Anatilimnocola aggregata: ETAA8_04670
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Entry
ETAA8_04670 CDS
T07027
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03030
DNA replication
aagg03430
Mismatch repair
aagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETAA8_04670 (dnaE)
03430 Mismatch repair
ETAA8_04670 (dnaE)
03440 Homologous recombination
ETAA8_04670 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aagg03032
]
ETAA8_04670 (dnaE)
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_04670 (dnaE)
Enzymes [BR:
aagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETAA8_04670 (dnaE)
DNA replication proteins [BR:
aagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETAA8_04670 (dnaE)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETAA8_04670 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHP_C
Motif
Other DBs
NCBI-ProteinID:
QDU25399
UniProt:
A0A517Y582
LinkDB
All DBs
Position
complement(610960..614547)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSRSFVHLHCHSHYSLLDGASPIPKLIQRAKDHGMNSLALTDHGNLHGALEFYNKAKAKG
INPILGYEAYIAPGSRFDKKDASNSKEASYHLTLLAQNRVGFKNLIKLASAAMLEGFYYK
PRIDKEILAAHSEGIICLSGCVSSEFSNAILRGGDGDDAFKAAMETAAWFSKLFGDRYFI
EIMNNGVDIQRIQLEGAVDIAKRMGLPLVATSDAHYVDREDAEAQDVMLCVNTGRFRTDT
NRMKMENDSFYLRSPEEMYQHFPGLEDAVARSQEIANSVCIDLELGKRHFPVYALPEGRS
TSEYLRELCITGLKDRYSDDPEMLKDDVLADVVIARLDRELDVINKLGFPNYFLIVWDFV
REARDKGIPATARGSGVGALVCFALYLSHVCPIKYDLLFERFLDLNRKEAPDIDIDFCKE
RRGLIINYVKEKYGEANVAQIGTFGTLQARAAIKDVGRVLGIPVERVNKLTSLVPDQLHI
SLDEAIEQAEELKHLYQTDAEIREVLNLARKIEGLARNIGTHAAAVVIADKPLTEYVPLG
KVSGKNDIITQWSMGDVEAAGLLKMDFLGLRNLTILSKAEDIILQTTGKRINPYKFPLDD
KKTFALLQRGETKGIFQLESGGIRDLLQKMKPDHFRDIIATNALYRPGPLEGGMVRDYVE
VKNGRQAASYIHPVCEKILSETHGVMVYQEQVMRILSELGGIELASSYTCIKAISKKKEE
LIAKNKDQFLIGCGEKGLSKNEAEDFWNMIIKFAGYGFNKSHSTAYALIAYMTAYLKAHY
PVEFMAALLSGDIEGRNFKTKDALVEHLEDCARMNIEVVPPCVNHSDVDFAVSGDKIHFG
LSAIRGCGGSAGEAIVTARKKGGPFRDLFDFCERVDSSGSSKGVIETLIKAGAFDGFKVK
RSQLYAIIERAIQAGQSVASDRKSGQKSLFGAFAEESDSKPVVTMPDLPEQQPKEMAQAE
KEVLGFYLSSHPLDEYKHKLAMYRSHSVTGAKSVPERQEVILGGMLGALKFSSTKNPQPG
KPSRYVMFDLEDDESNNIRCILWPDGFVDYGHLVQADAILMVRGSIDRRGGEEANLIVNE
LSTLADIDERSTSGIEIRFDERQHGPETIKKAYEIVRGYPATGEKPGQLKMQIVTEDRTI
VELKVAKARLNITKELEARLHDLLGPGHLRLLKNPPKPSADRPPPRRQFQKAGAR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttctttcgtgcatttgcattgccactcgcattacagcttgctcgatggtgcc
tcgcccattcccaagctgattcagcgggcgaaggaccatgggatgaactccctggcgctg
accgatcacggcaatctgcacggcgcgttggagttttataacaaggcgaaggccaagggg
atcaacccgatcctcggttacgaagcctatattgcgccgggcagtcgcttcgataagaag
gacgcttcgaacagcaaggaagccagttatcacctgacgctgctcgcgcagaatcgagtc
ggcttcaagaatctgatcaagcttgcctcggccgcgatgctcgaaggcttttattacaag
ccacgcatcgacaaagaaatcctcgctgcacatagcgaagggatcatctgcctcagcgga
tgtgtttccagcgagttcagcaacgcgatcttgcgcggtggcgacggcgacgatgccttc
aaagccgccatggaaaccgctgcctggttcagcaagctgtttggcgatcgctacttcatc
gagatcatgaacaacggcgtcgacatccaacgcattcagctggaaggggccgtcgacatt
gccaagcgaatgggcttgccgcttgtcgccacgagtgatgcgcactacgtcgatcgcgaa
gatgccgaagcgcaagacgtgatgctgtgcgtgaacaccggtcggttccgtaccgacact
