Anatilimnocola aggregata: ETAA8_45830
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Entry
ETAA8_45830 CDS
T07027
Symbol
recD2_3
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ETAA8_45830 (recD2_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_45830 (recD2_3)
Enzymes [BR:
aagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ETAA8_45830 (recD2_3)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAA8_45830 (recD2_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
nSTAND3
AAA_16
AAA_28
AAA_22
PIF1
NPHP3_N
NTPase_1
DEAD
NACHT
RsgA_GTPase
MeaB
TsaE
AAA
AAA_5
Helicase_RecD
KTI12
ATP_bind_1
TrwB_AAD_bind
T2SSE
RuvB_N
MoCF_biosynth
NB-ARC
ABC_tran
ATPase_2
Herpes_Helicase
AAA_29
cobW
AAA_14
DnaB_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QDU29473
UniProt:
A0A517YGX2
LinkDB
All DBs
Position
complement(5846030..5848195)
Genome browser
AA seq
721 aa
AA seq
DB search
MPETLKGIIERVTFHNPDNGFAVLRVKVKGRDDLVSVVGSTMSVTAGEHFEATGHWVIDR
EHGQQFKADELKTTHPASAEGIEKYLASGAIRSIGPKIAAKIVSIYKERTLEIFEQAPDF
LLHVKGIGAERLKRIRKSWDEQKEVRKITLFLTEHGITSGRAVRIYRTYGHESIAKIKEN
PYQLANDIRGIGFKTADELAATLGIDRNSPYRAKAAVRYTLQDLASQGHCGYPEPGVMEH
ANKLVEIEQKIISDAVRSVVQDGSVIREPVEGEPWLYLAGLYRAEVGLAQSVHRIASATP
HPLPRFDVEKAIAWVEQRLSIQLAAAQKEAIRQACQQKLLVITGGPGVGKTTLVRSILEI
FAAKELKCVLAAPTGRAAKRLAETTGRTAKTVHRLLEFDPATGEFKRNAQHLLTGDLFVL
DETSMVDVVLGHQVLRAIPSEACVILVGDVDQLPSVGPGSVLADLISSNVVPIVRLTEIF
RQASESRIITAAYAINHGQMPNPSKSEELTDFYFIESNEPEGIQDTLVRLVKERIPARFG
FDPKSDIQVLTPMNRSVLGARNLNQVLQKAINPGDGGPEVQRFGWTFRIGDRVIQTVNNY
DRDVFNGDLGIIEQINRIEQVMTINFEGRLVEYDFGDLDELALAYVLSIHKSQGSEFPCI
VIPLHTQHYLMLQRNLLYTAVTRGKKLVVLVGSKKALNMAVRRADTGQRYTALRKRLQEI
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaacgctgaaaggaattatcgaacgagtcaccttccacaacccagacaatggg
tttgcggtgctgcgggtgaaggtcaagggacgtgacgatcttgtttctgtcgttggcagc
acgatgtccgtaactgcgggcgagcatttcgaggcaaccggtcattgggtgatcgaccga
gagcatgggcagcagttcaaagccgacgaactgaaaacaactcacccggcgtctgccgag
ggcatcgaaaaatacctcgcatcgggagccattcgcagcattgggccgaagatcgccgcc
aagatcgtttcgatctacaaggagcggacgctggaaatcttcgagcaggcccccgatttt
ctactccatgtgaaaggcattggtgcagaacggctcaagcgaatccgcaaaagctgggat
gagcagaaagaagttcgcaaaatcaccttgtttctgaccgagcatgggatcacgtcaggc
cgagcagtccgcatctaccgaacctacggccacgagtccattgccaaaatcaaagagaac
ccataccaactggccaacgacatccgtgggattggcttcaagaccgccgatgaattggca
gccactctcggcatcgaccgcaacagcccgtaccgagctaaggctgcggtgcgatacacg
ctgcaagacttggcgagtcaggggcattgtggttatccagagccgggggtgatggaacat
gcaaacaagctcgtcgaaatcgagcagaagatcatttcagatgccgtgcggagcgtggtc
caagacggaagcgtgattcgggaacctgttgagggcgagccgtggctatacctcgccggt
ctctaccgggccgaagtcggactggctcagtcggttcatcgaattgcttcggccacacca
catccgctgccacgctttgatgtcgagaaggcaatcgcctgggttgaacagcggttgagc
attcaactagcagcagcgcagaaagaagcgattcggcaagcatgtcagcaaaagctgctc
gtcatcacgggcggtcccggtgttggcaagacgacgctcgttcgcagcatcctcgaaatc
tttgccgccaaggaactgaaatgcgtgctggcagcgcctacgggtcgggcagccaagcgg
ttggcggagactactggccgcactgccaagacggttcaccggctgcttgagtttgacccc
gccaccggcgagttcaaacgcaacgcacaacacctactgaccggtgacctgttcgtgctg
gatgaaacgtcgatggtcgatgtcgttctcggtcaccaagtcttgcgggccattcctagc
gaagcctgcgtgatccttgtaggtgacgtggaccagcttccctcggttggccctggttct
gtgctggctgatctgatttcatcgaacgtggttcctattgtgcgacttaccgagattttc
cggcaagcaagtgaaagccgaatcatcaccgccgcctacgccatcaaccacgggcagatg
ccgaatccgtccaagtccgaagaactcaccgacttctatttcatcgaatcgaatgaacct
gaaggcattcaagatacgctggtgcggcttgtcaaagaacgaatccctgctcgctttggc
ttcgacccgaaatccgacatccaagtcctgacgcccatgaatcggtctgttttgggagcc
aggaacctcaaccaagtgctgcaaaaggcgatcaatccgggcgacggcggacccgaagtg
cagcggtttggctggacgtttcgtatcggggaccgtgtaattcaaaccgtcaacaactat
gaccgggatgtattcaacggcgatttgggaatcatcgagcagatcaaccgcatcgagcag
gtaatgacgatcaactttgaggggcggctcgtcgagtacgatttcggcgatctcgacgaa
ctggctttggcttacgtgctgtcgattcacaagagccagggttcggagttcccgtgcatc
gtgattccactccacacgcagcactacctgatgttgcaacgcaacctgctctacacggcg
gttaccagaggcaagaagctcgtcgtgctggtgggatcaaagaaggccctgaacatggcc
gtgcgtcgagcggataccggacaaagatacactgcgttgaggaagagattgcaagagatc
gggtag
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