Anatilimnocola aggregata: ETAA8_39880
Help
Entry
ETAA8_39880 CDS
T07027
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03420
Nucleotide excision repair
aagg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAA8_39880
03430 Mismatch repair
ETAA8_39880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_39880
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETAA8_39880
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAA8_39880
MMR (mismatch excision repair)
Other MMR factors
ETAA8_39880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDU28882
UniProt:
A0A517YFF7
LinkDB
All DBs
Position
complement(5153524..5155377)
Genome browser
AA seq
617 aa
AA seq
DB search
MSDVAPNPAQLASQEAWTQLQACLDQRHSFIFEAGAGAGKTYSLIEALRYLIKRDGVELI
RNRQQVACITYTNVATKEIETRTDQHPAIYSSTIHSFCWTLIQGFQPFLRNEIPNIKDWP
ERLKESAKRAVDRMLKERVEAMVRADADQIAAIEMSLVQDRIKLESVGTRNVEYSLGHSR
ADKTTISLGHNDVLVLAAKLLGNEKFRRVLVSRFPVVFIDEYQDTDNVIFNALKAYVIGK
DGSPLIGFFGDHWQKIYGTGCGRIEHPMLKPIGKKANFRSVPAIVDCLNRLRRELPQAVE
DPSAVGEVVVFHTNEWKGERQTGAQWKGDLPDTVAHSYLQAVLENLAEAGWNLAPETSKI
LMLTHNVLAAEQGYRQLADALPRTESFIKKEDPHIAFLVDTVEPVCGAFARKRYGEMFAV
FGAKLQVIGSHGDKAAWSEHLASLVKLRESETIGTVVDHVCNRHLFPVPDAVERKERALK
KLGAAPVPDEAEEITRLRQLRAVPYKQVAALRQFIEEKTPFSTKHGVKGLEFENVLVVFG
RGWNLYNFAQFLEWSGASGIPSGKTDTYERSRNLFYVACSRPKKRLALLFTQELTPGALA
TLAAWFGAGAIRPLPNL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtcgctcccaatcctgcacagttggcttcacaagaggcatggacgcagttg
caggcgtgcctagaccagcgccacagctttattttcgaggcaggagcgggtgcagggaaa
acctactctctcatcgaagccctgcgttacctcatcaagcgggacggagttgaactcatc
cgaaaccgccagcaagttgcctgcatcacctacaccaatgtcgcgacgaaggaaattgag
acacgaacggaccaacacccggccatctattcgtcaacgattcactcgttctgctggacg
ctgatccagggattccagccattcctcagaaatgagattccgaacattaaggactggcca
gagcggctcaaggaatcggcgaagcgagctgtggaccggatgctcaaagagcgtgttgag
gcgatggtgcgggcagacgcagaccaaatcgccgctattgaaatgtccttggtgcaggat
cggataaagctagagtctgttggaactcggaatgtcgaatacagcctcgggcattcgaga
gcggacaagaccaccatatcgctggggcacaacgatgttttggtcttagccgctaaacta
ttggggaacgagaagttccgtcgcgtcttagtgagtcgtttccccgtagttttcatcgac
gaataccaagacaccgacaacgtgatcttcaacgcgctgaaggcgtatgtcattggaaag
gacggcagccccttaatcgggttctttggcgaccactggcagaagatttacggcacaggt
tgtgggaggatcgaacaccccatgctgaagccaattgggaagaaggcgaatttccgctct
gtgccggcgatagtggactgcctgaatcggctgcgccgggaacttcctcaagctgtggaa
gacccgagtgccgtcggcgaggtggtggtattccacacaaacgaatggaaaggtgagcgc
caaactggagcgcaatggaagggagatcttcccgacacagttgcccattcatatctccaa
gcggttctcgagaatttggcggaagcagggtggaatcttgcgccagaaaccagcaagata
ctcatgctcacccataacgtcctcgccgcagaacaggggtatcggcaacttgccgatgca
cttccgcgaacggaatccttcatcaagaaggaagacccacacatcgctttccttgtggac
acagttgagccggtatgcggagcgttcgcgaggaaacggtatggcgagatgttcgcggtt
tttggcgcaaagttacaggtgatcggatcgcacggtgataaggcggcgtggtctgaacac
ctcgcttcccttgtgaagcttcgggaatctgagaccatcggcacggtcgttgaccatgtt
tgcaatcgacaccttttcccagtgcccgatgccgttgagcgaaaagagcgcgcactaaag
aaactgggtgctgcgcccgtcccagatgaagccgaggagatcacacgcttacggcaactg
cgcgccgtgccctacaagcaggttgccgcgttaaggcagttcatcgaagagaaaaccccg
ttttccaccaaacacggcgtgaaggggctagagttcgaaaatgttctggtggttttcgga
cgcggttggaatctatacaactttgctcagttcctggagtggtctggtgcgtcaggaatt
ccatccggcaaaaccgacacttatgagaggagtcgcaatctgttctacgtcgcctgctca
cgtccaaagaaacgattggctctactgtttacgcaagagctgacgccaggtgctttggca
actcttgcggcatggttcggagccggtgcaattcgacccttacccaatctctag
DBGET
integrated database retrieval system
