Arthrobacter agilis: NCTC2676_1_00087
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Entry
NCTC2676_1_00087 CDS
T07056
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aagi
Arthrobacter agilis
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aagi03032
]
NCTC2676_1_00087
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_00087
Enzymes [BR:
aagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC2676_1_00087
DNA replication proteins [BR:
aagi03032
]
Prokaryotic type
DNA Topoisomerases
NCTC2676_1_00087
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC2676_1_00087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
VDR30838
LinkDB
All DBs
Position
1:91743..92717
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AA seq
324 aa
AA seq
DB search
MARLRRSNTRRPGISRRRHGKGFSYRAPSGELLQDREEIERIKDLVIPPAWKDVWIAPYP
NGHVQAIGTDDAGRRQYMYHPAWREQKDREKFDRALDFGAKLPSARRAITQHLRSDGVQR
ERAFAAALRIVDSGALRIGSAQYAEANGSFGVTTLLVEHCTIDGNVIVFDFPGKSGQHWD
TRLEDEDLAAALRPMVGREAADTVLAYQSDNGAWHHVDGAQLNEFLRQVTGGPFTAKDFR
TWQATVVAAMALAKEDVGATTRTARQKAVTATMKAVADHLGNTPTVARSSYVDPRLVDRF
MSGEVIPIATYSASEKAVQELLRD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattgcgccgcagcaacacgcgcaggcccggtatctcccgccgcaggcacggc
aagggcttcagctaccgcgccccgagcggcgaactcctgcaggaccgcgaggagatcgag
cgcatcaaggacctcgtcatcccgccggcctggaaggacgtgtggatcgcgccctacccg
aacgggcacgtccaggccatcggcacggacgacgccggtcgccgccagtacatgtaccac
ccggcctggcgcgagcagaaggaccgcgagaagttcgaccgcgcgctcgatttcggcgcg
aagctcccgagtgcccgccgtgccatcacccagcatctcaggagcgacggcgtgcagcgc
gagcgcgccttcgcggccgcactgcgaatcgtcgactccggagcgctgaggatcgggtcc
gcacagtacgcggaggccaacgggtccttcggggtcaccacgctgctcgtggagcactgc
accatcgacgggaacgtgatcgtcttcgacttcccgggcaagagcggccagcactgggac
acgcggctcgaggacgaggatctcgccgccgccctgcgtcccatggtggggcgcgaggct
gcggacaccgtcctcgcctatcagtccgacaacggcgcatggcaccacgtcgacggcgcg
cagctgaacgagttcctccgccaggtcacgggcggacccttcacggccaaggacttccgg
acctggcaggccacggtggtcgccgccatggcgctcgcgaaggaggacgtcggggccacc
acccggacggcgcggcagaaggcggtcaccgccacgatgaaggccgtcgcggaccacctc
ggcaacaccccgacggtggcgcgcagctcctatgtggacccccggctggtggaccgcttc
atgagcggtgaggtcatcccgatcgccacctactcggcctccgagaaggccgtgcaggag
ctgctgcgcgactga
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