Aricia agestis (brown argus): 121740395
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Entry
121740395 CDS
T09904
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
aage
Aricia agestis (brown argus)
Pathway
aage04512
ECM-receptor interaction
aage04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121740395
04518 Integrin signaling
121740395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aage00536
]
121740395
Glycosaminoglycan binding proteins [BR:
aage00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121740395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
FnI_RECK
VWC2L_2nd
NELL_VWC_C
CFC
PSP94
Motif
Other DBs
NCBI-GeneID:
121740395
NCBI-ProteinID:
XP_041989011
LinkDB
All DBs
Position
3:2888469..2899442
Genome browser
AA seq
1482 aa
AA seq
DB search
MWLGTAVVALLVLPALGKEVREELPQAQDPDLVNYDDYNPLDEDLNAIISDSDFRGPSAT
SRALPTIPTRAPPRRCIDIGQSWSDGETWKRDNCTLCQCYAGRVNCSVIPACLTGRATSP
GYHSASSGITPVRGVSGPQGENGPPGPPGMPGASGVPGAPGMPGNIGPMPDVNAYLAQLA
ASAGGDKGPPFDPYQYMQASVGSPGIRGIPGPQGPPGPQGFQGPRGEPGEPGLPGPLGPP
GERGPQGPPGKDGSPGEDGEPGPAGAAGQPGPRGTPGVPGIQGLKGHRGFDGKDGAKGEQ
GVAGEKGPTGLPGQMGPPGPIGPTGPRGERGREGPPGSPGMRGADGAPGAPGLVGNVGKP
GSPGFPGAPGIKGEQGIAGPKGSQGMQGPRGEPGRPGQSGEAGAPGLAGRDGIPGEKGVQ
GQPGVAGTPGFPGPRGTPGVAGDPGIPGTKGMPGQPGERGLKGESGVRGEQGIPGPRGLP
GNMGPEGKRGKRGLRGPAGNVGPQGERGLQGMRGLPGADGPMGAKGQPGERGSVGLPGAK
GSTGDVGRAGPQGIPGPRGMIGRPGIAGKSGPPGERGIPGADGRPGEQGPQGLQGPPGLM
GPVGERGLQGESGKDGEIGQPGPTGPKGDPGRDGSPGIQGPQGPIGAAGERGPVGPTGPT
GFPGMPGAAGLPGTPGKEGEPGVTGPVGPPGQAGPRGERGFPGDRGVPGQPGTPGEKGEA
GAQGADGPPGPEGARGAKGHPGQIGAMGMPGLRGMPGVAGEKGERGSMGLQGPEGPPGRQ
GEQGPQGPIGPTGPPGEPAERGEPGAPGTPGEPGAPGSTGERGHPGLQGSPGLPGQPGLT
GMPGLKGDRGYAGAKGQQGSTGHPGIPGEPGLRGLPGANGAKGARGEQGLKGDAGHPGLP
GRPGELGPPGQQGSPGAAGIPGIPGAKGATGDSGRPGAPGPQGLTGPPGPEGAKGERGSE
GELGPQGPPGPAGPTGERGPSGLPGMVGPPGPQGLRGIQGETGVPGKPGVDGPPGPMGSA
GVQGPPGPMGEPGPEGRPGKLGQPGIPGRPGDKGPTGQPGQSGPPGAPGLQGPSGPSGPP
GPAGERGPRGESGPPGVDGPQGPTGKQGPPGLDGSKGERGEAGANGAKGHAGLPGLPGMV
GAPGRQGERGLPGAMGPPGKDGDAGPRGPAGRDGSAGPPGPVGPVGGRGPPGEPGRHGPP
GSAGPPGPPGPPGDSLQYDAAAIAAMLQQGSIKGPDPLGDDPNAIPPRFFKDDMSPEERK
KIVLKAYERLKVSLDKFLKPDGSKEAPAKTCGDIKYHHPDFPSGQYWIDPNGGDFSDAIL
VHCDMAAGASCVYPAPTTSADITRIGSGEAWLSELDDGFTISYKAEHSQLTYLQLLSVSA
VQNVTLHCRNTVGYYDPAARNYKRGLKLLAFNDAEILPKANNRLRYKALLDECQYKKSEW
ARTVVEYETDRPTRLPLLDVAVRDTGRPGQTFRVELGLACFT
