Aricia agestis (brown argus): 121730945
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Entry
121730945 CDS
T09904
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aage
Aricia agestis (brown argus)
Pathway
aage04382
Cornified envelope formation
aage04512
ECM-receptor interaction
aage04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121730945
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121730945
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121730945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aage04147
]
121730945
00536 Glycosaminoglycan binding proteins [BR:
aage00536
]
121730945
Exosome [BR:
aage04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121730945
Glycosaminoglycan binding proteins [BR:
aage00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121730945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121730945
NCBI-ProteinID:
XP_041976117
LinkDB
All DBs
Position
1:complement(19488883..19502353)
Genome browser
AA seq
1825 aa
AA seq
DB search
MAVHVLWSVAALVSLIGVNTQDYPRGDVEENQVYPGEWDTSSRSGYPQPTANTYGLSRRP
DFDPPRPNPTFGVQSRPNAPFGDPPRPNPPFGHNFAVYDPSTRQRTTVFDRNCTAPGTCI
PKCFAEKGNRGIPGMPGPEGPRGAPGSEGSPGPQGPKGQQGPQGPQGPRGPKGDRGLPGA
QGFVGLTGPQGAQGEPGLRGIDGRDGCNGTDGLPGPQGLPGYPGPRGLKGGKGDKGDKGE
AAYMGRYEKGQKGEPGADGMRGPQGPVGRDGPTGPAGPRGDPGALGLTGPKGDKGGKGIK
GRSIRGEKGDRGDQGEKGSGCPPSKVFGNNNNAIKGVKGDSGPKGDKGEPGRIGDKGDTG
EMGQQGLPGQMGIKGEKGIRGNPGEQGRIGKFGVAGPIGQKGDRGDDGLPGLPGRPGSKG
EPGRDGMPGQPGIKGVPGRPGGRTGSSGPPGPQGPRGYDGPAGPPGTDGRPGERGETGPM
GPRGGQGKPGAPGIEGPAGLKGQKGEAGLDGLRGDVGPRGVPGDSGPQGPRGPKGESGFS
IPGPKGSSGYHGRDGDKGQKGEKGYQGLRGESGNSTLGTPGSPGEMGPQGEKGDKGSSGL
DGQPGNPGPKGDIGGRCNECFPGQPGRKGDRGLDGTPGEPGVRGPPGRDGAPGERGTDGA
DGEPGSPGAPGERGTEGPIGPPGERGDSAIIPSDLIKGPPGEKGNTGERGPRGVKGERGP
PGPRGDRGLQGMPGQKGDQGRMGQRGQDGIPGEDGLPGLDGAKGASIKGEKGYFGEPGEK
GDRGFSGRMGEKGEPGNCPNSLIDLTKGDKGSQGFQGPPGPQGIKGDKGNQGRTGATGFK
GEPGLDGRPGAVGPRGTPGLKGDKGELGSMGFPGTTGEVGPRGFPGTPGNTGDKGEIGPS
MPGPRGQPGLKGDKGDEGPRGSTGPPGFDGPKGLTGLSGEKGDAGIPGRPGLQGLQGEKG
DNGPVGPPGRPGFDGIPGRDGQKGQQGFPGRPGNPGVIGLPGKKGEPGTPGREGPKGFPG
TRGFKGVRGNPGVPGNPGDKGDKGDRGYSGQPGSPGLDGPEGRPGVLGEKGDKGIAGPYG
SPGFPGALGEKGDLGLPGPRGPKGEPGLAAEKGVKGEPGLYGAPGKDGLPGLIGDKGDKG
DIGLPGYGRPGAPGLKGDIGPPGIDGIPGFKGETGPRGFPGLAGPKGDRGFPGQDGVPGV
PGMDGPVGAPGEAGWPGVDGPKGGKGDRGFPGRDGLNGTKGERGLQGPAGPPGPLGYPGP
PGDIGMPGLSIDIKGDKGETGLPGQPGLKGDKGERGRDGIEGIKGQKGEIGLMGFKGEQG
LEGLQGDKGDTGPAGPGGIPGRTIKGEKGLPGLPGKHGRAGNTGTRGEKGEQGLQGLPGS
TGPPGRPGLPGPMGLKGDTGPEGLAGPPGRDGSPGTPGPPGFRGQKGERGEKGAIGFGLP
GERGDQGPPGLPGIMGQKGERGERGSDGFSGIQGPMGVQGDKGDKGMFGIQGFRGYEGPK
GDKGEAAAIIYGRKGETGPPGRPGQDGVPGFDGPPGEKGMDGIQGPKGDKGPPGPRGPQG
PRGLQGFAGLQGDRGEAGLQGLPGSPGAPGQPCVTTDYLNGILLVKHSQTEMVPHCEPGH
VKLWDGYSLLYIDGNERAHNQDLGYAGSCIRKFSTMPFLFCDLNDVCNYASRNDRSYWLS
TNEPIPMMPVENQEISKYISRCVVCEVPANVIAVHSQTIEVPTCPGGWSTLWIGYSFIMH
TGAGGQGGGQALASPGSCLEDFRATPFIECNGEGGTCHHFANKLSFWLTIIEDNKQFSKP
ERETLKAGKLLERVSRCAVCIKNTT
