Aricia agestis (brown argus): 121729265
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Entry
121729265 CDS
T09904
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aage
Aricia agestis (brown argus)
Pathway
aage04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121729265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aage00536
]
121729265
Glycosaminoglycan binding proteins [BR:
aage00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121729265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
121729265
NCBI-ProteinID:
XP_041973658
LinkDB
All DBs
Position
8:13017195..13065828
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AA seq
1830 aa
AA seq
DB search
MAWLKGLFLLLFFANGHGQDQLEVFDVLSVVRDGELPEGISRVPGRCQPPDLMEGQSALS
LNENATLHQLAAGMFYNTFPEDFSILTVVRPGTDQNPLFVLYSDAGDEQLQLVVGELVEL
YYEDTRGDPDDHEMLTFRVNVTDDRWHRIAVSVKGDSVTLLVDCEVKGSLPLRRRPGSTF
NLAGVLVVGTQVTPDQYYEGDIELLQFANKPDLAYDMCITVAPDCIGYGSNTAEGTGEHG
SYQTTEAIRESYGYEETTEAARESYGSYQSTEANREPYNANIGIVITRTESPFRNRNRNK
FRTGSNDYRQQTLRRNESPNRIDSNEYRRGGLVNRNRPPGRIESNYDSIHRESGLYRNQP
PITIESNTGNRFNEVNESSSWANRAATERPYWQVAENYGFTDSDENSIFGRFTDNDEVLS
TLSNVEVTSTTPALTTTMRGTEEESVFTTESSYTPVTTEDSDWLTHPPEYDGNTSIYDNT
DTYYDYGSGTYMGPRGYPGPPGQPGPRGPKGDPGKPGLEGQQGFPGPPGHVFVVPLTQAG
NEKGPDAQSEALRQILTQHMAAMRGAEGPMGLTGPPGPEGDTGPEGPKGEQGDQGEPGPP
GLRGLQGPPGRLGRRGHAGRDGERGFPGPPGAKGEQGYPGQMGLPGDKGERGTPGQSGEV
GAPGQDGPPGDDGPPGPPGLAGELGPRGFMGPRGYPGLIGYPGIPGNEGPQGAKGAAGQP
GPPGAMGQPGPMGPPGSAGPQGPTGAPGIQGTQGKPGMSGLPGPEGSPGTPGNPGQQGSP
GDAGPPGPQGMLGFPGGRGPKGEEGPRGQPGDKGDKGVRGIEGEKGEMGSKGERGLPGEP
GPPGIEGPEGQKGIEGPRGETGSIGPSGEKGATGPQGPQGYPGSQGEKGDKGAYGRRGRR
GMKGVAGPIGNPGDRGESGPRGYRGPRGRRGSDGPPGPKGDTGQPGPPGSIGERGPQGLE
GPRGFPGSTGPPGADGKAGLPGPPGERGPTGETGAPGLSGPPGPAGPQGPNGEPGPAGPQ
GPSGIPGTPGEGGAPGEMGKAGPPGLPGPEGKAGPVGSPGPQGNNGEAGLPGVPGTPGQK
GDMGPTGPAGVRGDKGEQGEPGREGPQGPIGRDGPRGSPGPGGQKGEIGEPGPIGPVGRD
GLPGPRGLTGAPGPVGPPGEDGDKGDAGPPGEKGFKGSMGEPGPTGAPGIQGLRGEPGPV
GLPGDKGPQGDPGPPGIPGSDGVRGPPGPIGKTGPEGSKGEQGGKGDRGVVGPKGPPGPA
GLTGPPGMRGAKGNQGEPGPRGPQGDAGAIGNPGAPGPIGPQGPEGKMGPRGLTGPKGDD
GSPGQQGEPGIIGPKGPEGPKGDPGPAGFPGDRGESGPQGIKGEPGLDGPEGSVGPPGPP
GPAGPIGKPGETGLPGTPGTEGAAGAQGSPGSPGEKGDTGPKGAPGEPGHVGPAGPPGPE
GQRGVRGIPGPTGDVGAPGMVGPEGPSGATGPPGGQGPKGDKGSRGPKGHIGDTGPMGIK
GDQGEPGKQGLPGPQGPIGPKGEMGPIGPTGPKGDPGPVGAPGPEGPLGPKGSDGQDGRP
GPPGPAGPAGPPGPPAPPPQIPMEFFTSSRRRRSVQTDSFEATTDDDLDEEEDLDWVGEV
MSGVVAARGALELARRPRGSATSPALSCRDLAHSHHNLTDGLYWIDARGASSRPMQVYCM
GQSTCVYPTNIEEDVYSEKSGQKFSKLENGYKIMYDSDGAGGVQLRFLRLLSTVARQNFT
YVCENTKMAQRSDIPADLSRVNKIKLFGQNSVEFKEPQVIKDTCKDGVGEIVLEVRTSRS
ERLPITDFQPLTFVDAEHRFSFKPGPICFT
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggcttggctaaaaggacttttcctcctactgtttttcgccaacggacacggtcaagac
caattggaagtattcgacgtgctgtccgtggtgcgggatggggagctgcccgagggtatc
