Arthrobacter agilis: NCTC2676_1_00525
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Entry
NCTC2676_1_00525 CDS
T07056
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi03420
Nucleotide excision repair
aagi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC2676_1_00525 (pcrA_1)
03430 Mismatch repair
NCTC2676_1_00525 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_00525 (pcrA_1)
Enzymes [BR:
aagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC2676_1_00525 (pcrA_1)
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC2676_1_00525 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC2676_1_00525 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
VDR31258
LinkDB
All DBs
Position
1:557325..559820
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AA seq
831 aa
AA seq
DB search
MDMLFDPYVSPPTPAEKKRAREAAMGNEATPAVRGSAESGDPAAAHLPSRAGVDEVRARE
LLVGLNMQQEEAVKHGGSPLLIVAGAGSGKTRVLSHRIAYLLATGRSHPGQILAITFTNK
AAAEMRERIEGLIGDVAKRMWISTFHSSCVRILRREAASVGLNSNFSIYDSADTLRLITL
VAKGLDLDPKKVPPKAIQHKISALKNELVDEESFASTVNLADPFEQAVAEVYTGYAQRMR
QANAMDFDDLIAQTVYMFRAFPGVADYYRRRFRHVLVDEYQDTNHAQYSLVREIVGVPGE
STEDPAELTVVGDSDQSIYAFRGADVRNIVEFENDYPSARTILLEQNYRSTQNILSAANA
VISRNPNRPEKRLWTAEGSGEKIVGYVGENEHEEARFISEEIDRLQDEENLRPGDVAVFY
RTNAQSRSIEEILLRVGLPYKVVGGTRFYERKEIKDALAYLRVLVNSDDVVNLRRILNEP
KRGIGDRAEYALAALSERERISFMQALRRADQAPGMATRSVNAVAGFVKLVDDLAEVAAG
SGASAALEAVLEQTGYLEQLRISNDPQDESRVENLAELVAVVREFERDNPEGTLGDFLEQ
VSLVADADQIPDAPDGSAADVQRAVEEARRQGVVTLMTLHTAKGLEFPVVFLTGMEQGIF
PHQRSATDPKELAEERRLAYVGLTRARQRLYITRSEVRSMWGQSQYNPASQFVSEIPEEL
IHWKREGAAKPAWSGGGGSSSGPRFSGSYWGASGGGFSGGGAPAAAKAIGRVQPQKEVVS
VSVGDHVNHASFGNGTVLAVEGAGDKTVAKVRFDVGEKRLLLRYAPLTKVA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcttttcgatccctacgtctccccgcccacgcccgccgagaagaagcgtgcc
cgcgaagctgcgatggggaatgaggcgacgcccgccgtccgagggtccgctgaatcgggg
gatcccgcggccgcccacctgccgtcgagggcgggcgtggacgaggtgcgtgcgcgggag
ctgctcgtcgggctcaacatgcagcaggaagaggcggtgaagcacggcggctcgccgctc
ctgatcgtcgcgggcgcagggtccggcaagacgcgcgtgctgagccaccggatcgcctac
ctgctcgccacgggccgttcacaccccgggcagatcctcgcgatcaccttcacgaacaag
gcggcggccgagatgcgcgagcgcatcgaggggctgatcggcgacgtcgcgaaacgcatg
tggatctccacgttccactcctcgtgcgtgcggatcctgcgtcgcgaggcggcgtcggtg
gggctgaactcgaacttctcgatctacgactccgcggacaccctgcgcctcatcaccctg
gtggccaagggcctggacctcgacccgaagaaggtcccgccgaaggccatccagcacaag
atctcggcactgaagaacgaactcgtcgacgaggagtccttcgcctccaccgtcaacctc
gcggacccgttcgaacaggccgtcgccgaggtctacacgggctatgcccagcgcatgcgc
caggccaacgccatggacttcgacgacctcatcgcacagaccgtctacatgttcagggcc
ttccccggagtggcggactactaccggcgccgtttccgccacgtcctcgtggacgagtac
caggacaccaaccatgcgcagtactccctggtccgcgagatcgtcggtgtgccgggcgaa
tcgacggaggatcccgcggagctgacggtggtgggtgactccgaccagtcgatctacgcg
ttccgtggcgccgacgtacggaacatcgtcgagttcgagaacgactacccgagtgcacgc
acgatcctgctcgagcagaactaccgctccacccagaacatcctcagtgcggccaacgcg
gtgatctcccgcaacccgaaccggccggagaagcgcctctggacggccgagggcagcggc
gagaagatcgtcggatacgtcggcgagaacgaacacgaggaagctcgtttcatctcggag
gagatcgacaggctccaggacgaggagaacctgcgccccggcgacgtggccgtcttctac
cggaccaacgcgcagtcccggtccatcgaggagatcctgctgcgcgtcggcctgccgtac
aaggtggtgggcggcacacgcttctacgagcggaaggagatcaaggacgccctcgcgtac
ctgcgggtgctggtgaactccgacgacgtcgtgaacctgcggcgcatcctgaacgagccc
aagcgcggcatcggcgaccgcgccgagtacgctctcgccgccctcagcgagcgtgagcgc
atcagcttcatgcaagccctccggcgcgcggaccaggcgcccggcatggccacgcgctcg
gtcaacgcggtcgcggggttcgtcaagctcgtcgacgacctcgcggaggtggccgctggt
tccggtgcgtccgccgccctggaagcggtgctggagcagacgggctacctcgagcagctg
cgtatcagcaacgacccgcaggacgagtcacgcgtggagaacctcgccgaactcgtggcc
gtggtgcgcgagttcgagcgggacaatcccgagggcacgctgggggacttcctcgagcag
gtgtccctcgtggccgatgccgaccagatccccgacgcccccgacgggtccgccgccgac
gtgcagcgcgccgtcgaggaggcgcgccggcagggtgtcgtcacgctcatgacgctgcac
acggcgaagggcctcgagttccccgtcgtgttcctcaccggcatggagcagggcatcttc
ccgcaccagcggtcggccaccgatccgaaggagctcgcggaggaacgccgcctcgcgtac
gtgggcctcacccgggcccgccagcgcctctacatcacccggtccgaggtgcgcagcatg
tggggccagagccagtacaaccccgcgagccagttcgtcagcgagatcccggaggagctc
atccactggaagcgggagggtgctgcgaaaccggcctggtccggcggcggggggagcagc
agcggtccccgcttcagcgggtcctactggggtgccagcggtggcggattctccggtggc
ggtgctccggccgccgcgaaggcgatcggtcgggtgcagccgcagaaggaggtcgtctcg
gtgtccgtcggcgaccatgtcaaccacgcgagcttcggcaacggtacggtgctggccgtc
gagggtgcgggggacaagacggtcgcgaaggtgcggttcgatgtcggcgagaagcggctc
ctgctgcgctacgcgccgctgacgaaggtggcctga
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