aaccggatgaagatggagaacgattcgttctacctccgttcgccggaagagatgtaccag
cattttcctgggctcgaagatgcggtggcacggagccaggagattgcgaattcggtttgc
atcgacctggaactcggcaagcggcacttccccgtgtatgccttgcccgaaggtcgctcg
acatctgaatatttgcgcgagctgtgcatcaccggcctcaaagatcgttactccgacgat
ccggagatgctcaaggacgatgtgctggccgacgtggtgatcgcgcggctcgatcgtgaa
ctcgatgtgatcaacaagctgggctttcccaactactttctcatcgtttgggacttcgta
cgcgaagctcgcgacaagggaattcccgcgacggcgagaggtagcggtgtcggcgcgctc
gtctgcttcgcgctctacttgagccacgtttgcccgatcaaatatgacctgctgttcgag
cggttcctcgacctgaatcgcaaggaagcgcccgatatcgacatcgacttctgcaaggaa
cgtcgcgggctcatcatcaactatgtgaaggaaaagtacggcgaggcgaacgtcgcacaa
atcggcaccttcggtacgctccaagctcgtgcggcgatcaaggacgtgggccgcgtactg
ggaattccggtcgagcgcgtgaataaactcacgagtctcgtacccgatcaattgcacatt
tcgctggacgaagcgattgagcaggccgaagaactgaagcatctctatcaaaccgatgct
gaaattcgcgaagtgttgaacttggctcgcaagatcgaagggctcgcgcggaacatcggc
acgcatgcggccgcagtcgtgatcgccgacaagccgctgaccgagtacgtgccgctcggt
aaggtgagcggtaagaacgacatcatcacgcagtggtcgatgggcgatgtcgaagctgct
ggcctgctgaagatggactttctcggcctccgcaacttgacgatcctcagcaaagcggaa
gacatcattctgcagacgacgggcaagcgaattaacccgtacaagtttccgctcgacgat
aagaaaaccttcgccctgctgcaacgcggcgaaacgaagggcattttccagctggaatcg
ggcggtattcgcgacctgctgcagaagatgaaacccgatcacttccgcgacatcatcgcc
acgaacgcgctctatcgtcctggtccgctcgaagggggcatggtccgcgactacgtcgaa
gtgaagaacggccgtcaggctgccagttacatccatcccgtgtgcgagaagatcctctcg
gaaacgcacggcgtgatggtgtatcaagagcaggtgatgcggatcctgagcgaactgggc
ggcattgaactcgccagttcgtacacgtgcatcaaggcgatcagcaaaaagaaggaagag
ctgattgccaagaacaaagaccagttcctcatcggctgcggtgagaagggcctctcgaaa
aacgaggccgaagacttctggaacatgatcatcaagttcgcgggctacggcttcaataag
agccactcgaccgcttacgcgctgatcgcctacatgacggcgtatctcaaggcgcactat
ccggtcgagttcatggcagcacttctcagtggtgatatcgaagggcgtaactttaaaacg
aaggacgcgctcgtcgaacacttggaagattgcgcgcggatgaatattgaggtggtgcct
ccgtgcgtcaatcacagcgacgtcgatttcgctgtttctggcgacaagattcactttggg
ctttctgcaatccggggttgcggcggtagtgcgggtgaagcgattgttaccgcgcgcaag
aaaggcggtccattccgcgatttgttcgatttttgcgaacgagtcgactcttccggttca
agcaagggagtgatcgaaactctgatcaaggctggtgccttcgatggctttaaggtgaag
cgctcacagttgtatgcgattattgagcgggcgattcaagcgggacagagcgttgcctca
gatcgcaagagcgggcagaagtcgctgttcggcgcattcgctgaagagtctgactcgaag
cccgttgtcaccatgcccgatctgccggagcagcagccgaaggagatggctcaggccgaa
aaagaagtgctcgggttttatttatcttcgcatccgctcgacgaatacaagcacaaactg
gccatgtatcgttcacattccgttaccggggcgaagagcgtgcccgaacggcaggaagtg
atcttgggcggcatgctcggtgccctgaagttcagcagcacgaagaacccgcagcccggt
aagccttcgcgctatgtaatgttcgacctcgaagatgacgagtcgaacaacatccgttgc
atcctgtggcccgatggctttgtcgactacggtcatctagtgcaagccgacgcgatcctg
atggttcgcggcagtatcgatcgccgcggcggcgaagaagcgaacctgatcgtcaacgaa
ctaagcacgctcgccgatatcgacgagcggagcacttccgggatcgagattcgtttcgac
gaacggcagcacggtcccgagacgatcaaaaaggcgtacgagatcgttcgtggctatcca
gcgacaggtgagaaacccggtcaattgaaaatgcagatcgtcaccgaagaccgcaccatc
gttgaattgaaagtggccaaggctcggctaaacatcactaaagaactggaagctcgcttg
cacgacttacttggtcccggtcaccttcggctgctgaagaatcctcccaagccatctgca
gatcgtccgcccccacgacggcagtttcagaaagctggcgcgaggtag
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integrated database retrieval system
