Anatilimnocola aggregata: ETAA8_24940
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Entry
ETAA8_24940 CDS
T07027
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aagg
Anatilimnocola aggregata
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aagg03016
]
ETAA8_24940
Enzymes [BR:
aagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ETAA8_24940
Transfer RNA biogenesis [BR:
aagg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ETAA8_24940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QDU27407
UniProt:
A0A517YAY6
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All DBs
Position
complement(3162411..3162989)
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AA seq
192 aa
AA seq
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MQRIRSFIAVELASSVTKRAKQLIEKLKTEGVDVNWVQPTQMHLTLKFLGNVADSEIPDI
CKVVAQATAEVEPFEIICRGLGGFPSSAEARTLWIGLEQGNDELRELQAAIDTALSNQLG
FAKEQRGFTPHLTIGRVKGGTPEGMAAIATKLGELAQFDADLSVVEEAIIFASFLGRSGP
TYEALAHCPLAD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcatccgttccttcatcgccgtcgaactcgccagcagcgtgaccaaacgcgcg
aagcagctgattgaaaaactcaagacggagggcgtcgacgtgaactgggtgcagccgacg
caaatgcacctcaccctcaagtttttggggaacgtggcagatagcgaaattcccgacatc
tgcaaagtggttgctcaagcgactgctgaggtcgagccgttcgaaatcatctgccgtgga
ctgggtggctttcccagttctgccgaggcccgcacgctgtggattggccttgagcaagga
aatgacgagttgcgcgaactgcaagcggccatcgataccgcgctcagcaaccaattgggc
tttgccaaagaacagcggggcttcacacctcacttgacgattggccgtgtgaaaggtggc
acgccggaagggatggcggcaattgcgaccaagctcggcgaactcgcgcagttcgacgcc
gatctgtccgtcgtcgaagaggcgatcattttcgccagctttctcggccgcagtggtccc
acctacgaagcgctggcccactgcccgctagcagactaa
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