Aricia agestis (brown argus): 121728188
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Entry
121728188 CDS
T09904
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03013
Nucleocytoplasmic transport
aage03015
mRNA surveillance pathway
aage03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121728188
09122 Translation
03013 Nucleocytoplasmic transport
121728188
03015 mRNA surveillance pathway
121728188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aage03019
]
121728188
03041 Spliceosome [BR:
aage03041
]
121728188
Enzymes [BR:
aage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121728188
Messenger RNA biogenesis [BR:
aage03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121728188
Spliceosome [BR:
aage03041
]
Complex C
Other components
EJC/TREX
121728188
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121728188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121728188
NCBI-ProteinID:
XP_041972258
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All DBs
Position
6:20301397..20302947
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATDAPQKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEEVLKMACPHIVVGTPGRILALVNN
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgacgatcttctcgattacgaagatgaggagcaggcagatcaacagacc
gccgacggagcgaccgacgcgccgcagaaaaaagaggttaaaggatcctatgtatctatc
cacagctcaggatttagagatttcctgctaaaacctgaaatattaagagccatagtcgat
tgtggtttcgagcatccctcggaagttcaacatgagtgtataccccaggccgttctcgga
atggatattctgtgccaagcgaaatctggtatgggtaaaacggccgttttcgtactggct
acgctgcagcagctggagccctccgagaatcacgtctacgtcctagtcatgtgccacacg
agagagctggctttccaaatcagcaaagagtacgagcgattctcaaagtacatggccggc
gtccgagtgtccgtgttcttcggcgggatgccgatacagaaggacgaggaggtgctgaag
atggcctgcccgcacatcgtggtcggcaccccgggccgcatcctggccctagtcaacaac
aagaagctaaatctcaaacacttgaagcacttcatcctcgacgagtgcgacaagatgctg
gagtcgctggatatgcggcgcgacgtgcaggagatattccgaaacacgccgcacggtaag
caggtgatgatgttctccgccacactcagcaaggagatccggcccgtctgcaagaagttc
atgcaggaccccatggaggtgtatgtggacgacgaggccaagctcaccctgcatggcctc
cagcagcactacgtcaagctcaaggagaacgagaagaacaagaagctgttcgagctcctg
gacgtcttggagttcaaccaggtggtgatcttcgtcaagtccgtgcagagatgtatagcc
ctagcgcagctcctcaccgatcagaacttccccgccattggaattcataggaatatgacc
caggacgagcgtctctcccgttaccagcagttcaaagattttcagaagagaatacttgta
gctaccaacctgttcggaagaggaatggatatcgagcgagtgaatattgttttcaactat
gacatgccagaggactccgatacgtacttgcatcgggtggctcgagcgggaagattcggt
accaaagggctggccatcactatggtgtcggacgagaacgatgccaagatcctgaatgaa
gtacaagaccgatttgatgttaacattacagagctcccggaagaaatagaattgtccacg
tacattgaaggacgatag
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