tcccgtgtccccgggcgatgccagccgcccgatctcatggagggacagtcagcactgtcc
ctgaacgagaacgccacgctgcaccagctggccgccggcatgttctacaacaccttccca
gaggacttctcgatactgaccgttgtgagacctggtactgaccagaacccactattcgtt
ctgtactctgacgccggcgacgagcagctacagctggtggtgggagagctggtggagctg
tactacgaagatacgcgcggcgaccccgacgaccacgagatgctgaccttccgcgtcaac
gtcaccgacgacagatggcaccgaatagctgtcagcgtgaagggtgactcggtgaccctg
cttgtggactgcgaggtgaaagggtcactgccgctgcggcgccgccccggtagcaccttc
aacctggccggagtcctggtcgtgggcacgcaggttacgccagaccagtactatgaggga
gatattgagctgctccagttcgctaacaaaccggacttggcttacgacatgtgtataact
gtcgccccggactgcatagggtatggttcaaacaccgctgaaggaaccggggaacatggt
tcctaccaaaccacagaagcaatcagagagagctacggctacgaagaaaccactgaagca
gctagagaaagttacggttcctaccaaagcaccgaagcaaatagagaaccatacaacgct
aatataggtatagttataactcgcaccgaatcaccgtttagaaacagaaatcgaaacaaa
ttcagaaccggttcgaatgactacagacagcaaactttacgtcgaaacgaatcgcccaac
agaatcgattcgaatgaatatagacgaggaggtctcgttaatcgaaatcgcccacctggt
agaatcgaatctaactacgattccattcatagagaaagcggattataccgaaaccagccg
ccgatcacaatcgagtcgaatacaggaaatcgttttaacgaagtaaatgaatcgagcagc
tgggcgaatagagcggccacagaaaggccgtactggcaggtagccgagaactacggattt
accgattctgacgaaaactccatattcggtcgattcacagacaacgatgaagttctgtca
accctctccaacgtcgaggtcacatcgaccacgccagcactcaccaccaccatgcgaggt
accgaagaagagtctgttttcactacggagtcatcatacacacccgtcactacagaggac
tcggactggctcacacatccaccagagtacgatggcaacacctctatctacgacaacaca
gacacgtactacgactacgggtcgggcacgtacatggggccgcggggctaccccgggccc
cctggccagcctggccccagaggccccaagggcgacccggggaaacccggcctggaggga
cagcagggcttcccagggcccccgggacacgtctttgtggtacctctaacacaggcaggc
aacgagaaggggcccgacgctcagtctgaggcgttaaggcagattctaacccaacacatg
gcggcgatgcggggcgctgaagggccgatgggtttgacgggcccgcccggccccgagggt
gacaccggacccgaggggcccaagggcgaacagggcgaccagggcgagccggggcccccg
gggctgaggggcctccaggggccgccggggcgactggggcggcggggccacgccgggcga
gacggggagcggggtttccccggaccacctggggctaagggggagcagggctacccgggg
cagatggggctgccgggggacaaaggcgagcggggcacgccgggacagtcgggggaagtc
ggggccccgggacaggacgggcctccgggagacgacgggcccccgggaccacccggccta
gcgggagaactgggtccacgtggattcatggggccgcgaggttatcccgggctgatcggc
taccccgggatcccgggcaacgaggggccgcagggggctaagggggccgctggtcagccg
gggccaccgggggccatgggccagcccggtccgatggggccaccgggctccgctgggccg
cagggaccgacgggcgccccgggaatacagggtactcaaggcaagccgggtatgtcgggg
cttcccgggccggaggggtctcccggtactccggggaatccgggacagcagggctcaccg
ggagatgcaggcccgcctggaccacaggggatgctgggattccccggcgggcgggggccg
aagggcgaggaggggccgcggggtcagcccggcgacaagggagataagggcgtccgaggt
atcgaaggtgaaaagggtgaaatgggctcaaaaggggaaagaggcctgcctggagagcct
ggcccgccgggaatcgaagggcccgaaggacagaagggaatagaaggaccacgtggtgag
acgggatcgatagggccatctggtgagaagggcgccacagggccccaagggcctcagggt
tacccgggcagccagggggagaagggcgacaagggcgcttacggaagacgaggcaggagg
ggcatgaaaggagttgctggacctatcggaaatcctggagatcgaggcgaatctggccca
agaggataccgcggaccgcgcggtcgtcgcggctccgacggaccgccggggccaaaaggg
