Anatilimnocola aggregata: ETAA8_23380
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Entry
ETAA8_23380 CDS
T07027
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aagg
Anatilimnocola aggregata
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aagg03032
]
ETAA8_23380 (topA)
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_23380 (topA)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ETAA8_23380 (topA)
DNA replication proteins [BR:
aagg03032
]
Prokaryotic type
DNA Topoisomerases
ETAA8_23380 (topA)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETAA8_23380 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_Crpt
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDU27251
UniProt:
A0A517YAN1
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All DBs
Position
complement(2958224..2961019)
Genome browser
AA seq
931 aa
AA seq
DB search
MAKRAAGTGKSLVIVESPAKARTISKYLGKDYTVEASIGHIRDLPQGSKEMPEEFKGKKW
SYLGVNVDDGFEPVYIIPGEKKPQVTKLKALMKDASRLYLATDEDREGEAISWHLLEVLK
PKIPVHRLVFHEITEEAILDALEHPRDIDDGLVRAQETRRILDRLYGYEVSQLLWRKVAP
RLSAGRVQSVAVRLIVERERQRMAFRSATYWDLIARFVTEDGKEFDAELVSVGGRKVPTG
KDFDSATGKIKDPNLLLLNEKTVQELAEKLHNEKFAVSSLDDKPYTRKPSEPFTTSTLQQ
EANRKLGFTARRTMNVAQSLYENGYITYMRTDSTNLAQVAIDAARDLVRTEYGPNYVPAE
PRVYKSKVKNAQEAHEAIRPAGHPFKLPESLRNVLTPDQFKIFDLIWKRTIASQMSDARG
RSITLSVAGGDAIFQVTGKTIEFAGFLRAYVEGSDDPEAELADQERLLPSVNIRDPLGCK
QLTEKSHSTQPPARFSEASLTAALEERGIGRPSTYASIIDTILERKYVFKKANALVPTWV
AFSVSRLLEEHLPNLVNYEFTAKMEDLLDSISRKEEDSVAYLQNFYFGNGDAGLKPQLDK
KIIEVDPREMGRFTLGTPTEGEHQEEVFVRVGKFGPFIEQGERKGSIPQDTPPDEMTLER
ALKLLDQAGVGEEPLGICPDTHKPVYLKQGRFGPYVQRGAGDEDEKPKNASLLPGMQPAD
VTFEIALDLLKLPRTLGENPETKEPILAANGRYGPYIKHGSDFRSLPPDISPVTVSLDQA
LAIFAQPKVRGRGRNAPKEPLKTFESSPVTGQPIKVLEGRYGTYISDGVTNATLPKDLSH
EELTLPQALTLLEERAAMGPPKKGRRGAKAAAPKKAATPKAPKAPKAPKAATVKKAAPKK
SAKKAPAAKTATKAAKKATPKNPKPNDDIPF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgtgcggctggaacaggaaaatccctggtaatcgtcgaatctcccgccaag
gcgaggacgatttcgaagtaccttggtaaggactacaccgttgaagccagcattggccat
attcgcgatttaccccagggctcgaaggagatgccggaggagttcaaagggaagaagtgg
tcatacctgggagtgaacgtcgacgacgggtttgagccggtctatatcattcccggagaa
aaaaaaccgcaggtcaccaagctcaaagccttgatgaaagatgcttcgcgtctctatctg
gcgacggacgaagaccgcgaaggagaagccatcagttggcatttgctcgaagtcctcaag
ccgaagattccggtccatcgcctggtctttcacgaaattactgaagaggcgattctcgac
gcgctcgaacatccccgcgacattgacgatgggctggtgcgggcccaagaaacgcgccgc
