Anatilimnocola aggregata: ETAA8_35260
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Entry
ETAA8_35260 CDS
T07027
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03420
Nucleotide excision repair
aagg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAA8_35260 (pcrA_1)
03430 Mismatch repair
ETAA8_35260 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_35260 (pcrA_1)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETAA8_35260 (pcrA_1)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAA8_35260 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
ETAA8_35260 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
DEAD
AAA_22
SAT
Motif
Other DBs
NCBI-ProteinID:
QDU28426
UniProt:
A0A517YDW7
LinkDB
All DBs
Position
complement(4520739..4522721)
Genome browser
AA seq
660 aa
AA seq
DB search
MSNGLNQPQQDAVNTLRGPLLVLAGAGSGKTRVVTFRIANLIKHGIVPSRILAVTFTNKA
AAEMQERIAGLLGKQKDKPLISTFHSQCVKVLKRHITKLGYPPRFTIYDRGDQESLARQV
LREIRVSDEMMRPGDLINQISRWKTLSLHPAATAQVAQTDKEHLASMGYRKYQRALKNFG
AVDFDDLLLCTEELFEKHNDVRLAEAGLFDHVLVDEYQDTNGSQYRIIKALARDHRNLCV
VGDDDQSIYGWRGAEVKHILQFGKDWPDAKTVRLEYNYRSTAAILDAANKLIVFNKHRHD
KILRAARPGGEKPRILQYNSEVDEAREVVADIARVIRTEGREAKDFAILFRTNEQPRPFE
TELRKAKLPYVVLGSQSFFDRKEVKDLLSLLRTIESPRDEQAMLRIINTPPRGIGAKTVE
GVIAAAVKSGKTAWDVMSGPQLNTICTGATADKVLRFVDMLKKYRAHAEMITKAGKQRRP
AALAELLRQLVSEIGYEAELNRLYPDPNERQNRLASIEEVVNAVAQYEQGKSEVSLGDFL
DEVTLGEREFGDTKDKQLSRNAIALLTMHASKGLEYPHVYIVGLEEGILPHHRTLKAESG
DDIDEERRLCYVGITRAEEKLTLSLALTRMKWGKPRDTQPSRFLFEIIGQAENPRAKGKR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggactcaatcaacctcagcaggatgcagtcaataccttgcgcgggccgctg
ctcgtgctggcgggtgccggtagtggtaagacacgcgtagtgacgttccggattgccaat
ctgatcaagcatggcatcgtccccagccgtattctggcggtcaccttcaccaacaaggcc
gcggccgaaatgcaggagcgtatcgctggactgctgggcaagcaaaaagacaagccgctg
atctccacgttccattcgcaatgcgtgaaagtgctcaagcggcacatcaccaagttgggt
tacccgccgcgattcaccatctatgaccgcggcgatcaggaaagcctggcgcggcaagta
ttacgagagatccgcgtctctgacgaaatgatgcgtcccggcgacttgatcaatcaaatc
agccgctggaagaccctctcgctccatccggccgccaccgctcaagtcgcccaaaccgat
aaggagcatctcgcttcgatgggctaccgcaagtaccagcgggcgctaaagaacttcggc
gcagtcgactttgacgacctgctgctctgtactgaagagttgttcgaaaagcacaacgat
gtccgactcgccgaggcaggactcttcgaccatgtcctcgtggatgaatatcaagatacg
aatggcagccaatatcggattatcaaagccctggcccgcgatcatcgcaatttgtgcgta
gtgggcgacgacgatcaatcgatctacggctggcgtggggccgaggtgaagcacatcctg
cagttcggcaaagactggcccgacgccaagacggtgcgcctcgaatacaactaccgcagc
accgccgccatccttgacgcagccaacaagctgatcgtattcaacaagcatcggcacgat
aagattctgcgtgccgctcggcccggaggggagaagcctcgcattctgcagtacaacagc
gaagtcgacgaagcgcgcgaagtggtcgccgacattgcccgcgtcatccgcaccgaaggt
cgcgaggcgaaggacttcgcgatcctgtttcgtactaatgaacagccgcggccgttcgag
acggaacttcgcaaggccaagctgccgtatgtggtgctcggcagccagtcgttcttcgac
cgcaaagaagtgaaagacctgctttcgctattgcggacgatcgagtcgccgcgtgacgag
caggcgatgctgcgcatcatcaacacgcccccgcgcggcatcggagccaagactgttgag
ggagtcattgccgccgccgtgaagtcgggcaaaactgcttgggacgtcatgtcgggcccg
cagttgaatactatttgcactggcgctacagctgacaaggtgctgcggttcgtcgacatg
ctcaaaaagtatcgcgcgcatgcggagatgattactaaagctggtaagcagcggcgtccc
gctgcgctcgccgaattgctgcggcagttagtgagcgagattggctacgaagcggaactc
aatcgcctctatcccgatcccaatgagcgtcagaatcggctggcgtccatcgaagaagtg
gtcaacgccgtcgcgcagtacgagcaagggaagagcgaagtctcgctgggagacttcctc
gacgaagtcactttaggcgagcgggaattcggcgacacgaaggacaagcagctcagtcgc
aatgcgatcgccttgttgacgatgcacgcctcgaaggggctggagtatccgcacgtttat
atcgtcggactcgaagaggggatcctgccacaccatcgcacgctcaaagcggaatcgggt
gacgacatcgatgaagagcggcggctgtgctacgtcggcatcacccgcgctgaagagaag
ttgacgctatcgctcgcactgacgcgaatgaagtggggcaagccgcgcgatactcagccc
agtcgctttttgttcgagatcatcgggcaagcagagaatccgcgggcgaagggcaagcgt
taa
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