Aricia agestis (brown argus): 121739115
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Entry
121739115 CDS
T09904
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121739115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aage03041
]
121739115
Enzymes [BR:
aage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121739115
Spliceosome [BR:
aage03041
]
Complex C
Other components
Step II factors
121739115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
AAA_30
T2SSE
SRP54
Flavi_DEAD
Microtub_bd
Sigma54_activat
Sigma54_activ_2
TsaE
ABC_tran
cobW
PhoH
ATPase
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
121739115
NCBI-ProteinID:
XP_041987375
LinkDB
All DBs
Position
Z:1989268..2099805
Genome browser
AA seq
1194 aa
AA seq
DB search
MADDDANLHRLEGTSGDAPGGLIIKKKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQ
NDENETEENEEESDSNTVKGRKYRRHNEETPTYTGGLSEQARERMLERLQKKEKEREKGV
HNSTLEEKKSRSKEEEDDRYYRRFDRRDRDRDRRRDYDRRDKDRHRSDKERHRREDRRRD
SERSDRSHSERDSSRRSYYEPRFKDEPRTPSIKALKPTDKTAWDDDDDDPKAVRKSSWDF
PTPIPRDGKDSDRSYRSDRRPRDYKGKLYEDTPRASQHRWASSRRGVDIDDPEWQEAEKK
LDREWYNMGEGEADESDPFAGASAEYIAKKEEQIEKRRNRKVSAARQQIDKDNELWERNR
MLTSGVVHAISGIGDLDEESVDRVHLLVHNIVPPFLDGRIVFTKQPEPVIPVKDPTSDMA
VNARKGSALVKAFREQKERRKAQKKHWKLEGTKIGNIMGVQKETEEIEDGPTKQAYKYAE
HLDKEGEKEPKSKSDFVNKMTISEQRRFLPVFAVREELMQVIRENNVIIIVGETGSGKTT
QLTQYLHEEGYTKLGTVGCTQPRRVAAMSVAKRVADEMGVKLGEEVGYAIRFEDCTSPNT
VIKYMTDGILLREGLREPDLDNYCAIIMDEAHERSLSTDMLFGLLREVVARRADLKLIVT
SATMDSTKFSSFFGNVPTFTIPGRTFPVETFYSKNVCEDYVDGAVKQALQIHLQPDEGDI
LIFMPGQEDIEVTCEILTERLADLDAAPPLTVLPIYSQLPADLQAKIFQRAPPGQRKCIV
ATNIAETSLTVDGIMYVIDCGYCKLKVYNPRIGMDALQIYPVSQANARQRAGRAGRTGPG
KAFCLYTQRQYQQELLPATVPEIQRTNLANTVLLLKSLGVEDLLAFHFMDPPPQDTILNS
MYQLWILGALDGTGALTPLGRQMAEFPLDPPQCHMLIVSAEMGCSAEVLIIVSMLSVPSV
WYRPQGREEDADSAREKFQVPESDHLTLLHLYNQWKSNNYSGSWCTEHFVHAKAMRKVRE
VRQQLKDILAQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGLGEYVNCRTGMPCHLHP
TSALFGMGSSPDFVIYHELMMTSREYMHCVTAVDGRWLAELGPMFFSVKETGKSNRDKRK
EAAVHLQKMEEEMKVAEQKMAEERKKREEDVPVKQEVATPGLNTPRRTPQRLGL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacgatgcgaacttgcatcgtctcgagggcacatcgggcgatgctccaggc
ggcttaatcatcaaaaagaaggataagccagcggattttcaatttgcaaagccttcctta
ctcggtctggacaaactagcagctgctaagaggaaacaaaatcgccttatatcctttcaa
aatgatgaaaatgagactgaagagaatgaagaagaaagtgactcaaatacagtcaaggga
cgaaaatatagacgtcacaatgaagaaacaccaacgtataccggcggtctatcagaacaa
gccagagaacgcatgttggagaggcttcaaaaaaaagagaaagaaagagagaagggtgtg
cacaattccacactagaagagaaaaagtctcgttctaaggaagaagaagatgatagatat
tataggcgctttgatagacgtgacagagatagggacagaagacgggattatgataggaga
gataaggataggcacaggagtgacaaggaaagacatagaagggaggacaggaggagagat
tctgaaagaagtgacagaagccattccgagagagacagttccagaagaagttattatgaa
cccagattcaaagatgaaccaagaactccaagtattaaagctttgaaaccaactgacaag
acagcttgggatgatgatgatgatgatccaaaagcagttaggaagtccagttgggacttt
ccaacccctattcctcgagatgggaaagacagtgatcgctcctacagaagtgaccggcgt
