Aricia agestis (brown argus): 121734491
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Entry
121734491 CDS
T09904
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
aage
Aricia agestis (brown argus)
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aage03041
]
121734491
Enzymes [BR:
aage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121734491
Spliceosome [BR:
aage03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121734491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
R3H
HA2_C
Helicase_C
DEAD
Ank_2
YTH
Ank
HA2_N
AAA_19
AAA_25
nSTAND3
AAA_22
Ank_5
Cas3-like_C_2
AAA_14
T2SSE
ATPase
AAA_30
PhoH
NACHT
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
121734491
NCBI-ProteinID:
XP_041981037
LinkDB
All DBs
Position
15:15141013..15190499
Genome browser
AA seq
1308 aa
AA seq
DB search
MSSKKNKKSFGNKRFPIAESVSIALKIQLDKFLSDENETELKFPTFLSAQERGFIHETVA
KLGLKSKSRGKGVNRYLTIYKRLGSTIIQNDAKLILDSNMRCSIAELYNAFPITSKEKDD
LSCCPEKERSPQLAHKALGQLNNGVAQIPNTTYNPDLIKFREKLPVYEQRAELINAIWQN
QVVIVAGATGCGKTTQLPQLVLDQCAARGQPARVYVTQPRRISAVAVAERVAHERQEKIG
QSVGYQIRLESRVSPRTVLTYCTNGVLLRTLMAGEGALASVTHVFVDEVHERDKFSDFLL
IALRDALPRHKDLKLILMSATMDTAIFSRYFNDCPVLNVPGRLFDVQRYYLEDVLRLTGY
RSAAMRRAERDLRAAAAAPDSSYYGHLEEQKTAATETCGGKAGGGGEPLDAEMQADMDEF
LDECFNEGSADAFSQVVYMFMSEGVPLHAAHSRCGRTALMAAAARGLTAAAAQLLAIGAD
PLAKDKAGKTAHDHAAENGHAECAALLAASRPAAPPATDAAADDFLLDVYTHATPPDLVD
HDLLLALVRHLHLNMPRGSILVFLPGYDDIVALRDAVQACADMSAVKYQTFTLHSNMQTL
DQKKVFGPLPGARKIIISTNIAETSITIDDVVYVVDSCRVKEKYYESAGGVCSLQCVWAS
RACAAQRAGRAGRTQPGRCWHLCSRRRFAALPLTSVPEILRVPLQELCLHTKLLAPGNTP
IADFLSRALEPPSFLAVRNAVALLKTIGALTPTEDLTEIGRHLLDLTVEPKLGKMLLYAC
VVKCLDPVLTIVCSLANKEPFQIGGGGSAGAGHVARREFAADSHSDHMALLRAFQAWQSA
RAAGTERAFCARNLICGATMETVVGHRAQLLAQLRAIGLVKARGPGDIKDVNLNSEKWPV
VKAVLVSGLYPSVARVDRDSGTLRTSKEVRVRFHPKSILQTARGAGPQTLPTDWVVFEEI
SRVGRFCFIRTCTLVTPLTVALFGGPLRLGPGALTQRANPPGLSSDSDSEAEAPAAPDAA
VLALDDWTAFAADASDALSVYYLRQKLCALVVRRMANPAKPPTPLDEQILGTVVAVLGAE
ERNAGLQQPAGIGQRPRPLTVDAAGWRARPDDHPDDFGGPPHPGPYGAPRPSWRAEAPPR
GYSPQPYGGPGSPGSPNGRTLLANIEKYARNGDVGVRYFVARADDAPGAEAAPTGTGPAL
PFSQAFARKLQKLKQEGQRAIVFVSSAGAGKFVGAAAAGDGGVEWLSTAHVPFGAVRHVT
NALAGGARAVDARDGAELCAHSGRALLRAFHKPGLAPSAPRRRPPRPH
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaaaagaataaaaagagttttggtaataagcgtttcccgattgcggagtca
gtgagtatagcgctgaaaatacaactggataaatttttgagtgacgaaaatgaaacagaa
ttaaaattcccgacgtttttgtcggctcaagagcgaggcttcatccatgaaaccgttgct
aagctcggattaaagtcaaaatctagaggaaaaggtgttaatagatacctaacaatatac
aagcgtttgggttcaactattattcaaaatgacgctaagctgatcttggactctaacatg
agatgtagtatagcagaactatacaatgcatttccaatcaccagtaaagagaaagacgat
ctcagctgctgtcctgaaaaggagagaagtcctcagctcgctcataaagctctgggacag
ttgaacaatggggtagctcagattccgaacacgacttacaatccagatctcatcaagttc
cgggagaaactgccagtttatgagcagagagcggagcttataaatgccatatggcagaac
caggttgtgatagtggcgggcgcgacggggtgcggcaagacgacgcagctgccgcagctg
gtgctggatcagtgcgcggcgcgcgggcagccggcgcgcgtgtacgtcacgcagccgcgc
cgcatctccgccgtcgccgtcgccgagcgggtcgcgcacgagcgccaggagaagatcgga
cagtcggtcggataccagatccggctggagtcccgcgtaagcccgcgcacggtgctgacg
tactgcacgaacggcgtgctgctgcgcacgctgatggcgggcgagggcgcgctggcgagc
gtgacgcacgtgttcgtggacgaggtgcacgagcgcgacaagttcagcgacttcctgctc
