Aricia agestis (brown argus): 121727002
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Entry
121727002 CDS
T09904
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121727002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aage03019
]
121727002
03041 Spliceosome [BR:
aage03041
]
121727002
Messenger RNA biogenesis [BR:
aage03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121727002
Spliceosome [BR:
aage03041
]
Complex B
Other components
Prp19-related factors
121727002
Complex C
121727002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_15
TPR_10
NRDE-2
Mad3_BUB1_I
ARM_TT21
DHR-2_Lobe_A
PPR
ARM_TT21_C
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
121727002
NCBI-ProteinID:
XP_041970606
LinkDB
All DBs
Position
1:14737352..14740716
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AA seq
838 aa
AA seq
DB search
MPLLDGKEIDIFFSEEDLPYEEEILRNPFSVKHWLRYIEHKKGAAKNEINIIYERALKEL
PGSFKLWYNYLKLRRSQIRGKCITDPVYEDVNNCFERSLVFMHKMPRIWMDYCTFLTDQY
KVTVTRKAFDSALRALPITQHHRIWPLYLKFLKKHNIPETAVRVFRRYLKLCPEDTEEYI
DYLISIEKLDEAALKLAQLVNNENFQSKHGKSNHQLWNELCELISKNPDKIHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVAKKVNPSEDDDVDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR
VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLYTLWVGFAKFYENNDQIDDARVIFEKATQ
VNYAKVDDLASVWCEWAEMEIRHENYEEALKLMQKATVLPSRKVAYHDDEETVQMRLYKS
LKVWSMYADLEESFGTYKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGTKLERARDLFEQCLEHCPPEFAKAIFLLYAKLE
EEHGLARHAMSVYERATTAVLPEQMFEMFNIYIKKAAEIYGVPKTRQIYEKAIETLTDEK
SREMCIRFAEMETKLGEIDRARAIYAHCSQMCDPRITGEFWNTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTISDLAPGMKDGMRMLEAKAAEMAVQSKG
NILFVRGETQGLKESDKVVNPDEIDIDEDENSGDDEDEPVQKKEIPAAVFGGLVPDKE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttctggatggaaaagaaattgacatattctttagtgaagaagatttgccgtat
gaagaagaaatattaagaaatccattttcagttaaacattggcttagatatattgaacac
aaaaagggggctgctaaaaacgaaataaatataatttatgaaagagctctcaaagaatta
ccagggtcttttaaactatggtataattatttaaagctgagaaggtcacaaataagaggc
aaatgtataactgatcctgtatatgaagatgtcaataactgctttgaaaggtctttagtg
tttatgcacaaaatgcctagaatttggatggattattgtacttttttaacagatcaatat
aaggtcacagttacgagaaaagcatttgatagtgcattaagggcactacctataactcag
catcatagaatttggcctctttatcttaagtttctcaagaaacataatataccagaaact
gctgtaagagtttttcgaaggtacttaaagttgtgtccagaagatacagaggagtatatt
gattatttgatttcaattgaaaagttagatgaagcagctttaaagctagcccaacttgtg
aataatgaaaattttcaatccaagcatggaaaatctaaccatcagctgtggaatgagtta
tgcgagctgatatcaaagaatccagataaaatacattctttaaatgtagatgcaattata
aggggtggcttacggagatatactgatcaattaggtcatctttggaattctcttgcagat
tattatgtacggagtggcctttttgagagagcaagagatatttatgaggaagctatacaa
actgtaacaacagttagagattttacacaggtgtttgatgcttatgcacaatttgaagag
ttaagcttaagcaaaaagatggaggaagttgccaaaaaggttaatccttctgaagacgat
gatgttgatttagaattaagattagcaagattcgaatatctaatggagagaagactccta
cttcttaactcagttttgttgagacaaaaccctcataatgtagcagaatggcacaaaaga
gtaaagctatatgaaggaaaacctcatgaaatcatagacacctatactgaagcagtacaa
actgtagatcctaagctagctgtgggcaaactgtatacattatgggttgggtttgctaaa
ttttatgaaaacaatgaccaaatagacgatgctagagttatatttgaaaaggctactcaa
gtaaattatgctaaagtagatgacttggcatctgtttggtgtgaatgggctgaaatggaa
atacgccatgaaaactatgaagaagctcttaaattaatgcagaaagctacagttttacct
agtcggaaggttgcttaccatgatgatgaagaaactgtgcaaatgcgtttgtataaatct
ttaaaagtatggtccatgtatgctgacttagaagagagttttgggacctataaatcttgt
aaggctgtttacgatcatattattgatttaaaaattgccactccccaaattataataaat
tatggtttatttttagaggaacataactattttgaggaagcttttagagcttacgaaaaa
ggtatagctctcttcaaatggccaaatgtctatgatatatggaacacatatttaacaaag
tttttgaaaagatatggtgggacaaaattggaaagagccagagatctttttgaacaatgc
ttggaacactgtccacctgagtttgctaaagccatttttcttctttatgctaaattagaa
gaagaacatggcttggctagacatgcaatgtctgtatatgagcgtgcaaccacagcagtg
cttcctgaacaaatgtttgaaatgtttaatatttacattaaaaaagctgcagaaatatat
ggtgtacctaaaactaggcaaatatatgagaaagcaatagaaactcttacagatgagaaa
tcacgagaaatgtgtataagatttgctgaaatggaaacaaaactaggtgaaattgataga
gctcgtgcaatttatgcccattgtagtcaaatgtgtgacccaagaattactggagaattc
tggaacacttggaaagagtttgaagtacgacatggaaatgaggatacaatgcgtgaaatg
ctaagaataaagagaagtgtgcaggccacatataacactcaagtgaatatgatgtctgca
caaatgcttagttctgcagcacaagctgcaggtactatttctgatcttgcaccaggcatg
aaagatgggatgagaatgctagaagcaaaggcggcagaaatggctgtgcaaagtaaaggt
aacatattatttgtcagaggggaaacccaaggactcaaggagagtgacaaagtggttaat
cctgatgaaattgacattgatgaagatgaaaacagtggagatgatgaagatgaaccagtt
cagaaaaaagaaatccctgctgctgtttttggagggctggtaccagataaagaataa
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