gacaccggtcagcccggaccgcccggatcgataggggaacgtggccctcaggggctggag
gggccacgggggttccccggaagtaccggtcctcctggagctgacgggaaagctggcctg
ccgggaccaccgggggaaagagggcctacgggtgaaacaggcgcacccggtctttcaggg
ccaccggggcctgccggtcctcagggaccaaacggggaaccgggccctgctggtcctcaa
ggcccgtccggtattccggggacaccgggtgaaggtggggcccccggggaaatgggcaaa
gcgggcccgccagggctaccggggccagagggaaaggctggaccggtcggctcgcccggt
cctcagggtaataatggagaagctgggttgcctggtgtaccgggcactcccggccaaaaa
ggtgacatgggccctacggggccggctggagtgagaggcgataagggcgagcagggcgag
ccggggagggaaggaccgcagggaccaataggacgggacggaccgaggggctcaccaggg
ccagggggacagaaaggagaaatcggagaacctggacctattggtccggtgggtcgagat
ggactcccaggtccacggggcctgaccggggccccggggccagttggtccgcccggggaa
gacggagacaaaggagacgcggggccacccggggaaaagggctttaagggatctatgggt
gaaccgggcccaacgggtgcaccaggtattcaaggcctaagaggcgagcctggtccagta
gggctccccggtgacaagggccctcagggtgaccctggcccgccagggatacctggtagt
gatggagtgaggggacctccaggaccgattggcaaaactggccctgaaggttccaagggt
gagcaaggtggaaagggcgatcggggagtcgtagggcctaaaggtccgcctggcccagcg
ggactaacagggcctccagggatgcgtggggccaaaggtaaccagggagaacctggaccg
cgggggccacagggggatgcgggtgcgattggtaacccaggggcacccggacccatcgga
ccgcaaggaccagaaggaaaaatggggccacgtggtttaactggacccaaaggtgacgac
ggcagtccggggcagcaaggagaacccggcatcataggtccgaaaggacccgaaggaccg
aaaggcgacccaggaccggccgggttccctggagaccggggcgaatctgggccccagggt
ataaagggtgagcccggactggatgggcctgaaggcagcgtggggccgcctggtccacca
ggcccggcggggcccatcggcaaaccgggtgaaacgggattacctggtaccccgggtacg
gaaggagcagctggggcccagggtagtcctggatcgccaggggaaaaaggtgacacgggc
cccaagggtgccccgggagagccaggccacgtgggccccgcggggcctccgggaccggag
gggcagcgcggcgtgcgaggcattcctggacctacgggtgacgtgggagctccaggcatg
gttggaccagagggaccgtccggtgctacaggaccaccaggtggccagggtcccaagggg
gacaagggcagccgtggaccgaaaggccacatcggggatacaggtccaatgggaattaaa
ggagatcagggagagccgggaaaacaaggactgccggggccacaaggacctattggcccg
aaaggcgaaatgggtccaataggtccaactggaccgaaaggcgatccaggcccagtgggt
gcacccggtcctgaagggcccctaggaccgaagggctcagacggccaggacggacggccg
gggcctccggggccagctggaccagccgggcccccgggccccccggccccgccgccacaa
atacctatggagttcttcacgtcgagtaggagacggcgaagtgtgcagactgattccttt
gaagccactactgatgatgatttggatgaagaagaagacctggactgggtgggcgaggtg
atgtcgggcgttgtggcggcgcgcggcgcgctggagctggcgcggcggccgcgcggctcc
gccaccagccccgctctctcctgccgcgacctcgcgcactcacaccacaacctcactgac
ggtctatactggatagacgctcgcggcgccagctcccggcctatgcaagtgtactgtatg
gggcagagcacctgcgtgtaccccactaacatagaagaggacgtttactccgagaagtct
ggacaaaaattctcgaagctggagaatggatataagataatgtacgacagcgacggggca
ggcggcgtgcagctgcggttcctgcgactgctgtccaccgtcgccaggcagaacttcacc
tatgtgtgcgaaaacaccaagatggcgcaaaggtccgacatccccgctgatctgtcgagg
gtgaacaagatcaaactgttcggtcagaactccgtcgaattcaaggagcctcaagttata
aaggacacctgcaaggacggtgtcggcgagatagttctagaagtgaggacatctcgtagc
gagcggctgcccatcaccgacttccagccgctgaccttcgtcgacgccgaacaccgcttc
tccttcaaacccggacccatctgcttcacttga
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