Arthrobacter agilis: NCTC2676_1_00154
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Entry
NCTC2676_1_00154 CDS
T07056
Symbol
alkA_1
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC2676_1_00154 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aagi03000
]
NCTC2676_1_00154 (alkA_1)
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_00154 (alkA_1)
Enzymes [BR:
aagi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC2676_1_00154 (alkA_1)
Transcription factors [BR:
aagi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NCTC2676_1_00154 (alkA_1)
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC2676_1_00154 (alkA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
VDR30904
LinkDB
All DBs
Position
1:complement(160629..161447)
Genome browser
AA seq
272 aa
AA seq
DB search
MAAILANHAIPGCEVTESGAAGPTHTRLLSTPGGPRRITVTIRPHDVELSAETDDHAEFA
HLVATTRAWLDLDTDTVAVARAFDDDPLLGPLVRERPGLRAVGYPEPFEAAVMTVLGQQV
SVAAGGTFGGRLAAAYGTPTPSGLTLFPPPEVIASAPHEELRAAVGVTRTRAATVQNVAR
AVVDGLSLDPLADRGQLRKDLLAIPGIGPWSADYLTVRVLRDADAFTPGDLVARRAMGNP
SIRDAERRAEPWRPFRAYALFHLWTSATYRGD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatcctcgccaaccacgccatcccgggctgcgaggtgacggaatccggcgct
gcgggccccacgcacacgcgtctgctcagcacgccgggcggaccccgtcgcatcacggtc
accatccggccccacgacgtcgagctctccgcggagacggacgatcacgccgagttcgcc
cacctcgtggccaccacgcgggcatggctggacctcgatacggacacggttgccgtcgcc
cgggcgttcgacgacgacccactcctcggcccgctggtccgcgagcgcccgggcctgcgg
gccgtcggatatcccgaaccgttcgaggcggccgtcatgacggtgctcggccagcaggtc
tccgtcgcggcgggcggcaccttcggaggccggctcgcggcggcctacgggacgccgacg
ccgtcgggcctcaccctgttccccccacccgaggtcatcgcgtccgcgccgcacgaggag
ttgcgggccgccgtcggagtcacgcgcacgcgcgccgccacggtccagaacgtggcgcgc
gccgtcgtcgacggactctcactcgaccccctggcggaccgcgggcagctgaggaaggat
ctcctggcgataccgggcatcggtccgtggtccgcggactacctcacggtgcgcgtcctg
cgcgacgccgacgccttcacccccggcgatctcgtggcgcgccgcgcgatgggcaacccg
agcatccgcgatgcggaacgccgggccgagccctggcggccgttccgcgcctacgcactc
ttccacctctggacgtcggcgacctaccgcggggactga
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