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgggcaccgccgtcgtggcgctgctggtgctgccggcgctgggcaaggaggtg
cgggaggagttgccgcaggcgcaggacccggacctcgtcaactacgacgactacaacccc
ctcgacgaggatctgaatgcgatcatttctgacagtgacttccgagggccaagtgcgaca
tccagggcactaccaactataccgaccagagctccaccccgacgatgcatcgacatcggt
cagtcgtggtcggacggggagacgtggaagcgagacaactgcacgctctgtcagtgctac
gccggacgagtcaactgctccgtgatacccgcttgtctcacaggtagagctacgtctccg
ggataccacagcgcgtcgtccgggatcacccctgtgagaggagtatctggcccgcaggga
gagaacggtcctccaggaccaccggggatgcccggggccagcggggtgcccggggcgccg
ggcatgcccggaaatattggtcctatgcctgatgtgaacgcgtatttggctcaactggct
gcgagtgctggaggcgacaagggtccgcccttcgacccctaccagtacatgcaagcgtcc
gtcggcagccctggcattagaggaatacctggaccacaaggaccacctggtcctcagggt
ttccagggaccacgcggcgagcctggagaacctggtctccctggacctttaggcccaccc
ggcgaaagaggaccacaaggaccccctggaaaagatggttctccgggagaagacggtgag
ccgggcccagcaggagcagcagggcagccggggcccaggggaacccccggggtgcccggg
atacaggggctgaagggccatcgagggttcgacggcaaagacggtgccaagggcgaacag
ggcgtcgccggcgagaagggccctaccgggttacctggacagatggggccacccggtcct
attggccctactggtcctcgtggtgaaagaggacgagaaggaccaccagggtcaccggga
atgcgtggagctgatggagcaccaggagcacctggacttgtcggtaacgtcggaaagcca
ggttctcccggatttccgggcgcaccgggtataaaaggcgaacaaggtatagcaggtccc
aaaggcagtcaaggaatgcagggtccccgaggcgagccaggccgtccaggacaatccggt
gaagctggtgcgccagggttggcgggacgtgatggtatacccggagagaagggcgtgcaa
ggtcagccgggagtggcaggcacccccggctttcccggaccacgcggaacacccggagtt
gctggtgatcctggtataccaggaacaaagggaatgccgggacaaccaggcgaaagagga
ctgaaaggagaatctggtgtaagaggtgaacagggtatacctgggccgagaggtttgcct
ggaaacatgggtccagagggcaaacgaggcaaaagagggttgagaggccctgctggtaac
gtaggcccccaaggagagaggggattacagggtatgcggggcttaccgggagccgatggg
cctatgggtgcaaaaggacagcccggcgaacggggaagtgttgggttacctggagccaag
ggaagtaccggagacgttggcagagccggtcctcaaggaattccagggccccggggaatg
ataggtagaccaggtatcgcgggcaaatctgggcctcccggtgagaggggcatacctgga
gctgatggaaggcctggtgaacaaggcccgcaaggattacagggaccacctggtctaatg
ggtccggttggcgagagaggactacaaggtgaatctggcaaagatggagaaatcggacag
cccggacctacaggtcctaaaggagacccaggtagagatggtagcccgggaatacaagga
ccacaggggcctatcggtgccgctggagaaagaggacctgtaggaccaactggaccaaca
ggatttccgggcatgccaggtgctgcaggattaccgggtaccccaggaaaggagggagaa
ccaggtgttactggaccagtcggtcctccaggacaagccggacccaggggtgaaagaggg
tttcccggggacagaggagtgcccggacagccaggtactccaggagaaaagggtgaagca
ggagctcaaggtgctgatggtccacccggtcccgaaggcgcaaggggcgccaaaggccat
