Arthrobacter agilis: NCTC2676_1_00385
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Entry
NCTC2676_1_00385 CDS
T07056
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC2676_1_00385 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aagi03019
]
NCTC2676_1_00385 (recQ_1)
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_00385 (recQ_1)
Enzymes [BR:
aagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC2676_1_00385 (recQ_1)
Messenger RNA biogenesis [BR:
aagi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC2676_1_00385 (recQ_1)
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC2676_1_00385 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DacZ_P
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VDR31128
LinkDB
All DBs
Position
1:410159..412273
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AA seq
704 aa
AA seq
DB search
MSPTTTLNEQATTILHTLVGSPEARFHDGQFEAIEALVEDGRRALVVQRTGWGKSAVYFV
ASLLLRARGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANQTEWQDITAKLQADEV
DVLLVSPERLNNPSFRELYLPELMRRTGLLVIDEAHCISDWGHDFRPDYRRLRDLIMGLP
QGVPVLATTATANSRVVEDVEEQLGAGGTDVFTLRGELARKSLRLGVLRLPSPRARLAWL
LTHLADLPGSGIIYALTVSAAEDTARLLRENGHAVRAYTGRTDPADREVAEAALKNNEVK
ALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRGTPNADVLLLPGAEDRDIW
EYFATASMPSEDAAVRVLDALSPGTVLSTPALETRVNLKRSPLELLLKVLDVDGAVRKVT
GGWESTGTPWSYDADRYRRISEARIVEQRAMLDYENTAGCRMEFLSTSLDDPAATPCGRC
DNCAGPWYSDDVAHEASDSANQALSRVGVELEPRGQWPSGMDKLGVPLKGKLKPGEVSLP
GRALARLTDLGWGNRLRELTADATPDAPLDPAVVDAVVRVLAQWGWDERPVAVVSVPSRR
RPQLIGSLATALAEVGRIPYLGQLETPHGFPQGQPGGNSAFRLAQVWDHFTVPDAGSAWF
AANPGPVLLVDDFADSRWTITEAGRALRAAGASGVLPFALALKA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccaccaccaccctgaacgagcaagccaccacgatcctccataccctcgtcggg
tcacccgaggcccggttccatgacggtcagttcgaggccatcgaggcactcgtcgaagac
ggccgccgggcgctcgtcgtgcagcggacggggtggggcaagtcggccgtgtacttcgtg
gcaagtctcctcctgcgtgcccggggcgccgggcccacgctgatcgtgtcgccgctgctg
gccctcatgcgggaccaggtggccgccgcggcccgggccggggtgcgtgccgtggccatc
aactccgcgaatcagaccgaatggcaggacatcacggcgaagctccaggcggacgaggtg
gatgtgctcctcgtctcgcccgaacgtctcaacaacccgtccttccgtgagctgtatctt
ccggaactgatgcggcgcaccggtctgctggtgatcgacgaggcacattgcatctccgac
tgggggcacgacttccggccggactaccgcaggctccgcgacctgatcatggggctgccg
cagggcgtgccggtcctcgccaccacggccacggccaactcccgcgtcgtggaggacgtc
gaggagcagctcggcgcgggcggtaccgatgtcttcaccctccgcggtgaactcgcccgc
aaatccctgcgcctcggcgtgctcaggctgccgagcccccgtgcacgcctggcctggctc
ctgacacatctggcggacctgcccggcagcggcatcatctatgcgctcaccgtgtccgcg
gcggaggacacggcacggctcctgcgcgagaatggccatgcggtccgcgcctacacgggc
cggaccgaccccgccgatcgcgaggtggcggaggcggccctgaagaacaacgaggtgaag
gcgctcgtcgccacgagcgcactcggcatgggcttcgacaagcccgatctcggtttcgtg
gtgcacctcggggcgccgtcgtcgcctgtcgcctactaccagcaggtcggccgcgccggc
cgcgggaccccgaacgccgacgtcctgctgctgccgggggcggaggaccgtgacatctgg
gagtacttcgccacggcgtccatgccgtccgaggacgccgcggtcagggtcctggacgcc
ctgtctccgggcacggtcctctcgacacccgccctcgagacccgcgtcaacctcaaacgt
tcgcccctcgaactcctcctcaaggtgctcgacgtcgacggcgcggtccggaaggtcacg
ggcgggtgggagagcaccgggaccccgtggagctatgacgccgaccggtaccggcgcatc
agcgaggcgcgcatcgtcgaacagcgcgcgatgctcgactacgagaacacagccgggtgc
cgcatggaattcctgtcgacctcgctcgacgaccccgcagcgaccccgtgtggtcgatgc
gacaactgtgccgggccctggtactcggacgacgtggcgcacgaggcctccgattccgcg
aaccaggccctcagccgggtaggagtggagctggagccccggggtcagtggccgagcggc
atggacaagctcggtgtacctctgaaggggaagctgaagccgggcgaagtgagcctgccc
gggcgggcgctcgcccgcctgaccgatctcggctggggcaacaggctgcgtgaactcacg
gcggacgcgacaccggatgcgccgctcgaccccgcagtcgtcgacgccgtggtccgggtg
ctggcgcagtggggctgggacgagcggccggtagccgtggtgagcgtcccgtcccggcgt
cgcccccagctcatcggctccctggcgactgcgctcgcggaggtgggtcgcatcccgtac
ctcggacagctcgagacgccgcacggattccctcaggggcaacccggaggcaacagcgcc
ttccgcctcgcgcaggtctgggaccacttcacggtcccggacgcggggtccgcctggttc
gccgcgaatcccgggccggtgctgctggtggacgacttcgccgacagtcggtggacgatc
accgaggcagggcgcgccctgcgtgctgccggtgcctcgggcgtgctgcccttcgcgctc
gctttgaaggcctga
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integrated database retrieval system