atcgcgctgcgagacgcgctgccccggcacaaagacctcaagctgatcctgatgtcggcg
acgatggacacggcgatattctcgcggtacttcaacgactgccccgtcctcaacgtcccc
ggccggctgttcgacgtgcagcgctactacctggaggacgtgctgcggctgacggggtac
cgcagcgccgccatgcgccgcgccgagcgcgacctgcgcgccgccgccgccgccccggac
tcctcctactacggacatctcgaagaacaaaaaacggcggcgacggagacgtgcgggggc
aaggcgggcggagggggagagccgctcgacgccgagatgcaggccgacatggacgagttc
ctcgacgagtgttttaacgagggcagcgcggacgcgttcagccaggtggtgtacatgttc
atgtcggagggcgtcccgctgcacgcggcgcactcccgctgcggccgcaccgcgctcatg
gccgccgccgcgcgcggactcaccgccgccgccgcgcagctcctcgccataggcgcggac
ccgctcgccaaagacaaggccggcaagacggcgcacgaccacgcggcggagaacgggcac
gccgagtgcgccgcgctgctggcggcgtcgcggcccgccgccccgcccgcgaccgacgcc
gccgccgacgacttcctgctggacgtgtacacccacgccacgccgcccgacctcgtcgac
cacgacctgctgctcgcgctcgtgcgccacctgcacctcaacatgccgcgcggcagcatc
ctcgtcttcctgcccggctacgacgacatcgtggcgctgcgcgacgccgtgcaggcctgc
gccgacatgagcgccgtcaagtaccagacgttcacgctgcacagcaacatgcagacgctc
gaccagaagaaggtgttcgggccgctgccgggcgcgcgcaagatcatcatcagcaccaac
atcgcggagacgtccatcaccatcgacgacgtggtgtacgtggtggactcgtgccgggtg
aaggagaagtactacgagtccgccggcggcgtgtgctcgctgcagtgcgtgtgggcgtcg
cgggcgtgcgcagcgcagcgggcggggcgcgcgggccgcacgcagcccggccgctgctgg
cacctgtgctcgcgccgccgcttcgccgcgctgccgctcacctccgtgcccgagatcctg
cgcgtgccgctgcaggagttgtgcctgcacactaagctgctggcgcccggcaacacgccc
atcgccgacttcctgtcgcgcgcgctcgagccgccctccttcctcgccgtgcgcaacgca
gtcgcgctgctcaagaccatcggcgcgctcacgcccaccgaggacctcaccgagatcggc
cgccatctgctcgacctcaccgtcgagcccaagctcggcaagatgctgctgtacgcctgc
gtcgtcaagtgcctcgaccccgtgctcactatcgtgtgcagcctcgccaacaaggagccc
ttccagatcggcggcgggggcagcgccggcgccggacacgtcgcgagacgcgagttcgct
gccgacagccactccgaccacatggcgctgctgcgggcctttcaggcgtggcagagcgcg
cgcgccgccggcaccgagcgggccttctgcgcgcgcaacctcatctgcggcgcgaccatg
gagaccgtggtcggccaccgcgcccagctgctggcgcagctccgcgccataggcctggtg
aaggcgcgcggcccgggcgacatcaaggacgtcaacctcaactccgagaagtggcccgtc
gtgaaggcggtgctcgtaagtggcctctacccctccgtcgcgagggtcgaccgcgactcc
ggcaccctgcggacgtctaaggaggtccgcgtgcgcttccaccccaagtcgatcctgcag
acggcgcgcggcgcggggccccagacgctgcccaccgactgggtggtgttcgaggagatc
tcgcgcgtggggcgcttctgcttcatccgcacgtgcacgctggtgacgccgctgacggtg
gcgctgttcggcggcccgctgcggctcgggccgggcgcgctcactcagcgcgccaacccg
cccggcctgtcctcggactcggacagcgaggcggaggcgcccgccgcgcccgacgccgcg
gtgcttgcgctcgacgactggaccgccttcgccgcggacgcgagcgacgcgctcagcgtg
tactacctgcgccagaagctgtgcgcgctggtcgttcggcgcatggccaatcccgccaag
cctcccacgccgctggacgagcagatcctcggcacggtagtggcggtgctcggtgctgag
gagcgcaacgccggcctgcagcagcccgccggtatcggccagcgcccccgtccgctcacg
gtcgacgcggcgggctggcgcgcgcgacccgacgaccaccccgacgacttcggcggcccc
ccccaccccggcccgtacggtgcgccacggccctcctggcgcgcggaggcgcccccacgg
ggctactcgccgcagccgtacggcggacccgggagccccggctcgcccaacggccggacc
ctcctggctaacatcgagaagtacgcgaggaacggcgacgtcggcgtgcgatacttcgtc
gcccgcgcggacgacgcgcccggcgcggaggcggcgcctaccggcaccggaccggcgctc
cccttctcgcaggccttcgccagaaagctgcagaagctcaagcaggaggggcagcgcgcg
atcgtgttcgtgtcgagcgcgggcgccggcaagttcgtgggcgcggcggcggcaggcgac
ggcggcgtggagtggctgagcacggcgcacgtgcccttcggcgccgtgcggcacgtcacc
aacgcgctggcgggcggcgcgcgcgcggtggacgctcgcgacggcgccgagctgtgcgcg
cactccggccgcgcgctgctgcgggccttccacaagcccggcctcgcgccgtccgcgccg
cgtcgccgcccgccgcgcccgcactag
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