Aricia agestis (brown argus): 121731729
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Entry
121731729 CDS
T09904
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121731729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aage03019
]
121731729
Enzymes [BR:
aage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121731729
Messenger RNA biogenesis [BR:
aage03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121731729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121731729
NCBI-ProteinID:
XP_041977252
LinkDB
All DBs
Position
11:complement(4199914..4210948)
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AA seq
529 aa
AA seq
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MNITNKNYNDEIDQIIYNLKQCSFVGFDAEFNGLLTGERFKHRLFDSCKDRYDNIKNEMS
NMVITQVGLTLFQYNRDLENYTATVYTFHLCPQVVGEIDQSFTFHASSLQFLCRHNFNFN
KFIYDGLPYLNREEEEYVRNQLKKKTLFNELYHSLDIDVEKILKQISSDISKWLIANEEN
TIYFDVGNPIMRYLAHLQIRERFPDLLTTDSLGNSHKILVYRDKTIEGAVGLPEETLEEN
LMKHLLGFSQIIELLSKLNKPIIGHNMFLDTILLHNQFIGKLPDSYDTFKNNINKLFPTI
YDTKYISHEMSKKLSIDEVWKSNALQDLYEFFSQGRCKRLEKGVNFIQLTTAFDVKQSYH
EAGWDSACSGYCFIRLAHWAGCELRGHYRPLAPSEKLAAVAQHRNRVNVIRGAVPYMNLM
GADPPSHRPDLLHVKSMQERIINIGKVTAILANFGSIDVKPYGRRTALIAASTHNTVDKI
LKQFKDNREYKITKFSALKHSAVSRVALLSSALLTGSLFLYLLHKGVKQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacgaacaaaaattataacgacgaaatcgatcaaatcatatacaacttaaag
caatgttcttttgtgggttttgatgcggaattcaatggattgctcactggagaacggttt
aaacacaggttgtttgacagctgcaaagatagatatgacaatattaagaacgaaatgagc
aacatggttattactcaagttggtctaactctatttcaatataaccgagacttggaaaac
tacacggctacggtgtacacattccatttgtgtccacaagttgtgggagaaatagaccag
agtttcacttttcatgcatcatccctgcagttcctatgtagacataacttcaatttcaat
aagtttatttatgatggattgccatatttgaatagagaagaggaagaatatgtccgtaat
caactgaagaagaaaacattattcaatgagctgtaccacagtctggatatagatgttgag
aaaatacttaaacaaatatcttcagatatatccaaatggcttatagcaaatgaagagaac
acaatatattttgatgtaggcaaccctataatgaggtacctggcacacctgcagatccga
gaaaggttcccggacttactcacaacagatagcttaggtaatagccataagatacttgta
tacagagataaaactatagagggcgctgtgggcttaccagaggaaacactagaagaaaat
ctaatgaagcatttactaggattttcacaaattatcgaattactgtctaaactcaataaa
cctatcattggacataacatgtttttagacacaatactactacacaatcagtttatagga
aaactgcccgacagctatgatacatttaagaataatataaataaactatttccgactata
tacgacactaaatatatatcacatgaaatgtccaagaagttatcaatagacgaagtatgg
aaatctaatgcgcttcaagatttgtacgagttcttctcgcaaggcagatgtaagcggcta
gaaaaaggagtaaactttatacagctgaccacagcgtttgatgtgaaacaatcctatcac
gaggctggctgggattccgcttgctcaggctactgcttcatccgtctggcgcactgggcg
ggctgcgagctgcgcggccactaccgccccctggcgccgagcgagaagctcgcggccgtg
gcgcagcaccgtaacagggtcaacgtgatacgcggcgccgtgccgtacatgaacctcatg
ggcgcggatcctcccagtcaccggccagacctgctgcacgtcaagtccatgcaggaacgc
attatcaacatcggcaaggtaacagctattctggcgaactttggttcaatagacgtgaag
ccctatggaagacgcactgcgcttatagcggctagtactcataatacggtagacaagatt
ttaaaacaattcaaagacaatcgggagtataagataacgaagtttagtgctttgaaacac
tccgctgtcagccgcgtggcattattaagcagtgcgctgctcacagggagtttattcctg
tatctgctgcataaaggagttaagcaataa
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