Aricia agestis (brown argus): 121734295
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Entry
121734295 CDS
T09904
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03020
RNA polymerase
aage03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121734295
09124 Replication and repair
03420 Nucleotide excision repair
121734295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aage03021
]
121734295
03400 DNA repair and recombination proteins [BR:
aage03400
]
121734295
Enzymes [BR:
aage01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121734295
Transcription machinery [BR:
aage03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121734295
DNA repair and recombination proteins [BR:
aage03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121734295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
121734295
NCBI-ProteinID:
XP_041980792
LinkDB
All DBs
Position
1:complement(14886721..14890447)
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDTEDDQYEEEEVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELHAEAQHSSGEIETPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALSFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADSTKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSSDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKKIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatacagaagatgatcagtatgaagaggaggaggtcgaggaaatatcttctgaa
ctatggcaagaagcatgttggattgtaatcaacgcttactttgacgaaaaaggtttagtt
cgacagcaattagatagttttgatgaatttattcaaatgtccgttcaacgcatagtcgag
gactctcctcctatcgaattacatgctgaggcccagcattcatcaggtgaaattgaaact
cctccaaaatatcatctcaaatttgaccaaatttatttatcaaaaccaacacactgggaa
aaagatggtgctccgtcacctatgatgcctaatgaagcacgtttaagaaatttaacttat
tcggcgccactttatgtagatataacaaaaacgattgtaaaggaaaatgaagaccccatt
gaaactcaacatcaaaaaacttttattggaaagataccaattatgctgcgttctacatat
tgccttttgagtaatttgactgaccgtgatttgactgagttaaatgaatgcccccttgat
ccaggtggctactttattataaatggatcggaaaaagtgttgattgctcaagaaaaaatg
gctacaaacactgtatatgtattcagcatgaaagatggaaaatatgcctataaaacagag
atccgttcatgtcttgaacatagttcaagacccacgtctactttgtgggtaaatatgatg
gctagaggaggtcagagtattaagaaatctgccattggtcaaaggattgttgccattgta
ccatacatcaagcaagaaataccgatcatgattgtctttagagctcttggttttgtagca
gatagagatattttggaacacataatttatgattttgacgatccagaaatgatggagatg
gtcaaaccttctttagatgaggcattcgttattcaagagcaaaatgttgctttaagcttt
attggtgctcgtggagctcgtccaggagttactaaagaaagacgaataaaatatgctcgg
gaaattctacaaaaggaaatgttgccacatgttggtgtctctgatttttgtgaaaccaag
aaagcttatttcctgggttacatggtccacagactgctgttagctgcattaggacgtcgt
gaactggatgacagagatcactatggaaataagcgtttggatttagctgggccattactg
gcttttttgtttaggggtctgtttaaaaatttgctaaaggaagtaagaatgtatgctcaa
aagtttattgataaaggtaaagatttcaatcttgaattagcaataaagacaaaaattatt
actgatggtttgagatattctttagctacaggaaactggggtgatcagaagaaagctcac
caggcaagagctggtgtatctcaagtattaaatagattaacatttgcttcaactctatca
catttaagacgtgttaattctcctattggtagagatggtaaattggcaaagcctcgacaa
cttcataatactttgtggggtatgatttgtccagcagaaacaccagaaggagcagctgta
ggtttggtaaaaaatttagctttgatggcttacatttctgttggaagtcaaccatcacca
atattggagttcttggaagagtggtctatggaaaatttggaagaaattgcaccctctgct
atagctgattccacaaaaatatttgtaaatggttgttgggtaggtattcaccgagaccct
gaacaattaatggccactctacgtaaacttagacgtcagatggatattattgtatcagaa
gttagtatgataagagacatacgagatagagaaataagaatatacactgatgctggcaga
atttgccgtcctttacttattgttgaaaatggagcattactacttaaaaagaaacatatt
gatcagcttaaggaaagggattacaacaattatggctggcagaaccttgtagctagtggt
gttgtcgaatacattgatacattagaggaggaaactgtaatgattgctatgagctcagat
gatttggcccaggttaaagaatatgcctattgtactacatacacacattgtgaaatccat
ccagcaatgatattgggggtatgtgcttcaattattccctttcctgatcacaatcagagt
ccaagaaacacatatcaaagtgctatgggtaaacaagccatgggagtttacataacaaac
ttccatgtgagaatggacactcttgctcacgttctgtattatcctcacaaaccattggtc
actacaagatctatggagtatctacggttcagagagctaccagctggaattaattccatt
gtagcaattttatgttacaccggatataatcaggaggacagtgttattttaaatgcatct
gcagttgaaagagggttcttcagatctgttttttaccgttcatacaaagattctgaatcc
aaaaagataggtgatcaagaggagcaatttgaaaaaccaactcgccaaacatgtcaggga
atgaggaatgctctatatgacaaactagatgatgatgggattattgctccgggtataaga
gtatctggtgatgatgttgtcataggtaaaactataacacttccagaaaacgatgatgaa
ttagaaggcactactaaacgttttactaaaagggatgcatctacctttttgcgtaatagt
gaaactggtattgttgatcaagtgatgttgaccttgaatagcgaaggctacaaattttgt
aaaataagagtcagatctgttcgaattccacaaattggtgacaaatttgcctcaaggcat
ggacagaaaggaacatgtggaatccaatacaggcaagaagatatgccgtttacttgtgag
ggacttacgcctgatattattattaatcctcatgctatcccatctcgtatgacaattggt
cacttgattgaatgtattcaaggcaaagtgtcttctaataagggagagattggagatgcc
actccatttaacgatgctgtaaatgtgcaaaagatttcgtcactgttacaagaatatggt
taccatttgagaggtaatgaagttatgtataatggccacaccggacgtaaaattaatgct
caagtgtttttgggacctacatattatcaacgtctaaaacatatggttgatgataaaatt
cattcccgagcgagaggaccagtacagattcttgtgagacaaccaatggagggaagagct
cgcgatggaggtttacgttttggggaaatggagcgagattgtcaaattgcacatggtgct
gcacaatttttgagagaacgtctttttgaagtatctgatccatatcgcattcatgtatgt
aatttctgcggattgatagcaattgccaatttaagaaacaatacatttgagtgcaaaggt
tgcaaaaataagacgcaaatttctcagatacgattgccttatgctgctaaattgttgttc
caagaattaatgtctatgaatatcgctccaagattaatggtcgtaaattaa
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