacactcaccaatgtattgtactcgttggtgaaaca
gggtccggtaaaaccacacaaataccccaatggagtgtggaatttgctgcaatctcagct
ggaaaatcatgtggagtagcatgcacacagcctagaagagtggctgctatgtcagtagca
caaagagttgcagaggagatggatgttgcactcggccagcaagttgggtacagtatacgt
tttgaagattgttctggaccccaaacccttctgaagtatatgacagatggtatgttgttg
cgtgaggccatgtctgatcccatgttggagcactataaagtaattcttctcgatgaagcc
cacgaaaggacattagccactgatatattgatgggagtactgaaagaagttatcaagcag
cggccagatttaaagttggttattatgtctgctactttggatgctggaaaattccaacag
tattttgataatgctccgttaatgaatgtacctggacgtacacatcctgttgaaatattt
tacactccacaacctgagaaagactacctggaagctgcaattcgtactgtgatacaaata
catctctgtgagaaaatatctggcgatattcttttatttttgacgggacaggaggagatc
gaggacgcttgcaaacgaataaaacgtgaaattgataatttgggaccagaagttggagag
ttaaaatgcattccactgtattcgactttgcctccaaacttgcaacagagaatttttgag
ccacccccaccgaatcgatccgaggaagcgatcggtagaaaagttgtagtttccacaaat
atagctgaaacttccttgactattgatggagtagttttcgtgatcgacactgggttctcg
aagcagaaggtgtacaacccgagggttcgtgtggagtccctgttggtgtctcccatcagt
aaggcatcggcgcagcagagagcgggccgtgccgggcgaactcgccctgggaagtgcttt
agattgtacacagagaaggcgtacaaaacggaaatgcaagacaacacttaccctgagatt
ttgagatcaaacttaggatctgtagttttgcagttgaaaaagctggggatcgacgatttg
gtgcattttgacttcatggacccaccagctccggagacattgatgagagctttggaattg
ctcaactatcttgctgctcttgatgacgatggcaacttgactgacctcggggccgtgatg
gcggagttcccgttggacccgcaactcgcgaagatgctgatagccagctgcaaccacaac
tgttccaatgagatactctccatcaccgctatgttgtcagttccccaagtgtttgttcga
cccaacgaagcacgcaaagcggctgacgaagctaagatgcgcttcgcccacatcgacgga
gaccatctcaccttactcaacgtttaccatgcgtttaaacaaagcatggaagaccctcac
tggtgctatgacaatttcatcaactacagatctctcaagtccggtgataatgtaagggaa
cagctgagtagaattatggataggtttagcctcaagagaacaagtactgagttcacaagt
aaagactactacattaacattagaaaagcgcttgtcaacggtttcttcatgcaggtcgct
cacttggagcgtactggccactacttgacggtgaaggacaatcaggttgtccagcttcat
ccgtcgacctgcctcgaccacaagcccgactgggtcatctacaacgagtttgtactcacc
accaagaactatatacgtacagtgaccgacatcaaaccggaatggctattgaaaatagcg
ccgcagtactacgagttaaacaacttcccgcagtgcgaggctcgtcgacagctcgagctg
ctgcaagctcggctcgagtccaaggcgtaccaggagggcttctaa
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integrated database retrieval system
