Aricia agestis (brown argus): 121726296
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Entry
121726296 CDS
T09904
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03015
mRNA surveillance pathway
aage03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121726296
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121726296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aage03019
]
121726296
Messenger RNA biogenesis [BR:
aage03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
121726296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
121726296
NCBI-ProteinID:
XP_041969519
LinkDB
All DBs
Position
4:complement(7036050..7050907)
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AA seq
706 aa
AA seq
DB search
MADGGVDIDLYADDIESDFNRQDDFGGDNVDLYDDVIAAPSVKPEDGDGPPNSQQHPHPP
EETNGNAPYHHGPSHGHHGRRFQLYVGNLTWWATDQDIANAIADIGVSDFQDVKFFENRA
NGQSKGFCVISLGSDQSIRMVMDRLPKKEIQGQHPVVTLPTKQALNQFESQSKTRSTPPG
PNNPGMRGGHPGGPPGPHPGEFFGGGPNGPGPNGPRMMMPGPGPHHQMRGPPPGHPGHGP
PPHHMQQHQGPPPHHMPPHQGPPPHQGPPQHRPPMQQLNFQFQGPPQMQRPGPGGPGGPG
GPRGGEWAARGPPHMQAAPAPQYGPPQHQMPHPMPPPHAGPGQGMPPPHHQMPPHQQGPP
QRPGPMPQHPGIVATRSPDGVGPGAPAPHVNPAFFNQQPPVQPAPGVQPPPQAVPPGPGG
PYGHPAHGGPPPAQGPPPGARQPYGRPPQSYGGAEPRPLPHAHAPIAHHMPAISEAEFEE
VMGRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSKVAHDDRCKILISSLQDT
LHGVETKSYGGERRRSRSRERDARTHHRAPRRRERSASRYRDRSRDREERDRYRERSRDR
DRERERDAYYRDYRERERDRSRSRDRERADHYNRGHSREERSVRARKSPVEAVADAGAAD
PTVAKRASAAPYYDERYRERRDRDTAAGDRDRDRDRDRDHRRDARH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggcgtggatatagatttatacgccgatgatatagaatctgatttcaat
agacaggatgatttcggaggtgacaacgtagatttgtatgacgacgtgattgcggcacca
tcagtgaagcctgaggatggagacggacccccgaactctcaacagcatccacatcccccg
gaggagaccaacggcaacgcaccgtatcatcacggaccaagccacggacatcatggccgc
cgctttcaactttacgtcggaaatttaacctggtgggccacagatcaagacatcgcaaac
gcgatcgccgacattggcgtgtcggatttccaagatgtcaagttctttgagaacagagcc
aacggacaatcgaagggcttctgcgttatatcgctgggctccgatcagtccattagaatg
gtcatggatcgccttcctaaaaaggaaatccaaggccaacaccccgtagtaacgttgcca
actaagcaggcgttgaaccaatttgagagccagtctaagacgaggtctacgccacctgga
cccaataaccccggaatgagaggaggtcacccaggcgggccacccggcccgcatccagga
gaattctttggtggtggaccaaacgggcccgggccgaacgggccccgtatgatgatgccg
gggccggggcctcaccaccagatgcgcgggcctccgccggggcacccggggcacggccca
ccgccacaccacatgcagcagcaccagggccccccgccgcaccatatgcccccgcatcag
gggcctccaccccaccaggggcctccacagcatagaccaccaatgcagcaattaaatttc
cagttccaaggcccgccgcagatgcagcggccggggcccggtgggccgggcggcccgggt
ggccctcggggcggcgagtgggccgcgcgtggccccccgcacatgcaggcagcgcccgcg
ccgcagtacggccccccgcagcaccagatgccacatcccatgccgccgccgcatgcaggt
ccaggccaaggcatgccaccaccacaccaccaaatgcctccgcaccagcaggggccgcct
cagaggcccggccccatgccccagcatccaggaatagtcgctaccaggtctcctgatggc
gtaggaccgggtgcgccggcgccgcacgtgaacccggcgttcttcaaccagcagccgcca
gtgcagcccgcgccaggcgtgcagccgccgccgcaggctgtgccgccaggtccgggcggt
ccatatggccacccggctcacggcggcccgccgcccgcgcagggaccgccccccggcgct
agacaaccctacggacgaccaccacagagctacggtggtgcggagccacgccccttgccg
cacgcgcacgcgccgatcgcccaccacatgcccgcgatcagcgaggcggagttcgaggag
gtgatgggccgcaaccgcaccgtgtcgtcgagcgccatcgcccgcgcggtcagcgacgcc
gccgccggagagtacgcgtccgccatagaaacgctagttaccgccatctcgctcattaaa
cagagcaaggttgcccacgacgacagatgtaagatactgatatcatcactccaagacact
ctacacggtgttgagacgaagtcgtacggcggtgagcggcggcgctcgcgatctcgagag
cgggacgctcgcacgcatcaccgtgcgccgcgacgccgcgagcggtccgcgtccagatac
cgcgacagatcgcgcgacagggaggagcgggaccgatacagggaaaggtcgagagatcgc
gaccgtgagcgcgagcgtgatgcttactacagagattaccgcgagcgtgagagggacagg
tcgaggtcgagggaccgtgaacgtgccgatcactacaacagaggacacagtcgggaggaa
aggtcagtaagagcacgcaaatcaccagtggaggcggtagccgacgcgggtgcggcggac
cccaccgtcgctaagagggcgagcgcagcgccgtactacgacgagcggtaccgcgagcgg
cgcgaccgcgacaccgccgccggcgaccgcgaccgcgaccgcgacagggaccgcgaccac
cgccgagacgctagacactag
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