ccacgagactataaaggaaaactgtatgaagacacaccaagagcttcacagcatagatgg
gctagttctcgccgaggtgtggacattgatgatcctgagtggcaggaggccgagaagaaa
ttagacagggagtggtataacatgggagaaggtgaggcagacgaatctgatcctttcgcc
ggcgcgagcgcagaatacatcgccaagaaggaggaacagattgaaaagcgaaggaaccgc
aaggtgtccgccgcgagacagcagatagacaaggacaacgaattgtgggagcgaaacaga
atgcttaccagtggtgtggtacacgctataagcggaatcggagatttagatgaagagagc
gtagaccgagtacatcttttagttcacaacatagtgccgccattcctggatgggagaata
gtgtttacaaagcagcccgagcctgttataccggtgaaagacccaacatcagacatggct
gtcaacgctcggaagggctcagctctggtgaaggcgttcagagaacagaaagaaagaaga
aaggcgcaaaagaaacattggaagttggagggaactaaaatcggtaacataatgggtgta
cagaaggagacagaggaaatcgaggacgggccgaccaaacaggcgtacaagtatgccgaa
catttggacaaagaaggtgaaaaagaaccgaaatctaaatctgacttcgtgaacaagatg
actatcagcgagcagcgaagattcctaccggtgtttgccgtgagagaggagctgatgcaa
gttataagggagaacaatgttatcattattgtcggtgagaccggcagcggcaaaactacg
cagctcacacaatatctacacgaggagggttacactaaactcggtactgtgggctgcacg
cagccgcgtcgcgtcgccgccatgtccgtggccaagcgcgtcgctgacgagatgggcgtt
aaactaggggaagaagtcggctacgcgatccgtttcgaggactgcacttcccccaacacg
gtgatcaagtatatgacagacggtatcttactccgcgaaggtctgcgagagccagacctc
gacaactactgcgctatcatcatggacgaagcccacgagaggtcactttctacggacatg
ctgtttgggctcttgagagaggtggtagcccggcgagcggacctcaagctcatcgtgacg
tcagcgacgatggactctaccaagttctcgtcgttcttcggcaacgtgcccaccttcacc
atccccggccgcaccttccccgtcgagaccttctactccaagaacgtgtgcgaggactac
gtggacggcgccgtcaagcaggctcttcagatccacttgcagccagacgagggagacatc
ctcattttcatgccgggacaggaggacatcgaggtcacctgtgagatactgacagagcgt
ctggcggacctggatgcggcgccgccgctcaccgtgctgccgatatactcgcagctgccc
gccgacctgcaggccaagatattccagcgcgcgccgcccggccagcgcaagtgtatcgtc
gccaccaacatcgccgaaacatctttgactgtggacggcataatgtacgtgatcgactgc
ggctactgcaagctcaaggtgtacaacccgaggataggcatggacgctctacagatctac
cccgtcagccaggccaacgcccgtcagcgggccgggcgtgcgggccgcacgggacctggc
aaggccttttgtctgtacacacagcggcagtaccagcaggaactgctccccgcgaccgtg
cccgagatacagagaaccaacttggctaatacagtcctgctgctgaagagtttgggtgtt
gaagatcttctggccttccatttcatggatccaccacctcaggacacgatcctaaactcc
atgtatcagctgtggattctcggcgcgctagacggcaccggagccctaacgccgctgggc
agacagatggcggagttccccctcgacccgccgcagtgccacatgctgatcgtgtccgcg
gagatgggctgcagcgccgaagtgctcatcatcgtgtcaatgctgtcggtgccgtcagtg
tggtaccggccgcaggggcgcgaggaggacgcggactcggcgcgcgagaagttccaggtg
ccggagagcgatcacctcaccctgctgcacctgtacaaccagtggaagtccaacaattat
tccggttcctggtgcacggagcacttcgtccacgcgaaggcgatgcgcaaggtgcgcgag
gtgcgccagcagttgaaggacatcctggcgcagcagcgcctgccgctcgtctcctgtggg
acggactgggacaccgtgcggaagtgtatctgttcagcgtacttccagcaagccgctcgt
ctcaagggtctcggagaatacgtgaactgccgaaccggtatgccgtgccacctccatccc
acatcagctctcttcggcatgggcagttccccggacttcgtgatataccacgagctgatg
atgactagcagagagtatatgcactgcgtgacggcggtcgatgggagatggttggcggaa
ctgggacctatgttcttctcggtcaaggagactggcaaatccaaccgcgataaacgaaaa
gaagcagccgtccatctacagaagatggaagaagagatgaaagtagcggaacagaagatg
gcagaagagagaaagaagagggaagaagacgtgccagtgaagcaagaagtagccacaccg
ggacttaacacaccgcgccgcacgccgcagcgattgggcctgtga
DBGET
integrated database retrieval system