cctggtcagatcggtgctatgggtatgcctggtctacgtggtatgcccggcgttgctgga
gaaaaaggagaacgcggatcaatgggattacaaggccctgagggacctccaggtcgacaa
ggggagcaaggaccacaaggaccaattggtccgactggtcctccaggggagccagcggag
cgaggtgaaccgggcgccccagggacacccggagaaccaggtgctcctggctcgactggg
gagcgcggtcatcccggattacaaggctcgcctggcctcccgggtcagccaggcctgact
ggaatgcctggactgaagggcgacagaggctacgctggagcaaagggacagcaaggatca
actggacatccaggcattcctggggagcctggattgcggggattgccaggagctaatgga
gctaagggtgcgagaggcgaacagggactgaagggcgacgcaggtcaccctggactaccg
ggacgaccgggtgaattaggaccacctggtcaacaaggaagcccaggtgctgctggtata
ccagggataccaggtgctaagggagcaacaggggactcgggacggcctggcgcaccggga
ccacaagggttaactggccctcctggtcctgagggagctaagggcgagagaggaagtgag
ggtgaattaggaccacaaggaccgcccgggccggccggaccaactggagaacgaggaccg
agtggcttgcccggtatggttggcccgccaggaccacagggtctgcgtggtatacagggc
gaaactggtgtaccaggtaaacccggtgtcgatggtccaccagggcccatgggaagcgca
ggagtgcaaggaccaccaggacctatgggtgagccgggccctgagggaagaccagggaag
ttggggcagcctggtattcctggacgacccggggacaaaggacctactggccaacctgga
cagtctggtccaccgggagcgcctggcttacagggtccatctggtccctcgggaccacca
ggcccggctggagaaagggggccaagaggtgagagtggtccacctggggtcgacggtcct
caaggaccaacgggcaaacaagggccacctggcctcgacgggtctaaaggagaacgaggg
gaggccggggcaaatggggctaagggtcacgccgggctgccgggactaccggggatggtg
ggggcgccgggtcgccagggagaaagaggtttacctggagctatgggacctccggggaaa
gacggcgacgcgggaccgcggggaccagccggccgggacggcagcgcaggtccgccaggc
cccgtcggaccggtgggcggtcgcggcccgccaggagagccgggccgacacggacccccc
ggatccgccggtccgcccggaccacccggcccaccaggagactcgcttcagtacgatgcc
gctgctattgctgctatgctacaacaaggttcaataaaaggtccggacccactaggcgac
gatccaaacgcgattccgccgaggttcttcaaggacgatatgtcgccagaggagaggaag
aagatcgtgttgaaggcgtacgagcgactgaaggtctccctggacaagttcctgaagccc
gacggcagtaaggaggccccggcgaagacgtgtggcgatatcaagtaccaccatcctgac
ttccccagtggtcagtactggatcgacccgaacggcggcgacttcagcgacgcgatcctg
gtgcactgcgacatggcggccggcgccagctgcgtgtaccccgcgcccaccacgtccgcc
gacatcacccgcatcggcagcggcgaggcctggctcagcgagctggacgacggcttcacg
atctcatacaaagccgagcacagccagctgacttacctccagcttctctcggtgtcagcg
gtacagaacgtgacgttacactgtcgcaataccgtgggctactatgacccggcagcacgc
aactacaagcgagggctgaaactgctggccttcaatgacgccgagatcctgcccaaagcg
aacaaccggctacgatacaaggcgttactggatgagtgccagtacaagaagtcggagtgg
gcgcggacggtggtggagtacgagacggaccggccgacgcggctgccgctactggacgtg
gcggtgcgcgacaccggcagaccgggacagaccttccgcgtggagctgggcctggcctgc
ttcacatag
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