Anatilimnocola aggregata: ETAA8_25870
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Entry
ETAA8_25870 CDS
T07027
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aagg
Anatilimnocola aggregata
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aagg03016
]
ETAA8_25870 (truA)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ETAA8_25870 (truA)
Transfer RNA biogenesis [BR:
aagg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAA8_25870 (truA)
Prokaryotic type
ETAA8_25870 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
QDU27499
UniProt:
A0A517YBE6
LinkDB
All DBs
Position
complement(3269967..3270809)
Genome browser
AA seq
280 aa
AA seq
DB search
MPTFKLTLAYDGTDFGGWQWQPNSRTVQAELEKAIERITQQKVRCTASGRTDAGVHALGQ
VVSFQCETGLNCDVLRKGINAELPDDMIVCDLQFAPAEFHAIRDAVRKRYRYVVQDGRLR
DIFAREYVWHVRQKLDERLMWEASRALIGTHDFKSYQSTGSMRLTTERTILDLLVERREA
ELTSRVIIEVEANGFLYNMVRNIVGTLVQIGKGLYPVSFAAEALAACDRRAAGMTAPAQG
LFLIGVEYDGYDDPEMSASLRAAHAAANATELANAEMLDE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccttcaaactcacgctggcctacgacggcactgactttggtggttggcaatgg
cagcccaattcgaggacggtgcaggcggagttagagaaggcaatcgagcggatcacgcag
caaaaggttcgttgcaccgcgagtgggcgaaccgatgcgggtgtgcatgcgctggggcaa
gtggtgagctttcagtgcgaaacgggcctgaactgcgatgtgctgcggaaggggatcaac
gcggaactacccgacgacatgatcgtctgcgatctgcaattcgcgccggccgagtttcat
gcgattcgcgatgcagtgcggaaacgctaccggtatgtcgtacaggatggccggttgcga
gacatctttgcccgcgagtatgtctggcacgtacggcagaaactggatgaacgcctgatg
tgggaagcctctcgcgcgctcattggaacgcacgacttcaagagttatcaatccaccggt
tccatgcgactgacgaccgagcggacaattctcgacctgcttgttgaaagacgcgaagcg
gagttgacgtcgcgcgtgattatcgaagtcgaagccaacggcttcttgtacaacatggtc
cgcaacatcgtcggcacgctggtacaaatcggcaagggcttgtatcccgtcagctttgcg
gccgaagcgctcgcggcctgcgaccgccgcgccgcgggaatgaccgcgccggctcaaggg
ctgtttttgatcggcgtcgagtatgatggctacgacgatcccgagatgtcggcttcgctg
cgggccgctcatgccgctgccaatgctactgaactggccaacgcagaaatgctggacgaa
tag
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