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccacgtactttggtcggtggctgctctggtgtcgttgattggagtgaatacg
caagactatccacgtggtgatgtagaagaaaaccaagtttatcccggggaatgggatacg
agctcgaggtccggctacccgcagcccacagctaacacgtacggcctatcgcggcggccg
gacttcgatcccccgcggccgaaccccaccttcggcgtccaatcgcggccaaacgccccc
ttcggtgaccccccgcggccgaacccacccttcggccacaacttcgccgtatacgacccc
agtaccaggcaacgcaccaccgtcttcgacagaaactgcacagcaccgggcacctgcatc
ccgaaatgtttcgccgaaaagggaaaccgaggtattccaggaatgcctggaccggaaggt
ccacgtggtgcgccaggatccgaaggttctccgggtcctcaaggaccgaaagggcagcag
ggaccgcagggaccgcaaggccctcgaggtcctaagggtgacagaggtctaccgggggct
caaggtttcgttgggttgactggaccgcagggggctcagggtgaaccaggtttgcgtggt
attgacggaagagacggttgcaatggaaccgatggcttgccgggtcctcaaggtctaccg
ggataccccggtccccgtgggttgaaaggaggcaagggagacaaaggtgacaaaggagaa
gctgcgtacatgggtaggtacgagaaaggccagaagggagagcccggcgctgatggcatg
cgcgggccgcagggacccgtggggcgcgacggcccgaccggacctgcaggacctagaggc
gaccctggagctttgggcttaactggaccgaaaggtgacaaaggaggtaaaggtataaaa
ggacgatcgataagaggtgaaaaaggtgatcgcggtgatcaaggcgaaaaaggctcgggc
tgtcctccctctaaagtattcgggaacaacaataacgccattaaaggcgtgaaaggggac
agcgggcctaaaggtgacaaaggagaaccaggacgcatcggtgacaagggagacactggg
gaaatgggacagcaaggtttgcctggccaaatgggtatcaaaggagaaaagggtattcga
ggcaatccaggagaacagggtcgtatcggaaagttcggtgtcgctggacctattggacag
aagggagacagaggtgacgatggcttgccaggtcttccaggaaggccaggtagtaaaggt
gaacctggtagagacggaatgccaggacagcctggtatcaaaggtgtgccgggtcgacca
ggcggtcgaacaggttcgagcggcccacctggcccacaaggacctagaggatacgacgga
cctgccggccctccgggtacagacggcagacccggtgaaagaggtgaaacgggaccgatg
ggcccacgaggagggcaaggcaaacccggtgctcctggaatcgagggaccagctggatta
aaaggacaaaagggagaggctggactagatggcttacgaggagatgttggaccgcgcggt
gtacctggagactcagggccccagggaccaagaggccctaagggtgaatctggattctcg
attccgggtcctaaaggatctagtgggtaccatggaagagatggcgacaaaggccaaaaa
ggtgaaaagggttaccaaggattacgaggtgaatctggtaattctacattaggtactccc
ggaagcccaggtgaaatgggaccgcaaggtgaaaagggtgataaaggaagttccggtctc
gacggtcaacccggaaatccaggtccaaaaggagacatcgggggtcggtgtaatgaatgc
ttccctggtcagccaggtcggaaaggtgatagaggattagacggaactccaggagagcct
ggagtacgtggaccacccggtcgagatggagctccaggagaacgtggcacggatggagca
gatggagaacctgggtctccaggtgcaccgggagagagaggcactgaaggaccaatagga
cctcccggtgaaagaggagacagtgccattataccttctgatttaataaaagggccacct
ggagaaaagggtaacacaggcgaaagaggtcctaggggtgtcaaaggggaaagaggaccg
cccggaccaaggggagatcgcggcttgcaaggcatgccggggcaaaagggagaccaaggt
agaatgggtcaacgtggacaagacggtatacccggagaagatggattacccggcttagat
ggcgcaaaaggagcttctattaaaggagaaaagggatatttcggtgaacctggagaaaaa
ggtgatagagggttctcaggaagaatgggagaaaagggtgaaccaggaaattgccctaat
agcttaatagatctcacaaagggtgataagggatctcaaggttttcaagggcctccagga
ccccaaggaattaaaggtgacaaaggtaaccaaggacgtacaggtgctacaggatttaaa
ggtgaacctggattagacggtaggccaggagctgttgggcctcgcggaacacctggactt
aaaggcgataaaggagaattgggttccatgggttttccaggaacaacaggagaggtggga
cctagaggtttcccaggtactcccggaaatacaggagataaaggagaaattggtccatct
atgcccggtccgagaggtcaacctggtctgaaaggtgacaaaggtgatgagggcccaaga
