Arthrobacter agilis: NCTC2676_1_00825
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Entry
NCTC2676_1_00825 CDS
T07056
Symbol
csd
Name
(GenBank) Probable cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi00450
Selenocompound metabolism
aagi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NCTC2676_1_00825 (csd)
Enzymes [BR:
aagi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NCTC2676_1_00825 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NCTC2676_1_00825 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
VDR31554
LinkDB
All DBs
Position
1:896498..897814
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AA seq
438 aa
AA seq
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MPVVATPATLTPSHAGLTDAEVHRIRNDFPILGTDVGGTPLVYLDSGATSQNPTSVMEAE
QEFYEQRNAAVHRGAHSLAVDATDAYEDARAAVARFIGARTRELVWTSNATEGINLVAYA
MSNASLGRGGAAAQRFAVGPGDSIVVTEMEHHANLIPWQELAARTGAELRFIPVDDDGAL
SLEAAAAVITGTTRIVAFSHASNVLGTINPVHELVALAQDVGALTLLDACQSVPHLPVDA
TSLDVDFLVFSGHKMLGPTGIGALYGRAELLDAMPPFLTGGSMITTVTMERAEYLPAPNR
FEAGTQRISQAVALGAAANYLSETGMDRIEAWEGRLGALLVEGLSAIDGVRVLGPGAGVP
RIGLAAFDVDGVHAHDVGQFLDDKGIAVRVGHHCAQPLHRRLGLTASTRASTYLYTTTDE
VEAVLQAVAQVRPFFGAQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtggtagcaacacccgcgaccctcacgccgtcccacgcggggctgacggacgcc
gaagtgcaccggatccgcaacgacttcccgatcctcggcaccgacgtcggcggcacgccg
ctcgtctacctggactcgggcgccacctcgcagaacccgaccagcgtcatggaggccgag
caggagttctacgaacagcgcaacgccgcggtgcatcgcggtgcgcactccctcgcggtc
gacgcgacggacgcgtacgaggacgcacgcgccgccgtcgcccgcttcatcggcgcccgc
acgcgcgagctcgtctggacctccaatgccaccgagggcatcaacctcgtggcctatgcg
atgtccaacgcgtccctcgggcgcggaggagctgcagcgcagcgcttcgcggtgggcccg
ggggacagcatcgtggtcaccgagatggagcaccacgccaacttgatcccctggcaggag
ctcgcggcgcgcacgggggcggagctgcgcttcatccccgtggacgacgacggcgcgctg
agcctcgaggccgcggccgcggtgatcacgggcaccaccaggatcgtcgccttctcgcac
gcctcgaacgtgctgggcaccatcaatcccgtgcatgaactcgtcgcactggcgcaggac
gtcggggccctgacgctgctggacgcctgccagtcggtcccgcaccttcccgtcgacgcg
acgtcgctcgacgtcgacttcctcgtgttctcggggcacaagatgctcggtcccaccggg
atcggtgccctctacggccgcgccgagctgctcgatgccatgccgcccttcctgaccggc
ggttccatgatcaccacggtgaccatggaacgtgccgagtacctccccgccccgaaccgc
ttcgaggccggcacgcagcgtatctcgcaggccgtggcgctcggagcggcggccaactac
ctgtcggagaccgggatggaccgcatcgaggcctgggagggcagactgggcgccctgctc
gtcgaggggctctcggcgatcgacggcgtccgggtcctcggaccgggtgccggagtcccg
cggatcggcctggccgccttcgacgtcgacggtgtccacgcccacgacgtgggccagttc
ctcgatgacaagggcatcgcggtccgggtgggccaccactgcgcgcagcccctgcaccgg
cgccttgggctcaccgcgagcacccgtgcgagcacgtacctctacaccacgacggacgag
gtggaggccgtcctgcaggccgtcgcgcaggtccgtcctttcttcggagcacagtga
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