Anatilimnocola aggregata: ETAA8_58670
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Entry
ETAA8_58670 CDS
T07027
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAA8_58670 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aagg03019
]
ETAA8_58670 (rhlE)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ETAA8_58670 (rhlE)
Messenger RNA biogenesis [BR:
aagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETAA8_58670 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDU30719
UniProt:
A0A517YKH3
LinkDB
All DBs
Position
complement(7399086..7400750)
Genome browser
AA seq
554 aa
AA seq
DB search
MSFESLSLAPEILRAVLAEGYTIPTPIQAQAIPHLLAGRDLLGCAQTGTGKTAAFALPIL
HRLSTTKPKQQPEPARGEVTPSREGRFHDDRPQHGHMLNAFSRTRHAPKHRRPTRALILS
PTRELASQIADSLDTYGRNTRLRFVTVYGGVSQGPQVRMLQQGVDIIIATPGRLVDLIQQ
GWIDISTIEMFVLDEADRMLDMGFLPDLKRISDCLPSERQTLLFSATMPDPIQRLADQIL
RNPAHVKIAPEKATTELIEQQVYHVAKGQKADLLTGLLQRPDFSRVIVFTQTKHGADRVC
KQLDRANIRSEAIHGNKSQNARQRALNAFKSNQIQVLVATDVAARGIDVDNITHVIQFDL
PNEPETYVHRIGRTGRAGAAGLAISFCDQEQRTELRDIERLINRRLDVQKDHPDGVEVLQ
AAQVKSAPANPPGKFRFGGAVRNRKPFGKSSRGPASNGGDRSAPPREGRPSSFGGDRPQK
DRPQGDRPSADQSRSRSERPFGAERPQRSSESRSGESRPSNGPRPQGDRPAKSFGGASKF
KFKSKRRPATAGRG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgaatcgctctcgttagcgccagagattctgcgcgccgtgttagccgaaggc
tacacaattcctactcctatccaggctcaggcgatcccacatctgttagctggccgagat
ttgctcggctgcgctcagaccggtaccggcaagaccgctgcgttcgcgctgccgattttg
catcgcctgtccacgacgaaacccaagcagcagcccgaaccggctcgcggcgaagttacc
ccgtcgcgcgaaggtcgttttcatgacgatcgtccgcagcacgggcacatgctcaatgcg
ttttctcgcacgcggcatgcccccaagcaccgtcgtccgacgcgcgctttgatcctttcg
cccacccgcgaattggcttcgcaaattgccgatagcctcgatacctatggtcgcaatacg
cgactgcggttcgtcactgtctatggtggtgtgagccaaggtccgcaagtgcgcatgttg
cagcaaggcgtcgatatcatcatcgccacgccgggtcgccttgtcgatttgattcagcaa
ggttggatcgacatcagcaccatcgaaatgttcgtcctcgacgaagccgaccgcatgctc
gatatgggctttttgcccgacttgaagcggatcagcgattgcttgccctccgaacggcag
acgttgctcttctcggccacgatgccggacccgattcaacgcctggctgatcagattttg
cgcaatcccgcgcacgtgaagatcgctcccgaaaaggcgacgacggaactgatcgagcaa
caggtctatcacgttgcgaaggggcagaaggccgacttgctgactggcctgctgcaacgc
cccgatttctcgcgcgtgattgtcttcacgcagacgaagcatggagccgatcgcgtttgc
aagcagttggatcgcgcgaacattcgctcggaagccattcacggcaacaagagccagaat
gctcgccagcgagccctgaacgcgttcaagtcgaaccagattcaagtgctcgtggccacc
gatgtcgccgcacgcggtatcgatgtcgataacatcacgcacgtgattcagttcgatctg
ccgaacgaaccagagacctacgttcaccgcattggccgcaccggccgcgcgggggctgct
ggtctggcgatttcgttctgcgatcaggaacaacggaccgaactgcgcgatatcgaacgg
ctgatcaatcgccgcttggacgtgcagaaagatcatccggacggtgtcgaagttctgcaa
gctgcccaggtgaagtcggctccggccaatccacccggtaagttccgcttcggtggtgct
gttcgtaatcgcaagccattcggcaagtcgtcgcgcggtccagccagcaatggcggcgac
cgatcggcaccgccccgtgaaggtcggccgagcagttttggcggagatcgccctcagaag
gatcgcccgcaaggcgatcgtccttcggccgatcaaagtcggtcgcggagcgaacgtccg
ttcggtgccgagcggccccagcgatccagcgaatcgcgttctggtgaatcgcgccccagc
aatggtccacgtccgcagggcgatcgaccggccaagtcgtttgggggcgccagtaagttc
aagttcaagagcaagcgacgtccggcaactgctgggcggggctag
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