ggttcaacaggtccgccaggttttgacggtcctaaaggtcttactggactaagtggtgag
aaaggagatgcaggcattcccggacgaccgggtcttcaaggtcttcaaggagaaaagggt
gacaatggtcctgtaggtcccccaggaagacctggatttgatggcatcccaggaagagat
ggacaaaaaggacaacaaggattccctggacgcccaggtaatcccggtgtaattggtctt
cccggtaaaaaaggtgaaccagggacacctggacgtgaaggaccaaaaggatttccggga
acaagagggttcaaaggagtacgaggtaatcccggtgttcctggcaacccaggagataag
ggagataagggagatagaggctactcaggacagcctggatcaccaggcttagacggacca
gaaggtagacctggagtactcggagaaaaaggtgataaaggtattgctggaccatatggt
tcaccaggcttcccgggagcgctaggtgaaaaaggtgatttaggtttacctggtcctaga
ggtccaaagggagaaccaggcttagcagctgaaaagggcgttaaaggagaacctggatta
tatggtgcaccaggaaaggatggcttaccaggccttattggggataagggggacaaaggt
gacataggattacctggatacggtcgccctggagctcctggtttaaaaggagatattggc
ccacctggaatagatggtattcctggattcaaaggcgaaacaggtccccgtggtttccca
ggtctagcgggtcctaaaggagaccgaggttttcctgggcaagatggagtgcctggtgtt
cctggcatggatggccctgtgggtgctccaggtgaagcgggatggcctggagtagacggt
cctaaaggtggtaagggtgatagaggctttccgggaagagatgggttaaatggaactaaa
ggagaaaggggtttgcagggcccagctggacctcctggacctttgggatatccaggtcct
ccaggtgatataggaatgccagggctttctattgacatcaagggtgataaaggagaaact
ggtttaccgggccagcctggccttaaaggagacaaaggagaaagaggtcgggatggcatc
gaaggaataaaaggacaaaagggagaaattggattgatgggattcaaaggagaacagggt
ttggaaggccttcagggtgacaaaggtgacacgggaccagcgggaccgggtggaataccg
ggacgcaccattaaaggagaaaaggggcttcctggtctaccaggaaaacatggccgagcc
ggtaatacgggtacacgaggagaaaaaggagaacaaggcttacaaggtttgccgggatct
acgggtccacccggaagacctgggttaccaggtcccatgggtttgaaaggtgacacgggt
cctgaaggacttgctggaccgccaggacgtgacggtagcccaggtacaccaggaccacca
ggattccgaggccaaaagggagaaagaggtgaaaaaggtgcaataggatttggcttgcca
ggtgaaagaggagatcaaggtcctcctgggttacctggtattatgggacaaaaaggtgaa
aggggtgaacgtggatccgatggcttcagtggtatacaaggacctatgggtgtccaaggt
gataagggagataaaggaatgtttggtatacaaggtttcagagggtatgaaggtccaaag
ggtgacaaaggtgaagcggctgcaattatatatggccgaaagggtgaaacaggaccaccg
ggtcgtccaggacaggacggagttccgggctttgatggaccaccaggtgagaagggtatg
gatggtatccaagggccaaaaggagataaggggccacctggtccaagaggaccacaagga
cctagaggacttcaaggatttgccggcttgcaaggtgatagaggagaggccggtttacaa
ggattgcccggttcgcctggagctcctggacagccatgcgtcacaactgattatctgaat
ggcattcttctggtaaaacatagtcaaacggaaatggtaccgcactgtgaacctggtcat
gttaaattgtgggatggatattcacttctttacatagacggcaacgaaagggcccacaac
caagatttaggttacgccgggtcttgtattagaaaattcagtacaatgccattcttgttc
tgtgatctaaatgacgtttgcaactacgctagccgaaacgatagaagctactggttatcg
actaacgaacctattcctatgatgccagtcgaaaatcaggaaatttctaaatatatatcg
agatgtgtggtatgtgaggtgcccgctaatgtaatagctgtacatagtcagacgatagaa
gtgcccacatgccccggtggctggagtacgttatggataggatacagttttattatgcac
actggagcaggtggacagggcggtggacaggctctggccagccctggatcttgtttagaa
gactttagagcgactccgttcatagaatgtaacggtgagggcggtacgtgtcatcacttc
gccaacaaactcagtttctggttgacaatcatagaagataacaaacaattttcgaagccc
gaacgtgaaacactaaaagctggaaagcttctagagagagtttcacgttgcgctgtatgt
ataaagaatactacataa
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integrated database retrieval system