atcctcgaccgtttgtatggttacgaagtctcgcagttgctgtggcgaaaggtagcgccg
cgtctctctgcaggtcgcgtgcaaagcgtggcggtgcggttgattgtcgaacgcgaacgg
cagcggatggcgtttcgttcggccacgtattgggacttgattgcccgctttgtcaccgaa
gacggcaaagagttcgacgccgaactcgtgtcggtcggcgggcgaaaagttcccaccggc
aaggatttcgactctgccaccggcaagattaaagatccgaacttgctgctgctcaacgaa
aagactgtgcaggagttggccgaaaagctacacaacgaaaagttcgcggtcagctcgctc
gacgacaaaccctacacgcgcaagccctcggaaccgttcaccaccagcacgctgcaacaa
gaggcgaaccgcaaactggggttcaccgcgcggcggacgatgaacgtcgcccagagtttg
tatgaaaacggttacatcacctacatgcgtactgactcgacgaatctggcgcaggtagcc
atcgatgcggcccgcgatctggttcgtactgagtacggaccgaattacgtccccgccgag
ccgcgagtttataagagcaaggtcaagaacgcgcaggaagctcacgaagccattcggcca
gccggtcatccgttcaaactgcccgagtcgctacgcaacgtactcactcccgatcagttc
aaaatcttcgacctgatttggaagcggacaatcgccagccaaatgtccgatgcccgcggt
cgcagcatcactctgtcggtagccggcggagacgcgatttttcaggttaccggcaaaacg
attgaattcgccggcttcttgcgagcctatgtggagggatcggacgatccggaagcggaa
ctcgccgatcaagagcgcctgttgccttcggtgaacattcgcgatccgctgggctgcaaa
cagctgactgaaaagagccactcgacccagccccccgcgcgcttcagcgaagcgtcgctc
accgcggccctcgaagagcgaggcatcggccgcccaagtacgtacgcttcgattatcgat
acgattctcgagcgcaaatacgtcttcaagaaggcaaatgcgctcgtcccaacgtgggtt
gcgttctccgtttcacgcttgctcgaagagcatctgccgaacctggtgaactatgaattc
accgccaagatggaagacctgctcgactcgatcagtcgcaaggaagaagactcggtcgcg
tatctgcagaatttctacttcggcaatggcgatgctggactcaagccccagttggataag
aaaatcatcgaagtcgatccgcgcgagatgggacgcttcaccctcggcacgccaaccgaa
ggggagcatcaggaagaagtctttgtacgagtgggcaagttcggcccctttatcgaacaa
ggcgagcggaagggttcaattcctcaggacacaccacctgacgagatgacgctcgaacga
gcgctcaagctgctcgaccaggctggcgtgggcgaagagccgctcggcatttgtcccgat
acgcataagccggtgtacttaaagcaaggccgcttcggtccttatgtgcaacggggtgct
ggcgatgaagacgagaagccgaagaatgcgtcgctgctgccgggcatgcaaccggccgat
gtgacgttcgagatcgcactcgacctgctcaagttgccgcgcacgctgggtgaaaatcca
gaaacgaaagagccgatcctggccgccaacggccgctatggtccttacatcaagcacggc
tccgatttccgctcgttgccgccggacatttcgccagtgacggtctcgctcgatcaagcc
ctagcgatctttgcccagcccaaggtccgcggacggggtcgcaatgcccccaaggagccg
ctcaagacgttcgaatcatcaccagtcaccggccaacctatcaaggtgctagaaggccgc
tacggcacttatatcagcgacggcgtgaccaacgccacgcttcccaaagatctctcgcac
gaagagttgacgctgccccaagccctgaccttgctcgaagagcgggccgcgatgggaccg
cccaagaaggggcgacgtggtgccaaagcagcagcacccaagaaggccgcgactccgaaa
gcgcccaaagctccaaaagcccctaaggcggcaacagttaagaaggcagctccgaaaaag
agcgctaagaaggctcccgctgccaagacggcgaccaaagctgccaaaaaggccaccccc
aagaatcccaaacccaacgacgacattccgttttaa
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