Arthrobacter agilis: NCTC2676_1_00953
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Entry
NCTC2676_1_00953 CDS
T07056
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aagi
Arthrobacter agilis
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aagi03016
]
NCTC2676_1_00953 (truB)
Enzymes [BR:
aagi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC2676_1_00953 (truB)
Transfer RNA biogenesis [BR:
aagi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC2676_1_00953 (truB)
Prokaryotic type
NCTC2676_1_00953 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
VDR31679
LinkDB
All DBs
Position
1:1038052..1038987
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AA seq
311 aa
AA seq
DB search
MCAAVDHILGGVNSGQVHSGLIIVDKPQGWTSHDVVGRLRRLAGTRKVGHAGTLDPMATG
VLVIGINRATRLLTFIVGTSKTYTATIRLGQSTITDDAEGEVTGGSIAAAVTEQDIRDAV
SALTGEIQQVPSSVSAIKVKGERSYARVRSGEEVDLPARPVTVHRFEIHAIRRVSSGRLQ
DLDVTVECSSGTYIRALARDLGAALGVGGHLTALRRTQVGPYGIEQASTLEELAEDLRLL
PLDDAGRALFPVRELSATEAADVSHGRRIDPSEPADQPVAAFAPDGTLVALLENRGAAAR
TLLVFAPGGKE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgccgccgtggaccatatactgggaggcgtgaattccgggcaggtccactcaggg
ctgatcatcgtggacaagcctcagggctggacgagtcatgacgtcgtcgggcgcctgcgc
cggctcgccggaacccggaaggtcggtcacgccggcaccctcgacccgatggcaaccggc
gtcctggtcatcgggatcaatcgtgccacgcgcctgctgaccttcatcgtgggcacgtcg
aagacctacaccgccacgatccggctgggacagtccaccatcacggacgacgccgagggc
gaggtcacgggtgggagtatcgcggctgccgtgaccgaacaggacatccgggacgccgtc
agcgccctcaccggggagatccagcaggtgcccagcagcgtcagcgccatcaaggtgaag
ggggagcggtcctacgcccgggtgcggtcgggcgaggaggtcgacctgccggcccgaccc
gtgacggtccaccggttcgagatccatgcgatccgacgggtcagcagcgggcgcctgcag
gatctcgacgtcaccgtcgagtgcagttccggtacgtacatccgtgcactcgcgagagat
ctcggcgcggcactcggtgtcggtgggcacctcacggcgctccgccggacgcaggtgggc
ccgtatggcatcgagcaggcgagcaccctcgaggagctcgcggaggatctccgtctcctc
ccgctcgacgacgcgggccgtgcgctcttcccggtccgcgagctcagcgccaccgaggcc
gcagacgtctcgcacggccgccggatcgacccgagtgaaccggcggaccagcccgtcgca
gccttcgcccccgacggcaccctcgtggcgctgctcgagaatcgcggtgcagcggcgcgc
acgctcctggtcttcgcgcccggcggcaaggagtag
DBGET
integrated database retrieval system
