Anatilimnocola aggregata: ETAA8_09340
Help
Entry
ETAA8_09340 CDS
T07027
Symbol
recD2_1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ETAA8_09340 (recD2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_09340 (recD2_1)
Enzymes [BR:
aagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ETAA8_09340 (recD2_1)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAA8_09340 (recD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_16
nSTAND3
PIF1
NPHP3_N
AAA_22
AAA_28
NTPase_1
DEAD
RsgA_GTPase
AAA
TsaE
AAA_5
Herpes_Helicase
T2SSE
MeaB
RuvB_N
ATP_bind_1
NACHT
Helicase_RecD
TrwB_AAD_bind
NB-ARC
ATPase_2
KTI12
ABC_tran
AAA_14
AAA_29
MoCF_biosynth
cobW
UvrD-helicase
Zeta_toxin
AAA_18
Rad17
Motif
Other DBs
NCBI-ProteinID:
QDU25862
UniProt:
A0A517Y6V1
LinkDB
All DBs
Position
1161020..1163185
Genome browser
AA seq
721 aa
AA seq
DB search
MSETLKGIIERVSFHNPDNGFAVLRVKVKGRDDLVSVVGSTMSVTAGEHFEATGHWVIDR
EHGQQFKADELKTTHPASAEGIEKYLASGAIRSIGPKIAAKIVSIYKERTLEIFEQAPDF
LLHVKGIGAERLKRISKSWDEQKEVRKITLFLTEHGITSGRAVRIYRTYGHESIAKIKEN
PYQLADDIRGIGFKTADELAATLGIDRNSPYRARAAVRYTLQELASQGHCGYPEPGVMEH
AKKLVEIEQKIIADAVRSVVHDGSVIREPVEGEPWLYLANLHRSEVGLAQSVHRIASATP
HPLPRFDVEKAIAWVEQRLNIQLAAAQQEAIRQACQQKLLVITGGPGVGKTTLVRSILEI
FSAKEMNCVLAAPTGRAAKRLAETTGRTAKTIHRLLEFDPATGEFKRNAQHLLTGDLFVL
DETSMVDVVLGHQVLRAIPSEACVILVGDVDQLPSVGPGSVLADLISSNVVPVVRLTEIF
RQATESRIITAAYAINHGQMPNPSKSEELTDFYFIESNEPEGIQDMLVRLVKERIPARFG
FDPKSDIQVLTPMNRSVLGARNLNQVLQKAINPGDGGPEVQRFGWTFRIGDRVIQTVNNY
DRDVFNGDLGIIEQINRIEQVMTINFEGRQVEYDFGDLDELALAYVLSIHKSQGSEFPCI
VIPLHTQHYMMLQRNLLYTAVTRGKKLVVLVGSRKALSMAVRRADSGQRYTALRKRLQAI
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccctgaagggaatcatcgaacgagttagtttccacaacccagacaatggg
tttgcggtgctgcgggtgaaggtcaagggacgtgacgatcttgtttctgtcgtgggcagc
acgatgtccgtaactgcgggcgaacatttcgaggcaaccggtcattgggtgatcgaccga
gagcatgggcagcagttcaaagccgacgaactgaaaacgacgcacccggcatcagcggaa
ggcatcgaaaaatacctcgcatcgggagccattcggagcattgggccaaaaatcgccgcc
aagatcgtttcgatctacaaggagcggacgctggaaatctttgagcaggctcctgatttc
ctgctccatgtgaaaggcattggtgcagaacgcctcaagcgaatcagcaaaagctgggat
gagcagaaagaagttcgcaaaatcaccttgtttctgactgagcatgggatcacgtcaggc
cgagcagtccgcatctaccgcacttacggccatgaatccatagccaaaatcaaagagaat
ccataccaactagccgatgacatccgtggcatcggcttcaagaccgccgatgaactggca
gccactttgggcatcgaccgcaatagcccgtaccgagcgagggcggcggtgcgttacacg
ctgcaagaattggcgagtcagggacattgtggttatccagagccgggtgtgatggaacat
gcaaaaaagctcgtcgaaatcgagcagaagatcatcgctgatgccgtgcggagcgtggtc
catgacggaagcgtgattcgggaacctgttgagggcgagccgtggctatacctcgccaac
ctccaccgatccgaagtcgggctggctcaatcggttcatcggatcgcctcagccacacca
catccgctgccacgatttgatgtcgaaaaagcaatcgcctgggttgaacagcggttgaac
attcaattggccgcagcacagcaagaagcgattcgacaagcatgtcagcaaaaactgctc
gtcatcacgggtggtccaggtgttggcaagacgacgctcgttcgcagcatcctcgaaatc
ttttcggccaaggaaatgaactgcgtgctggcagcgccgacgggccgagcagccaagcgg
ttggcagaaacgactggacgcacggccaagacaattcaccggctccttgagtttgatcca
gccaccggcgagttcaaacgcaacgcacaacacctactgaccggtgacctgttcgtgctg
gatgaaacttcgatggttgatgtcgttctcggtcaccaagtcttgcgagccattcctagc
gaagcctgcgtgatccttgttggcgatgtggaccaacttccctcggttggccctggttcc
gtgctggccgatctgatttcatcgaacgtggttcctgttgtgcgactgaccgagattttt
cggcaagcaactgaaagccgaatcatcaccgccgcctatgcaatcaaccacggtcagatg
ccgaatccgtccaagtccgaggaactcaccgatttctatttcatcgagtcgaacgaacct
gaaggcattcaagatatgttggtgcggctagtgaaagaacgaatcccggcccgctttggc
ttcgacccgaaatccgacatccaagtcctgacgccaatgaatcggtctgtcttgggagcc
aggaacctcaaccaagtgctgcaaaaggcgatcaacccaggcgacggcggacccgaagta
cagcgatttggctggacgtttcgtatcggggaccgagtgattcaaaccgtcaacaactac
gaccgagatgtgttcaacggcgatttgggaatcatcgagcagatcaaccgtatcgagcag
gtaatgacgatcaacttcgaggggcggcaagtcgagtatgatttcggcgatctcgacgaa
ctggccttggcttacgtgctgtcgattcacaagagccagggttcggagttcccctgcatc
gtgattccgctccacacgcagcactacatgatgctgcaacgcaacctgctctacacagcg
gtcaccagaggcaagaagctcgtggtactggtggggtcaagaaaggccctgagcatggcc
gtgcgtcgagcggattccggtcaaagatacacggcgttgaggaagagactgcaagcgatc
aagtag
DBGET
integrated database retrieval system
