Aricia agestis (brown argus): 121733002
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Entry
121733002 CDS
T09904
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121733002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aage03041
]
121733002
Enzymes [BR:
aage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121733002
Spliceosome [BR:
aage03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
121733002
Complex B
121733002
Complex C
U2 SnRNP specific factors
121733002
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
DUF5538
Motif
Other DBs
NCBI-GeneID:
121733002
NCBI-ProteinID:
XP_041979000
LinkDB
All DBs
Position
13:1201442..1222436
Genome browser
AA seq
764 aa
AA seq
DB search
MSYNAGGGKGFGFAGFSMPKRNPSNVSLHAVPPPSGPMHAVPPPSGLSKQGYSTMNAITQ
NAVTGNWGQIGKKRSKTEDEYFDDDDEPPTPALAYIPAPGSPTHQASSSKAEDDEEDPLD
AYMAGLEQQAAKDLIMSKENAVTGKGDGARGTRGDIDDMDDEESYYKYMEENPLTTGDDG
SDVEIEYDEDGNPIPPPKKKFIDPLPPIDHSEIKYEPFEKNFYTPHEEIENLDQQKVEEL
KKNLGVKISGPDPPKPVSSFGHLGFDEQLMKAIRRSEYTQPTPIQAAGIPAALSGRDLIG
IARTGSGKTAAFLWPLLVHIMDQKELAPGDGPIGLILAPTRELAQQIYMEAKKFGKVYNI
RCVCCYGGGSKWEQSKALEGGAEIVVGTPGRVIDMIKCKATNLQRVTYLVLDEADRMFDM
GFEPQVRSICAHVRPERQALLFSATFPRRVERLARDALHDPVRVTHGAAGEASHLVTQYV
RIFNKPEEKWSWLLKNLVEFLSAGSVLIFVTKKLDAEQTAANLGVQQYDALLLHGDMEQA
DRNKVITAFKRQESNILVATDVAARGLDIPHIRTVINYSVARDADTHTHRVGRTGRAGVR
GAAHTLLLRHADREFAGHLVRNLEGAMQDVPEELMQLAMQSSWFRKSRFKKGKGKNLNIG
GCGLGYKERPGLPAPTEEAVTAAGAAAGAAPGGGPATDRLASLRQAFRVQYNQFTASTDH
SWEQTRPVLQPGVNAPAADPAPEHAPAADKPERTRKSGKKSRWE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagctataatgcgggtggcgggaaaggttttgggtttgcgggtttttctatgcccaaa
aggaacccgtcgaatgtgtctctacatgcggtgccgcccccgtcggggcccatgcacgca
gtcccgccaccttcggggctctccaagcagggctactccaccatgaatgccatcacacaa
aacgccgtcaccggtaactggggacaaataggcaagaagagatctaaaacagaggacgag
tattttgatgatgacgatgagccaccgacccctgcactggcctacatcccggctccggga
agccccacacatcaagcctccagctccaaagctgaggatgatgaggaggatcctctggac
gcatacatggctggtctcgaacagcaggcggccaaggatctgatcatgagcaaggagaat
gcggttacaggcaaaggggacggagcgagaggcaccagaggtgacattgacgatatggac
gatgaagagagttattataagtatatggaagaaaatccactgactactggtgatgatgga
tctgatgtggaaattgaatatgacgaagacggcaaccccattccaccaccaaagaagaag
ttcatagatcccttgccaccgatagatcactccgagataaagtatgaaccatttgagaag
aacttctacactccacacgaagagattgagaatttggatcagcagaaagttgaagagctg
aagaagaatcttggtgttaagatctcgggtcctgatccccctaagccagtcagcagtttt
ggccacctgggctttgatgagcagctgatgaaggctatcaggcggtcggagtacactcag
cctacaccgattcaagcagccggcatacctgcagctttgtctggacgggatcttattggt
atcgcgcgaaccggttcgggtaagactgcggcgtttctctggcccttgctggtgcacatt
atggaccagaaggagttggcaccgggggacggacctataggcctaattcttgcacctacg
agggagttagcacaacagatatatatggaagcaaaaaagttcggcaaagtatacaacatt
cgctgtgtgtgttgttatggaggtggatcaaaatgggagcagagcaaagctttagaagga
ggggcggaaatagtggtgggtacacccggccgagtgatagacatgatcaagtgtaaggcg
accaacctccagagagtcacatacttggtgctcgacgaagctgacagaatgttcgacatg
ggtttcgagccgcaagtgcggtcgatctgcgcgcacgtccggccggagcggcaggcgctg
ctgttctctgcgacgttcccgcgccgcgtggagcggttggcgcgcgacgcgttgcacgac
cccgtgcgcgtgacgcacggcgctgcgggcgaggcgtcgcatctcgtcacgcagtatgtt
aggatattcaacaagccagaagaaaaatggtcgtggttgttaaaaaatttagtggaattc
ttatcagctggaagcgttcttatattcgtcactaaaaagctagacgcggagcagacagcg
gccaacctgggagtgcagcaatacgacgcgctcttactgcacggtgacatggagcaggcg
gaccggaacaaagtcatcacggcgttcaagcgacaggagtccaacatattggtggctacg
gacgtcgcggcacgtggtttagatatcccccacatccgcaccgtgataaactacagcgtg
gcgcgcgatgcggacacgcacacgcaccgcgtgggacgcacggggcgagctggcgtgcgc
ggcgccgcccacacgctgctgttgcgacacgccgaccgcgagttcgccggacacctcgtg
cggaacctcgagggcgccatgcaggacgtgccggaggagctgatgcagctggcgatgcag
tcgtcgtggttccgcaagtcgcgcttcaagaaggggaagggcaagaacctcaacatcggc
ggctgcggactcgggtacaaagagcgtcccggcctgcccgcgccgacggaggaggcggtt
accgcggcgggggcggcggcgggggcggcgccggggggcgggcccgccacggaccgcctc
gcctcgctgcggcaggcctttcgagtgcagtataatcagttcacggcgtcgacggaccac
tcgtgggagcagacgcggccggtgctgcagcccggcgtcaacgcgcccgccgccgacccc
gcccccgaacacgcccccgccgcggacaagcccgagcgcacgcgcaagagcggcaagaag
agccgatgggagtaa
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