Aricia agestis (brown argus): 121732216
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Entry
121732216 CDS
T09904
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121732216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aage03019
]
121732216
Enzymes [BR:
aage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121732216
Messenger RNA biogenesis [BR:
aage03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121732216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121732216
NCBI-ProteinID:
XP_041977961
LinkDB
All DBs
Position
12:13728615..13764387
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AA seq
648 aa
AA seq
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MEITRKNFKESLPLVEDSINKADFLVIDTEFTGLSKGRDVSIFDTPQEYYLTLLNGSSEF
LLIQFGLCAFVWDEDKQHYMNEAYNFYLFPRGRPGPEKIFLCQSSSLDFLAAQGFDFNKL
IREGISYMTEPMETKLRENLTERQKSYSVEKDVITIPEENKSQIDTICQNIRKFIDKKEE
DSMEIDRCNAFIRRLVFQEVRLRFKDEVFVESIVLENKNRVLKVSRITSSADVKDKDNLK
KEKEWEEFEEAVGFSKVARMISQSEKLVIGHNMVLDVLHTLNHFFQPLPSDYPTFKEFAH
CMFPRLLDTKYMSSLPPFKDKVNSSVLPHLLLTLSEPPFSLPVADCVDGRGYKQKDEKAH
EAGYDAYITGLCFLAMHAHLARGSRVADAAVRPYLNKLYLARTAHQDSPYINLAGPDPSP
SRDHVFHLTFPKEWQRNDLNQLFSAYGQITVQFLDDTSALVALSRRDLAKSVARAFAHNK
RVQLQPYYIYKGHNKMASQERREDSWVGRDKLVSRTPEQVARTTPAAKSTNGTPTTPEVK
RPRSNSSGAVPTRKRTSSGVFQVEESEPPPKRTEAARSRSEEGRKTPEEVNGRKEVPAKS
EKEVAKREKKISKSEMEIAKSIEKKAIEVFEASNTQCVAAFQESDSWD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaaataactcgaaaaaattttaaggagtccttgcccttggtagaagattctataaac
aaagctgactttctagtgatagatacagagtttaccggcctgtcgaaaggccgagatgtg
tctatattcgacactcctcaggagtattacttgacgcttctaaatggatcgtccgagttt
ctgttgattcagttcggcctgtgcgccttcgtctgggacgaagacaagcagcattacatg
aatgaagcctataatttctacttatttcctagaggacgaccgggcccagaaaaaatattt
ttatgtcaaagttccagcttagactttttggcggctcagggatttgacttcaataaatta
ataagagaaggtatatcatatatgactgaaccaatggaaacaaagctaagggaaaacttg
actgagagacagaaatcatattcagtagaaaaggatgtaatcactattccagaagagaat
aaaagtcaaatagatactatttgccaaaacatacgaaagtttatagacaaaaaggaggaa
gattccatggaaattgatagatgcaatgctttcattcgtcgtttagtcttccaagaagtg
cgcttgagatttaaggatgaagtgtttgttgaaagtatagtgttagaaaataagaataga
gtgttaaaagtaagcagaatcacatcatcagcagatgtcaaagataaggataatctaaaa
aaagaaaaagaatgggaagagtttgaagaggctgttggtttctcaaaagtggcaagaatg
ataagtcaatcagagaaattggtgattggccacaacatggtgttggatgtgcttcacact
ttgaatcattttttccaacctctgccatcagactatccaacctttaaggagtttgctcac
tgtatgttccctaggttgttagacacaaagtacatgtccagtctgcctccgttcaaggac
aaggtgaactccagtgtgctgccacacctgctgctcacactctccgagccacccttttcg
ctgcctgtggctgattgtgttgacgggcgcggctacaaacaaaaagacgagaaggcgcac
gaggcgggctacgacgcctacattaccgggctgtgcttcctcgcgatgcacgcgcaccta
gcacgaggctcgcgcgtggcggacgccgcggtgcgcccctacctcaacaagctgtacctc
gcgcggacggcgcaccaggactcgccctacatcaacctggccggccctgacccttccccg
tcccgcgaccacgtgttccacctgaccttccccaaggagtggcagaggaatgatctcaac
cagctgttcagcgcttacggtcaaatcacggtgcagttcctggacgacacgtcggcgctg
gtggcgctgtcgcggcgcgacctcgccaagtctgtcgcccgcgccttcgcccacaacaag
cgcgtgcagctgcagccctactacatctacaagggacacaacaagatggcgagtcaggag
cggcgcgaggacagctgggtgggccgcgacaaactagtaagcaggacccctgaacaagtc
gctaggaccacaccggcagcaaagagcaccaacggcactccgaccactcccgaggtgaag
cggccgcggtccaacagctccggcgcggtgccaacgcgcaagaggacttcctccggcgtc
ttccaggtggaagagagcgaacctccgcccaagaggactgaggcggctcgatcgcgctcc
gaggagggcagaaaaacaccagaagaggtcaatggccgaaaagaggttccagcaaagagt
gagaaagaagtagcaaagagggagaagaagatatcgaagagcgagatggaaatagcgaag
agtatcgagaagaaagcgatagaagtattcgaggcgagcaacacgcagtgcgtcgctgcg
ttccaagagagcgacagttgggattag
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